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1.
Parasitol Res ; 121(10): 2793-2802, 2022 Oct.
Article in English | MEDLINE | ID: mdl-35951118

ABSTRACT

The genetic diversity and differentiation of four geographic populations of Neoschongastia gallinarum were evaluated using concatenated mitochondrial gene sequences (pCOI, pCOII, and pND5). Based on the results, the N. gallinarum populations had high genetic diversity and strong ecological adaptability. Genetic differentiation among paired populations calculated using concatenated mitochondrial gene sequences revealed that geographic isolation resulted in genetic differentiation among the populations of N. gallinarum, and gene flow between populations associated with human trade activities. Systematic development and molecular variance based on haplotypes revealed that genetic variation existed in different haplotypes; however, no clear rule related to geographic region was found. Further, genetic variation was mainly derived from individuals within the population. A neutral test based on concatenated mitochondrial gene sequences and nucleotide pair differences revealed that N. gallinarum did not experience an obvious population expansion in recent historical periods. Accordingly, the population size was relatively stable.


Subject(s)
DNA, Mitochondrial , Genetics, Population , Trombiculidae , Animals , China , DNA, Mitochondrial/chemistry , DNA, Mitochondrial/genetics , Genetic Variation , Haplotypes , Phylogeny , Trombiculidae/genetics
2.
Vet Parasitol ; 299: 109566, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34509125

ABSTRACT

Toxoplasma gondii, an intracellular apicomplexan protozoan parasite, can infect all warm-blooded animals. Infected swine are considered one of the most important sources of T. gondii infection in humans. Rapidly and effectively diagnosing T. gondii infection in swine is essential. PCR-based diagnostic tests have been fully developed, and very sensitive and specific PCR is crucial for the diagnosis of swine toxoplasmosis. In this study, we used the T. gondii dense granule protein 14 (GRA14) gene as a target to design specific primers and established a high-specificity and high-sensitivity PCR detection method for swine toxoplasmosis. Notably, this PCR method could detect T. gondii tachyzoite DNA in the acute infection phase. The GRA14 gene PCR assay detected a minimum of 2.35 tachyzoites of T. gondii and can be used for T. gondii detection in blood, tissue, semen, urine and waste feed specimens. A total of 5462 blood specimens collected from pigs in 5 provinces and autonomous regions in southern China during 2016-2017 were assessed by the newly established GRA14 gene PCR method. The overall T. gondii infection rate was 18.9 % (1033/5462). According to the statistical analysis of different regions in China, the positive rates of swine toxoplasmosis from 2016 to 2017 were highest in the Shaanxi, Fujian and Guangdong areas, at 31.7 % (44/139), 21.9 % (86/391) and 18.8 % (874/4645), respectively. Specimens collected in 2017 had a higher positive rate (19.1 %) than those collected in 2016 (16.1 %). In addition, specimens collected in autumn (39.4 %), spring (22.8 %) and winter (18.2 %) had higher positive rates than those collected in summer (3.8 %). These results indicate that the new PCR method based on the T. gondii GRA14 gene has utility for the diagnosis of swine toxoplasmosis and can facilitate the diagnosis of toxoplasmosis in clinical laboratories.


Subject(s)
Swine Diseases , Toxoplasma , Toxoplasmosis, Animal , Toxoplasmosis , Animals , Animals, Domestic , DNA, Protozoan/genetics , Polymerase Chain Reaction/veterinary , Sensitivity and Specificity , Swine , Swine Diseases/diagnosis , Swine Diseases/epidemiology , Toxoplasma/genetics , Toxoplasmosis, Animal/diagnosis , Toxoplasmosis, Animal/epidemiology
3.
Microb Pathog ; 151: 104751, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33482261

ABSTRACT

Blastocystis is one of the most common causative agents of intestinal diseases, which can cause enteric diseases in animals and humans. However, limited data is available on the prevalence or subtypes of Blastocystis infections in farmed pigs in southern China. In this study, a total of 396 fecal samples were collected from farmed pigs in three provinces in southern China in 2016, and screened for Blastocystis by PCR amplification of the small subunit rRNA (SSU rRNA) gene fragment. One hundred and seventy (42.93%) of the examined fecal samples were detected Blastocystis-positive, and two known zoonotic subtypes ST1 and ST5 were identified, with ST5 being the predominate subtype. Moreover, gender, age and region were considered as risk factors that associated with Blastocystis infection in farmed pigs. The present study revealed the prevalence and subtypes of Blastocystis infections in farmed pigs in southern China, which provided essential data for the control of Blastocystis infections in pigs, other animals and humans in China.


Subject(s)
Blastocystis Infections , Blastocystis , Animals , Blastocystis/genetics , Blastocystis Infections/epidemiology , Blastocystis Infections/veterinary , China/epidemiology , Feces , Genetic Variation , Phylogeny , Prevalence , Swine
4.
Parasitol Res ; 119(10): 3339-3345, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32827102

ABSTRACT

Genetic variations in the 18S ribosomal DNA (18S), 28S ribosomal DNA (28S), second internal transcribed spacer of ribosomal DNA (ITS2), and mitochondrial cytochrome c oxidase subunit 1 (cox1) of Neoschoengastia gallinarum collected from subtropical China were examined. First, a portion of the 18S (p18S), a portion of the 28S (p28S), and the complete ITS2 were separately amplified from individual mites and sequenced. The lengths of the sequences of p18S, p28S, and ITS2 were found to be 1379 bp, 3465~3468 bp, and 200 bp, respectively. The intraspecific sequence variation was 0~0.1% for p28S and 0~1.6% for ITS2, though no variation was observed for p18S, suggesting conservation of rDNA sequences. Second, a portion of the mitochondrial cox1 gene (pcox1) of N. gallinarum was analyzed. The length of the pcox1 sequence is 460 bp, and two distinct groups were observed in N. gallinarum. All pcox1 sequences in group I were identical, and there was only one nucleotide transition observed in group II; however, 7.0~7.2% variations between the two groups were observed, suggesting that two genotypes of N. gallinarum: genotype I and genotype II. Phylogenetic analyses based on pcox1 sequences indicated that N. gallinarum isolates (genotype I or genotype II) clustered into one branch; according to cox1 sequence analysis of Trombiculidae, Walchia hayashii is the closest species. The present study shows that ITS2 rDNA sequence can act as marker for the identification of N. gallinarum samples. Furthermore, analysis of the mitochondrial pcox1 sequence suggests the existence of two genotypes, which has implications for further studies of the ecology and population genetic structures of N. gallinarum.


Subject(s)
Cyclooxygenase 1/genetics , DNA, Ribosomal/genetics , Trombiculidae/genetics , Animals , China , DNA, Mitochondrial/genetics , Genetic Variation , Genotype , Phylogeny , Sequence Analysis, DNA , Trombiculidae/classification
5.
Article in English | MEDLINE | ID: mdl-31867292

ABSTRACT

In this study, we characterized the role of amylo-alpha-1,6-glucosidase (Aa16GL) in the biology and infectivity of Toxoplasma gondii, using Aa16GL-deficient parasites of type I RH and type II Prugniaud (Pru) strains. The subcellular localization of Aa16GL protein was characterized by tagging a 3 × HA to the 3' end of the Aa16GL gene endogenous locus. Immunostaining of the expressed Aa16GL protein revealed that it is located in several small cytoplasmic puncta. Functional characterization of ΔAa16GL mutants using plaque assay, egress assay and intracellular replication assay showed that parasites lacking Aa16GL exhibit a slight reduction in the growth rate, but remained virulent to mice. Although PruΔAa16GL tachyzoites retained the ability to differentiate into bradyzoites in vitro, they exhibited slight reduction in their ability to form cysts in mice. These findings reveal new properties of Aa16GL and suggest that while it does not have a substantial role in mediating T. gondii infectivity, this protein can influence the formation of parasite cysts in mice.


Subject(s)
Glycogen Debranching Enzyme System/metabolism , Protozoan Proteins/metabolism , Toxoplasma/metabolism , Toxoplasmosis/parasitology , Animals , CRISPR-Cas Systems , Female , Gene Knockdown Techniques , Glycogen Debranching Enzyme System/genetics , Mice , Mutation , Protozoan Proteins/genetics , Toxoplasma/genetics , Toxoplasma/ultrastructure , Toxoplasmosis/mortality , Toxoplasmosis/pathology , Virulence
6.
Infect Genet Evol ; 66: 52-56, 2018 12.
Article in English | MEDLINE | ID: mdl-30218706

ABSTRACT

Enterocytozoon bieneusi is one of the most important causative agents of microsporidiosis, causing diarrhoea the symptoms of enteric disease in humans and animals. Although there is some information on the prevalence and genotypes of E. bieneusi in China, there is still a lack of data in pigs in southern China. In the present study, a total of 396 faecal specimens were collected from pigs in Zhejiang, Guangdong and Yunnan provinces in southern China, and were examined by nested PCR amplification of the ribosomal internal transcribed spacer (ITS) for the prevalence and genotypes of E. bieneusi. The overall prevalence of E. bieneusi in pigs was 31.57% (125/396), forming 15 genotypes, including 9 known genotypes (EbpC, EbpA, D, G, H, PigEBITS5, Henan-IV, KIN-1, CHS5) and 6 novel genotypes (GD1, ZJ1, ZJ2, YN1, YN2 and YN3), which were all clustered into Group 1. Moreover, multilocus sequence typing (MLST) showed that 6, 3, 4 and 5 types were identified in MS1, MS3, MS7 and MS4 loci, respectively, representing four multilocus genotypes (MLGs), designated as MLGs novel-1 to novel-4 in the present study. This is the first detailed study of E. bieneusi using MLST in pigs in southern China, which extended information about the distribution of E. bieneusi genotypes in China.


Subject(s)
Enterocytozoon/genetics , Genotype , Microsporidiosis/veterinary , Swine Diseases/epidemiology , Swine Diseases/microbiology , Animals , China/epidemiology , Enterocytozoon/classification , Female , Male , Multilocus Sequence Typing , Phylogeny , Prevalence , Swine
7.
Mitochondrial DNA A DNA Mapp Seq Anal ; 29(1): 132-135, 2018 01.
Article in English | MEDLINE | ID: mdl-28141958

ABSTRACT

Toxocara cati (cat roundworm) is a common parasitic nematode that infects humans and other hosts, causing toxocariasis. Although its significance as a pathogen, the epidemiology, genetics and biology of T. cati remain poorly understand in China. In the present study, genetic variation in mitochondrial (mt) cytochrome c oxidase subunit 1 (cox1) gene and internal transcribed spacer (ITS) of rDNA region among T. cati in Guangdong province, subtropical China was examined. A portion of the cox1 (pcox1) and the complete ITS (ITS1 + 5.8S rDNA + ITS2) were amplified separately from individual worms by polymerase chain reaction (PCR) and amplicons were then subjected to sequencing from both directions. The length of the sequences of pcox1, ITS-1, and ITS-2 were 308 bp, 462 bp, and 335 bp, respectively. The intra-specific sequence variations within T. cati were 0-3.6% for pcox1, 0-2.4% for ITS-1, and 0-2.7% for ITS-2. However, the inter-specific sequence differences were significantly higher, being 8.6%, 10.7%, and 11.3% for pcox1, ITS-1, and ITS-2, respectively. Phylogenetic analyses based on the pcox1 sequences indicated that all the isolates in Guangdong province were in genus Toxocara, which confirmed that these parasites represent T. cati. The molecular approach employed provides a powerful tool for elucidating the epidemiology, genetics, and biology of zoonotic T. cati in China and elsewhere.


Subject(s)
Genes, Mitochondrial , Genetic Variation , Phylogeny , Toxocara/genetics , Animals , China , DNA, Helminth , DNA, Mitochondrial , Electron Transport Complex IV/genetics , Sequence Analysis, DNA , Toxocara/metabolism
8.
Vet Parasitol ; 243: 79-84, 2017 Aug 30.
Article in English | MEDLINE | ID: mdl-28807316

ABSTRACT

Avian coccidiosis is caused by multiple species of the apicomplexan protozoan, Eimeria, and is one of the most economically devastating enteric diseases for the poultry industry worldwide. Host immunity to Eimeria infection, however, is relatively species-specific. The ability to immunize chickens against different species of Eimeria using a single vaccine will have a major beneficial impact on commercial poultry production. In this paper, we describe the molecular cloning, purification, and vaccination efficacy of a novel Eimeria vaccine candidate, elongation factor-1α (EF-1α). One day-old broiler chickens were given two subcutaneous immunizations one week apart with E. coli-expressed E. tenella recombinant (r)EF-1α protein and evaluated for protection against challenge infection with E. tenella or E. maxima. rEF-1α-vaccinated chickens exhibited increased body weight gains, decreased fecal oocyst output, and greater serum anti-EF-1α antibody levels following challenge infection with either E. tenella or E. maxima compared with unimmunized controls. Vaccination with EF-1α may represent a new approach to inducing cross-protective immunity against avian coccidiosis in the field.


Subject(s)
Chickens/parasitology , Coccidiosis/veterinary , Eimeria tenella/immunology , Peptide Elongation Factor 1/immunology , Poultry Diseases/prevention & control , Protozoan Vaccines/immunology , Animals , Antigens, Protozoan/immunology , Chickens/immunology , Coccidiosis/parasitology , Coccidiosis/prevention & control , Escherichia coli/genetics , Escherichia coli/metabolism , Male , Poultry Diseases/parasitology , Recombinant Proteins/immunology , Vaccination/veterinary , Weight Gain
9.
Korean J Parasitol ; 55(3): 333-336, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28719959

ABSTRACT

Avian trichomoniasis caused by Trichomonas gallinae is a serious protozoan disease worldwide. The domestic pigeon (Columba livia domestica) is the main host for T. gallinae and plays an important role in the spread of the disease. Based on the internal transcribed spacers of nuclear ribosomal DNA of this parasite, a pair of primers (TgF2/TgR2) was designed and used to develop a PCR assay for the diagnosis of T. gallinae infection in domestic pigeons. This approach allowed the identification of T. gallinae, and no amplicons were produced when using DNA from other common avian pathogens. The minimum amount of DNA detectable by the specific PCR assay developed in this study was 15 pg. Clinical samples from Guangzhou, China, were examined using this PCR assay and a standard microscopy method, and their molecular characteristics were determined by phylogenetic analysis. All of the T. gallinae-positive samples detected by microscopic examination were also detected as positive by the PCR assay. Most of the samples identified as negative by microscopic examination were detected as T. gallinae positive by the PCR assay and were confirmed by sequencing. The positive samples of T. gallinae collected from Guangzhou, China, were identified as T. gallinae genotype B by sequencing and phylogenetic analyses, providing relevant data for studying the ecology and population genetic structures of trichomonads and for the prevention and control of the diseases they cause.


Subject(s)
Bird Diseases/diagnosis , Bird Diseases/parasitology , Columbidae/parasitology , Phylogeny , Polymerase Chain Reaction/methods , Trichomonas Infections/diagnosis , Trichomonas Infections/veterinary , Trichomonas/genetics , Trichomonas/isolation & purification , Animals , DNA, Protozoan/analysis , DNA, Protozoan/genetics , DNA, Ribosomal/analysis , DNA, Ribosomal/genetics , Genotype , Sequence Analysis, DNA , Trichomonas Infections/parasitology
10.
Parasitol Res ; 116(3): 1023-1028, 2017 Mar.
Article in English | MEDLINE | ID: mdl-28124135

ABSTRACT

Coccidiosis caused by protozoan parasites of the genus Eimeria has a severe economic impact on commercial production worldwide. Micronemes of Eimeria play important roles in invading intestinal cell processes. In this study, the DNA vaccine expressing Eimeria tenella microneme protein 3 (EtMIC3) was constructed to evaluate its immune protective effect against E. tenella infection in chickens. The results demonstrated that chickens immunized with pVAX-EtMIC3 produced strong immune responses in the body, as shown by significant lymphocyte proliferation, cytokine production, and antibody responses. The average body weight gains of chickens in all the vaccinated groups were higher than those of non-vaccinated and challenged groups. In general, oocyst shedding was reduced, and bloody feces and gut lesion scores decreased. In addition, the survival rate of the immunized chickens increased compared to that of the unvaccinated and challenged control chickens. In summary, this study indicated that pVAX-EtMIC3 could induce protective immune effects against coccidiosis and that EtMIC3 is a potential vaccine candidate against coccidiosis.


Subject(s)
Coccidiosis/veterinary , Eimeria tenella/immunology , Poultry Diseases/prevention & control , Protozoan Proteins/immunology , Protozoan Vaccines/immunology , Animals , Antibodies, Protozoan/immunology , Chickens/parasitology , Coccidiosis/immunology , Coccidiosis/parasitology , Coccidiosis/prevention & control , Drug Evaluation , Eimeria tenella/genetics , Immunization , Oocysts/immunology , Plasmids/genetics , Plasmids/metabolism , Poultry Diseases/immunology , Poultry Diseases/parasitology , Protozoan Proteins/administration & dosage , Protozoan Proteins/genetics , Protozoan Vaccines/administration & dosage , Protozoan Vaccines/genetics , Vaccination , Vaccines, DNA/administration & dosage , Vaccines, DNA/genetics , Vaccines, DNA/immunology
11.
Exp Parasitol ; 164: 79-83, 2016 May.
Article in English | MEDLINE | ID: mdl-26921717

ABSTRACT

The excretion frequencies of cecal and intestinal droppings of Chinese Lingnan yellow chickens were observed for 10 consecutive days. The chickens were then orally inoculated with a precocious line of Eimeria necatrix, and the oocysts present in the cecal and intestinal droppings were separately collected and monitored using the McMaster method. The results showed that the excretion frequency of cecal droppings was significantly lower than that of intestinal droppings, and the oocysts of E. necatrix were distributed primarily in the cecal droppings. This distribution affects the homogeneity of the second and third generation of oocysts ingested by the chickens and therefore affects the immune effect observed during E. necatrix immunization. To artificially strengthen the immunologic homogeneity against E. necatrix, a method of artificially strengthening the second immunization was applied, and the immune effect was evaluated based on oocyst excretion, body weight gain, fecal scores, intestinal lesion scores and survival percentages. The results showed that no significant intestinal damage was caused by immunization reactions in the chickens. In addition, the number of excreted oocysts in the immunized chicken groups could be significantly increased, and the immunologic homogeneity of the immunized chickens could be improved by artificially strengthening the second immunization, which could in turn improve the immune protective effect.


Subject(s)
Chickens/parasitology , Coccidiosis/veterinary , Eimeria/isolation & purification , Immunization/veterinary , Poultry Diseases/parasitology , Animals , Cecum/parasitology , Coccidiosis/immunology , Coccidiosis/parasitology , Coccidiosis/prevention & control , Eimeria/immunology , Feces/parasitology , Immunization, Secondary/veterinary , Intestines/parasitology , Intestines/pathology , Oocysts , Poultry Diseases/immunology , Poultry Diseases/prevention & control , Random Allocation
12.
Parasitol Res ; 115(3): 1253-62, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26666886

ABSTRACT

Hymenolepis nana, commonly known as the dwarf tapeworm, is one of the most common tapeworms of humans and rodents and can cause hymenolepiasis. Although this zoonotic tapeworm is of socio-economic significance in many countries of the world, its genetics, systematics, epidemiology, and biology are poorly understood. In the present study, we sequenced and characterized the complete mitochondrial (mt) genome of H. nana. The mt genome is 13,764 bp in size and encodes 36 genes, including 12 protein-coding genes, 2 ribosomal RNA, and 22 transfer RNA genes. All genes are transcribed in the same direction. The gene order and genome content are completely identical with their congener Hymenolepis diminuta. Phylogenetic analyses based on concatenated amino acid sequences of 12 protein-coding genes by Bayesian inference, Maximum likelihood, and Maximum parsimony showed the division of class Cestoda into two orders, supported the monophylies of both the orders Cyclophyllidea and Pseudophyllidea. Analyses of mt genome sequences also support the monophylies of the three families Taeniidae, Hymenolepididae, and Diphyllobothriidae. This novel mt genome provides a useful genetic marker for studying the molecular epidemiology, systematics, and population genetics of the dwarf tapeworm and should have implications for the diagnosis, prevention, and control of hymenolepiasis in humans.


Subject(s)
Genome, Mitochondrial , Hymenolepiasis/parasitology , Hymenolepis nana/genetics , Zoonoses/parasitology , Amino Acid Sequence , Animals , Base Sequence , Bayes Theorem , Cestoda/classification , Cestoda/genetics , DNA, Mitochondrial/chemistry , DNA, Mitochondrial/genetics , Gene Order , Genetic Markers , Genome, Mitochondrial/genetics , Humans , Hymenolepiasis/transmission , Hymenolepis diminuta/classification , Hymenolepis diminuta/genetics , Hymenolepis nana/classification , Phylogeny , RNA, Ribosomal/chemistry , RNA, Ribosomal/genetics , RNA, Transfer/genetics
13.
Mitochondrial DNA A DNA Mapp Seq Anal ; 27(6): 4160-4161, 2016 11.
Article in English | MEDLINE | ID: mdl-25630743

ABSTRACT

In the present study, the complete mitochondrial DNA (mtDNA) sequence of Raillietina tetragona was sequenced and its gene contents and genome organizations was compared with that of other tapeworm. The complete mt genome sequence of R. tetragona is 14,444 bp in length. It contains 12 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and two non-coding region. All genes are transcribed in the same direction and have a nucleotide composition high in A and T. The contents of A + T of the complete mt genome are 71.4% for R. tetragona. The R. tetragona mt genome sequence provides novel mtDNA marker for studying the molecular epidemiology and population genetics of Raillietina and has implications for the molecular diagnosis of chicken cestodosis caused by Raillietina.


Subject(s)
Cestoda/genetics , Chickens , Mitochondria/genetics , Poultry Diseases/parasitology , Sequence Analysis, DNA/methods , Animals , Base Composition , Cestoda/isolation & purification , Gene Order , Genome Size , Genome, Mitochondrial , Open Reading Frames , RNA, Ribosomal/genetics , RNA, Transfer/genetics
14.
Mitochondrial DNA A DNA Mapp Seq Anal ; 27(6): 4646-4650, 2016 11.
Article in English | MEDLINE | ID: mdl-26642941

ABSTRACT

Hymenolepis nana is a common tapeworm that parasitizes in the small intestine of rodent animals and humans. The present study examined the sequence diversity of three mitochondrial (mt) genes namely NADH dehydrogenase subunits 5 (nad5), small subunit ribosomal RNA (rrnS), and ATPase subunit 6 (atp6) of H. nana from mice in different geographical regions of China. A part of the nad5 (pnad5), complete rrnS and atp6 genes were amplified separately from individual H. nana isolates using polymerase chain reaction (PCR) and then sequenced. The sequences of pnad5, rrnS, and atp6 were 710 bp, 704-711 bp, and 516 bp in length, respectively. The A + T contents of the sequences were 70.1-73.5% (pnad5), 70.1-71.7% (rrnS), and 76.6-77.9% (atp6). Sequence variation within H. nana was 0-1.4% for atp6, 0-1.7% for rrnS, and 0-0.7% for pnad5. The inter-specific sequence differences between H. nana and Hymenolepis diminuta were significantly higher, which was 31.6-31.7% (pnad5), 16.1-17.6% (rrnS), and 26.5-27.1% (atp6). Phylogenetic analysis based on the combined three sequences using the maximum parsimony (MP) method supported that H. nana is a species complex or "cryptic" species. These findings demonstrated clearly the usefulness of the three mtDNA sequences for population genetics and systematic studies of H. nana of human and animal health significance.


Subject(s)
Genes, Mitochondrial , Genetic Variation , Hymenolepis nana/genetics , Adenosine Triphosphatases/genetics , Animals , Base Composition , China , DNA, Mitochondrial/genetics , DNA, Mitochondrial/isolation & purification , DNA, Mitochondrial/metabolism , Hymenolepis nana/classification , Mice , NADH Dehydrogenase/genetics , Phylogeny , Phylogeography , RNA, Ribosomal/genetics , Sequence Analysis, DNA
15.
Parasitol Res ; 114(7): 2697-704, 2015 Jul.
Article in English | MEDLINE | ID: mdl-25899327

ABSTRACT

In the present study, near-complete mitochondrial (mt) genome sequences for Schistosoma japonicum from different regions in the Philippines and Japan were amplified and sequenced. Comparisons among S. japonicum from the Philippines, Japan, and China revealed a geographically based length difference in mt genomes, but the mt genomic organization and gene arrangement were the same. Sequence differences among samples from the Philippines and all samples from the three endemic areas were 0.57-2.12 and 0.76-3.85 %, respectively. The most variable part of the mt genome was the non-coding region. In the coding portion of the genome, protein-coding genes varied more than rRNA genes and tRNAs. The near-complete mt genome sequences for Philippine specimens were identical in length (14,091 bp) which was 4 bp longer than those of S. japonicum samples from Japan and China. This indel provides a unique genetic marker for S. japonicum samples from the Philippines. Phylogenetic analyses based on the concatenated amino acids of 12 protein-coding genes showed that samples of S. japonicum clustered according to their geographical origins. The identified mitochondrial indel marker will be useful for tracing the source of S. japonicum infection in humans and animals in Southeast Asia.


Subject(s)
Genome, Helminth , Genome, Mitochondrial , Schistosoma japonicum/genetics , Schistosomiasis japonica/parasitology , Animals , Base Sequence , China , Gene Order , Helminth Proteins/genetics , Humans , INDEL Mutation , Japan , Molecular Sequence Data , Philippines , Phylogeny , Schistosoma japonicum/classification , Schistosoma japonicum/isolation & purification , Sequence Analysis, DNA
16.
Mitochondrial DNA ; 26(4): 501-4, 2015 Aug.
Article in English | MEDLINE | ID: mdl-24409849

ABSTRACT

Passalurus ambiguus is a common pinworm which parasitizes in the caecum and colon of rabbits. This study examined genetic variability among P. ambiguus isolated from naturally infected rabbits in four different provinces in China. The partial mitochondrial (mt) cytochrome c oxidase subunit 1 (pcox1), cytochrome b (pcytb) and NADH dehydrogenase subunits 1 and 5 (pnad1 and pnad5) were amplified separately from individual nematodes by PCR and sequenced. The results showed that pcox1, pcytb, pnad1 and pnad5 were 714, 663, 645 and 546 bp in length, respectively. The intra-specific sequence variations within P. ambiguus were 0-1.1% for pcox1, 0-1.2% for pcytb, 0-0.6% for pnad1 and 0-1.3% for pnad5, whereas inter-specific sequence differences with other members of the Oxyuridae were 16.2-17.3% for pcox1, 27.8-30.4% for pcytb, 20.2-24.0% for pnad1 and 27.1-30.3% for pnad5. Phylogenetic analyses using Bayesian inference (BI), maximum likelihood (ML) and maximum parsimony (MP) methods, based on the combined sequences of the four partial mtDNA sequences, revealed that all the P. ambiguus samples form monophyletic groups. This study demonstrated the existence of low-level intra-specific variation in cox1, cytb, nad1 and nad5 genes among P. ambiguus isolates from different geographic regions in China, and these four mtDNA sequences can be used as genetic markers for the population genetic studies of P. ambiguus, as well as the differentiation of P. ambiguus from other oxyurid nematodes.


Subject(s)
DNA, Helminth/chemistry , DNA, Mitochondrial/chemistry , Enterobius/genetics , Genes, Mitochondrial , Genetic Variation , Animals , Bayes Theorem , China , Electron Transport Complex IV/chemistry , Electron Transport Complex IV/genetics , Enterobius/isolation & purification , Genetic Markers , Likelihood Functions , Molecular Sequence Data , NADH Dehydrogenase/chemistry , NADH Dehydrogenase/genetics , Phylogeography , Rabbits/parasitology , Sequence Analysis, DNA
17.
Avian Dis ; 58(3): 367-72, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25518429

ABSTRACT

In this study, the biologic characteristics of one experimental precocious strain of Eimeria acervulina and seven field isolates from different geographic locations in China were compared, and the immune efficacy of two precocious strains against coccidiosis in chickens was assessed to explore their potential use as coccidiosis vaccines. All the different strains were purified by single oocyst separation and their monospecificity was confirmed using E acervulina-specific PCR assays. The average sizes of E. acervulina oocysts were 18.28-20.19 X 14.09-14.79 microm and the shape indexes were from 1.28 to 1.40. The prepatent periods ranged from 93 to 115 hr, except for the Heyuan precocious strain (HYP; 75 hr). Chickens infected with Huadu field strain (GHD) produced the highest oocyst output whereas HYP induced the lowest level. When inoculated with 50,000 sporulated oocysts or more, the average weight gains of infected chickens were reduced, with apparent clinical symptoms. To assess the immunogenicity of precocious strains HYP and Baoding (BDP), birds were orally immunized and challenged with seven different field strains of E. acervulina. Body weight gain, fecal oocyst output, and gut lesion scores were compared to evaluate their vaccine potential. The results showed that the average body weight gains of chickens in all the vaccinated and challenged groups were higher than those of nonvaccinated and challenged groups. In general, oocyst shedding was reduced 34.39%-95.31% and gut lesion scores decreased 31.03%-86.21% compared with unvaccinated and challenged control chickens. In summary, this study indicated that the precocious strains of E. acervulina could induce a protective immune effect with various responses against coccidiosis caused by different field strains.


Subject(s)
Coccidiosis/veterinary , Eimeria/immunology , Poultry Diseases/immunology , Poultry Diseases/parasitology , Animals , Antibodies, Protozoan/immunology , Chickens , China , Coccidiosis/immunology , Coccidiosis/parasitology , Coccidiosis/prevention & control , Eimeria/classification , Eimeria/growth & development , Eimeria/pathogenicity , Oocysts/classification , Oocysts/growth & development , Oocysts/immunology , Poultry Diseases/prevention & control , Vaccines/administration & dosage , Vaccines/immunology , Virulence
18.
ScientificWorldJournal ; 2014: 147963, 2014.
Article in English | MEDLINE | ID: mdl-25197691

ABSTRACT

The characteristics of the intergenic spacer rDNAs (IGS rDNAs) of Oesophagostomum dentatum and O. quadrispinulatum isolated from pigs in different geographical locations in Mainland China were determined, and the phylogenetic relationships of the two species were reconstructed using the IGS rDNA sequences. The organization of the IGS rDNA sequences was similar to their organization in other eukaryotes. The 28S-18S IGS rDNA sequences of both O. dentatum and O. quadrispinulatum were found to have variable lengths, that is, 759-762 bp and 937-1128 bp, respectively. All of the sequences contained direct repeats and inverted repeats. The length polymorphisms were related to the different numbers and organization of repetitive elements. Different types and numbers of repeats were found between the two pig nodule species, and two IGS structures were found within O. quadrispinulatum. Phylogenetic analysis showed that all O. dentatum isolates were clustered into one clade, but O. quadrispinulatum isolates from different origins were grouped into two distinct clusters. These results suggested independent species and the existence of genotypes or subspecies within pig nodule worms. Different types and numbers of repeats and IGS rDNA structures could serve as potential markers for differentiating these two species of pig nodule worms.


Subject(s)
DNA, Ribosomal Spacer/genetics , Oesophagostomum/genetics , Phylogeny , Swine/parasitology , Animals , Base Sequence , China , Cluster Analysis , DNA Primers/genetics , Gene Order , Geography , Models, Genetic , Molecular Sequence Data , Sequence Analysis, DNA , Species Specificity
19.
ScientificWorldJournal ; 2014: 718590, 2014.
Article in English | MEDLINE | ID: mdl-24741355

ABSTRACT

Little is known about the prevalence of Sarcoptes scabiei infection in pet dogs in China. In the present study, the prevalence of S. scabiei infection in pet dogs in Guangzhou, southern China, was investigated between January and December, 2009. A total of 3,977 pet dogs admitted to animal hospitals were examined for the presence of S. scabiei using a parasitological approach. The average prevalence of S. scabiei infection in pet dogs is 1.18% (95% confidence interval (CI): 0.85-1.52%). The prevalence of S. scabiei was higher in winter (1.42%; 95% CI: 0.29-2.55%), summer (1.39%; 95% CI: 0.83-1.96%), and autumn (1.1%; 95% CI: 0.53-1.68%) than in spring (0.63%; 95% CI: 0.02-1.25%). Furthermore, the prevalence of S. scabiei was the highest in Pekingese (21.88%; 95% CI: 7.55-36.2%), followed by Papillon (5.26%; 95% CI: 0-11.06%) and Bichon Frise (3.19%; 95% CI: 0-6.75%). The results of the present investigation indicate that S. scabiei infection is prevalent in pet dogs in Guangzhou, China, which provides relevant "baseline" data for conducting control strategies and measures against scabies in this region and elsewhere in China. To our knowledge, this is the first comprehensive report of S. scabiei prevalence in pet dogs in China.


Subject(s)
Dog Diseases/epidemiology , Sarcoptes scabiei/pathogenicity , Scabies/epidemiology , Animals , China/epidemiology , Dog Diseases/parasitology , Dogs , Female , Male , Prevalence , Scabies/parasitology
20.
Electrophoresis ; 35(4): 533-45, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24166805

ABSTRACT

Toxoplasma gondii is a protozoan parasite infecting almost all warm-blooded animals and humans. There are three infective stages of T. gondii: the tachyzoites, the bradyzoites, and the oocysts. The tachyzoite is a rapidly multiplying stage and the main pathogenic factor. In North America and Europe, T. gondii is consisted of four major clonal lineages (namely Types I, II, III, and Type 12). In this study, we explored the proteomic profiles of different genotypes (Type I-RH strain, Type II-PRU strain, Type II-TgQHO strain, and ToxoDB 9-TgC7 strain) of T. gondii tachyzoites by using 2D DIGE combined with MALDI-TOF MS. Totally, 110 differentially abundant protein spots were selected. Of these, 98 spots corresponding to 56 proteins from T. gondii were successfully identified. These included surface antigen (SAG1), heat shock protein 70 (Hsp 70), disulfide isomerase, coronin, heat shock protein 60 (Hsp 60), pyruvate kinase, receptor for activated C kinase 1, and peroxiredoxin. Gene ontology enrichment analysis revealed that most of the differentially abundant proteins were involved in biological regulation, metabolic process, response to stress, binding, antioxidant activity, and transporter activity. According to the KEGG metabolic pathway maps of T. gondii, some identified proteins were involved in the glycolytic/gluconeogenesis pathway. The present study identified differentially abundant proteins among different genotypes of T. gondii and these findings have implications for the better understanding of the phenotypic differences among the examined T. gondii genotypes, which in turn may contribute to the better control of toxoplasmosis.


Subject(s)
Proteome/analysis , Proteomics/methods , Protozoan Proteins/analysis , Toxoplasma/chemistry , Toxoplasma/genetics , Genotype , Life Cycle Stages , Mass Spectrometry , Metabolic Networks and Pathways , Proteome/genetics , Protozoan Proteins/genetics , Spectrometry, Fluorescence , Two-Dimensional Difference Gel Electrophoresis
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