Research Progress of BAP1 in Structure, Function, and Cancer.

Cancer is an important chronic non-communicable disease that endangers human health and has become the main cause of death of residents around the world in the 21st century. At present, most of the mature treatment methods stay at the level of cell and tissue, which is difficult to fundamentally solve the problem of cancer. Therefore, explaining the pathogenesis of cancer at the molecular level becomes the answer to the key problem of cancer regulation. BRCA-associated protein 1 (brca1- associated protein 1) is a kind of ubiquitination enzyme encoded by the BAP1 gene and composed of 729 amino acids. As a carcinogenic protein, BAP1 can affect the cancer cell cycle and proliferation capacity, mutation, and deletion. For example, depending on catalytic activity, it participates in the regulation of intracellular function through transcription, epigenetic, and DNA damage repair. This article mainly reviews the basic structure and function of BAP1 in cells, its role in cancer development, and cancer-related mutants.

GKK1032B from endophytic Penicillium citrinum induces the apoptosis of human osteosarcoma MG63 cells through caspase pathway activation.

Chemical investigation of the culture extract of an endophytic Penicillium citrinum from Dendrobium officinale, afforded nine citrinin derivatives (1-9) and one peptide-polyketide hybrid GKK1032B (10). The structures of these compounds were determined by spectroscopic methods. The absolute configurations of 1 and 2 were determined for the first time by calculation of electronic circular dichroism (ECD) data. Among them, GKK1032B (10) showed significant cytotoxicity against human osteosarcoma cell line MG63 with an IC50 value of 3.49 µmol·L-1, and a primary mechanistic study revealed that it induced the apoptosis of MG63 cellsvia caspase pathway activation.

Assistance by Routine CT Features Combined With 3D Texture Analysis in the Diagnosis of BRCA Gene Mutation Status in Advanced Epithelial Ovarian Cancer.

PURPOSE: To evaluate the predictive value of routine CT features combined with 3D texture analysis for prediction of BRCA gene mutation status in advanced epithelial ovarian cancer. METHOD: Retrospective analysis was performed on patients with masses occupying the pelvic space confirmed by pathology and complete preoperative images in our hospital, including 37 and 58 cases with mutant type and wild type BRCA, respectively (total: 95 cases). The enrolled patients' routine CT features were analyzed by two radiologists. Then, ROIs were jointly determined through negotiation, and the ITK-SNAP software package was used for 3D outlining of the third-stage images of the primary tumor lesions and obtaining texture features. For routine CT features and texture features, Mann-Whitney U tests, single-factor logistic regression analysis, minimum redundancy, and maximum correlation were used for feature screening, and the performance of individual features was evaluated by ROC curves. Multivariate logistic regression analysis was used to further screen features, find independent predictors, and establish the prediction model. The established model's diagnostic efficiency was evaluated by ROC curve analysis, and the histogram was obtained to conduct visual analysis of the prediction model. RESULTS: Among the routine CT features, the type of peritoneal metastasis, mesenteric involvement, and supradiaphragmatic lymph node enlargement were correlated with BRCA gene mutation (P < 0.05), whereas the location of the peritoneal metastasis (in the gastrohepatic ligament) was not significantly correlated with BRCA gene mutation (P > 0.05). Multivariate logistic regression analysis retained six features, including one routine CT feature and five texture features. Among them, the type of peritoneal metastasis was used as an independent predictor (P < 0.05), which had the highest diagnostic efficiency. Its AUC, accuracy, specificity, and sensitivity were 0.74, 0.79, 0.90, and 0.62, respectively. The prediction model based on the combination of routine CT features and texture features had an AUC of 0.86 (95% CI: 0.79-0.94) and accuracy, specificity, and sensitivity of 0.80, 0.76, and 0.81, respectively, indicating a better performance than that of any single feature. CONCLUSIONS: Both routine CT features and texture features had value for predicting the mutation state of the BRCA gene, but their predictive efficiency was low. When the two types of features were combined to establish a predictive model, the model's predictive efficiency was significantly higher than that of independent features.

Phototransformation of Graphene Oxide on the Removal of Sulfamethazine in a Water Environment.

Graphene oxide (GO) is widely used in various fields and has raised concerns regarding its potential environmental fate and effect. However, there are few studies on its influence on coexisting pollutants. In this study, the phototransformation of GO and coexisting sulfamethazine (SMZ) under UV irradiation was investigated, with a focus on the role of reactive oxygen species. The results demonstrated that GO promoted the degradation of SMZ under UV irradiation. The higher the concentration of GO, the higher the degradation rate of SMZ, and the faster the first-order reaction rate. Two main radicals, ∙OH and 1O2, both contributed greatly in terms of regulating the removal of SMZ. Cl-, SO42-, and pH mainly promoted SMZ degradation by increasing the generation of ∙OH, while humic acid inhibited SMZ degradation due to the reduction of ∙OH. Moreover, after UV illumination, the GO suspension changed from light yellow to dark brown with increasing absorbance at a wavelength of 225 nm. Raman spectra revealed that the ID/IG ratio slightly decreased, indicating that some of the functional groups on the surface of GO were removed under low-intensity UV illumination. This study revealed that GO plays important roles in the photochemical transformation of environmental pollutants, which is helpful for understanding the environmental behaviors and risks of nanoparticles in aquatic environments.

Folic Acid Supplementation in Chinese Peri-conceptional Population: Results from the SPCC Study.

OBJECTIVE: To determine the prevalence and determinants of folic acid (FA) supplementation in Chinese couples planning for pregnancy and in women during early pregnancy. METHODS: This was a cross-sectional study based on the Shanghai PreConception Cohort (SPCC) study. Data on FA supplementation and socio-demographic features were collected using questionnaires. Couples visiting clinics for pre-pregnancy examination and pregnant women at < 14 gestational weeks were recruited in Shanghai, China, between March 2016 and September 2018. RESULTS: Among the pregnancy planners, 42.4% (4,710/11,099) women and 17.1% (1,377/8,045) men used FA supplements, while 93.4% (14,585/15,615) of the pregnant women used FA supplements. FA supplement use was higher in female pregnancy planners who were older ( RR: 1.13, 95% CI: 1.08-1.18), had higher education ( RR: 1.71, 95% CI: 1.53-1.92), and were residing in urban districts ( RR: 1.06, 95% CI: 1.01-1.11) of FA supplementation; female pregnancy planners with alcohol consumption ( RR: 0.95, 95% CI: 0.90-0.99) had lower odds of FA supplementation. In early pregnancy, women with higher educational level ( RR: 1.04, 95% CI: 1.03-1.06), who underwent pre-pregnancy examination ( RR: 1.02, 95% CI: 1.01-1.03) had higher odds of using an FA supplement; older aged ( RR: 0.99, 95% CI: 0.98-0.99), and multigravida ( RR: 0.97, 95% CI: 0.96-0.98) had lower odds of FA supplementation. CONCLUSION: Although the majority of pregnant women took FA supplements, more than half of the women planning for pregnancy did not. Urgent strategies are needed to improve pre-conception FA supplementation.

Phototransformation of zinc oxide nanoparticles and coexisting pollutant: Role of reactive oxygen species.

In this study, the photochemistry of ZnO NPs and their effect on phototransformation of coexisting pollutants (sulfamethazine, SMZ) were systematically investigated under UV illumination. SMZ (40 µM) degradation was accelerated by ZnO NPs, as the observed reaction rate constant (kobs) increased from 0.0809 h-1 to 0.7982 h-1 at the concentration of 5-50 mg/L ZnO NPs. Free radical quenching and quantification experiments indicated the reactive oxygen species, especially the hydroxyl radicals (OH) and singlet oxygen (1O2), made great contributions to SMZ degradation. Moreover, SMZ was prone to be degraded at high pH with kobs reaching upto 0.5734 h-1 at pH 12.0. The presence of Cl- (1000 mM) reduced the SMZ decomposition greatly by 2.4-fold while the effects of SO42- (30 mM) were very limited. Natural organic matter including humic acid and tannic acid both inhibited the degradation of SMZ with kobs decreasing by 35.4-fold and 132-fold, respectively. During the photoreaction process, ZnO NPs fragmented into relative small size pieces obviously along with the release of Zn2+. Finally, the possible cotransformation pathways of ZnO NPs and SMZ were proposed based on SMZ degradation intermediates and the above results. These findings of the present study suggested that the photoreactions of ZnO NPs greatly influenced the transformation of contaminants and ZnO NPs themselves in aquatic environment, which may have significant implications for the fate assessment of NPs and environmental pollutants.

Sorption of fluoroquinolones to nanoplastics as affected by surface functionalization and solution chemistry.

Microplastics have attracted much attention in recent years as they can interact with pollutants in water environment. However, nanoplastics (NPs) with or without the surface functionalization modification have not been thoroughly explored. Here, the sorption behaviors of two fluoroquinolones (FQs), including norfloxacin (NOR) and levofloxacin (LEV) on polystyrene NPs (nano-PS) and carboxyl-functionalized polystyrene NPs (nano-PS-COOH) were investigated. The results showed that sorption isotherms were nonlinear and well fitted by Langmuir model. The sorption capacities of NOR and LEV on nano-PS-COOH were higher than those on nano-PS, and their physical interactions, including polar interaction, electrostatic interaction and hydrogen bonding may be the dominant mechanisms. Moreover, the increase of pH firstly increased the sorption of two FQs on NPs and then decreased because NOR and LEV had a reverse charge at different pH values. Salinity and dissolved organic matter both inhibited the sorption process. These findings show that NPs with or without the surface functionalization modification have different sorption behaviors for environmental pollutants, which deserve our further concern.

Periodic density functional theory analysis of direct methane conversion into ethylene and aromatic hydrocarbons catalyzed by Mo4C2/ZSM-5.

Mo/ZSM-5-catalyzed methane conversion into aromatic hydrocarbons is an important reaction to produce ethylene and benzene, but the detailed reaction mechanism has not been investigated due to its high complexity. In the present study, density functional theory combined with a periodic model was used to investigate the reaction mechanism of direct methane conversion into aromatic hydrocarbons catalyzed by Mo/ZSM-5. The calculation results show that the active phase for Mo is Mo4C2 instead of MoOx. The whole reaction processes processed via the following steps: the C-H bond in methane was first activated by Mo4C2 with an energy barrier of 1.01 eV and then converted into ethylene species via the coupling of two CH3 species as well as two successive dehydrogenation steps (2CH3 → C2H6 → C2H4 + 2H). The rate-controlling step for the processes to form ethylene is the coupling of two methyl species with a barrier of 1.22 eV. The produced ethylene species then react with each other to produce C6H8via the reaction of 3C2H4 → C3H8 + 2H2, and molecular benzene is formed by successive dehydrogenation of C6H8. The rate-limiting step for benzene formation from ethylene is the cyclization step of chain C6H8 with an energy barrier of 1.21 eV. Additionally, molecular propane (C3H8) is formed by the reaction of C2H4 + CH4 → C3H8, and the controlling step C3H7 + H → C3H8 has a barrier of 1.46 eV. Molecular C10H12 is produced via coupling of C6H8 and C2H4, where the limiting step is the dehydrogenation step of C8H12 with an energy barrier of 1.44 eV. Our present calculation results indicate that the selectivity of benzene was the largest among the possible products, that is, C2H4, C3H6, C6H6 and C10H12, based on the corresponding controlling step barrier. Importantly, the rate-controlling step for the whole reaction process from methane to benzene is the dissociative adsorption of methane (CH4 → CH3 + H) with an energy barrier of 1.83 eV when considering entropy contribution. The present study may help people design a good catalyst for the formation of benzene from methane; in other words, the catalyst should have a good ability to activate the C-H bond of molecular methane.

[Nitrification of biological soil crusts and soil system during drought process and its response to temperature and moisture: A case study in the Shapotou region, Northwest China].

Two types of soil covered by biological soil crusts (BSCs) , i.e. moss and algae, and moving sand in the natural vegetation area at the southeast fringe of the Tengger Desert were collected intactly. They were incubated continuously for 20 days under two different temperatures (15 degrees C and 25 degrees C) and moistures (10% and 25%) condition in the laboratory, and soil NO3(-)-N contents were measured after 1, 2, 5, 8, 12, 20 days of incubation and net nitrification rate was evaluated during dehydration. The results showed that NO3(-)-N content of the moss-covered soil (2.29 mg x kg(-1)) was higher than that of the algae-covered soil (1.84 mg x kg(-1)) and sand (1.59 mg x kg(-1)). Net nitrification rate of the three soil types ranged from -3.47 to 2.97 mg x kg(-1) x d(-1). For the moss-covered soil and algae-covered soil at 10% and 25% moisture levels, the net nitrification rates at 15 degrees C were 75.1%, 0.7% and 99.1%, 21.3% higher than those at 25 degrees C, respectively. Also, the net nitrification rates at 15 degrees C and 10% moisture levels were 193.4% and 107.3% higher than those at 25 degrees C and 25% moisture levels, respectively. The results suggested that regardless of soil moisture increasing or decreasing under the global warming senior, the net nitrification rate of BSCs-soil system in the desert would probably be limited to some extent during drought process.

Antagonistic roles of Dmrt1 and Foxl2 in sex differentiation via estrogen production in tilapia as demonstrated by TALENs.

Transcription activator-like effector nucleases (TALENs) are a powerful approach for targeted genome editing and have been proved to be effective in several organisms. In this study, we reported that TALENs can induce somatic mutations in Nile tilapia, an important species for worldwide aquaculture, with reliably high efficiency. Six pairs of TALENs were constructed to target genes related to sex differentiation, including dmrt1, foxl2, cyp19a1a, gsdf, igf3, and nrob1b, and all resulted in indel mutations with maximum efficiencies of up to 81% at the targeted loci. Effects of dmrt1 and foxl2 mutation on gonadal phenotype, sex differentiation, and related gene expression were analyzed by histology, immunohistochemistry, and real-time PCR. In Dmrt1-deficient testes, phenotypes of significant testicular regression, including deformed efferent ducts, degenerated spermatogonia or even a complete loss of germ cells, and proliferation of steroidogenic cells, were observed. In addition, disruption of Dmrt1 in XY fish resulted in increased foxl2 and cyp19a1a expression and serum estradiol-17ß and 11-ketotestosterone levels. On the contrary, deficiency of Foxl2 in XX fish exhibited varying degrees of oocyte degeneration and significantly decreased aromatase gene expression and serum estradiol-17ß levels. Some Foxl2-deficient fish even exhibited complete sex reversal with high expression of Dmrt1 and Cyp11b2. Furthermore, disruption of Cyp19a1a in XX fish led to partial sex reversal with Dmrt1 and Cyp11b2 expression. Taken together, our data demonstrated that TALENs are an effective tool for targeted gene editing in tilapia genome. Foxl2 and Dmrt1 play antagonistic roles in sex differentiation in Nile tilapia via regulating cyp19a1a expression and estrogen production.

Inhibition of the Wnt palmitoyltransferase porcupine suppresses cell growth and downregulates the Wnt/ß-catenin pathway in gastric cancer.

Similarly to the Wnt protein palmitoyltransferase, porcupine (PPN) is essential to the activation of the Wnt/ß-catenin signaling pathway. However, little is known about the role of PPN activity in human gastric cancer, one of the most common causes of cancer-related mortality. Real-time quantitative PCR was used to detect the expression levels of PPN in paired gastric cancer tissues. Cell proliferation, migration and invasion assays were performed following treatment using a newly developed small molecule PPN inhibitor (inhibitors of Wnt production, IWP-2) in the gastric cancer MKN28 cell line. Expression of downstream target genes and transcriptional activity of the Wnt/ß-catenin signaling pathway were examined following IWP-2 treatment in MKN28. We identified that PPN was overexpressed in human gastric cancer tissue samples and cell lines. Following treatment of the gastric cancer cell line MKN28 with IWP-2, we detected that IWP-2 decreased MKN28 cell proliferation, migration and invasion, and elevated caspase 3/7 activity. Further analysis demonstrated that IWP-2 downregulated the transcriptional activity of the Wnt/ß-catenin signaling pathway and downregulated the expression levels of downstream Wnt/ß-catenin target genes in MKN28 cells. As current Wnt pathway-targeting strategies used for anticancer therapy have mainly focused on Wnt-receiving cells, our data shed light on the potential use of Wnt palmitoyltransferase PPN inhibitors to abrogate Wnt production in Wnt-producing cells, thus providing a potential therapeutic option for gastric cancer.