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1.
Plant Cell ; 35(1): 298-317, 2023 01 02.
Article in English | MEDLINE | ID: mdl-36135824

ABSTRACT

The precise timing of flowering in adverse environments is critical for plants to secure reproductive success. We report a mechanism in Arabidopsis (Arabidopsis thaliana) controlling the time of flowering by which the S-acylation-dependent nuclear import of the protein SALT OVERLY SENSITIVE3/CALCINEURIN B-LIKE4 (SOS3/CBL4), a Ca2+-signaling intermediary in the plant response to salinity, results in the selective stabilization of the flowering time regulator GIGANTEA inside the nucleus under salt stress, while degradation of GIGANTEA in the cytosol releases the protein kinase SOS2 to achieve salt tolerance. S-acylation of SOS3 was critical for its nuclear localization and the promotion of flowering, but partly dispensable for salt tolerance. SOS3 interacted with the photoperiodic flowering components GIGANTEA and FLAVIN-BINDING, KELCH REPEAT, F-BOX1 and participated in the transcriptional complex that regulates CONSTANS to sustain the transcription of CO and FLOWERING LOCUS T under salinity. Thus, the SOS3 protein acts as a Ca2+- and S-acylation-dependent versatile regulator that fine-tunes flowering time in a saline environment through the shared spatial separation and selective stabilization of GIGANTEA, thereby connecting two signaling networks to co-regulate the stress response and the time of flowering.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Calcineurin/metabolism , Calcium/metabolism , Salt Stress , Gene Expression Regulation, Plant , Flowers/metabolism
2.
Plant Physiol Biochem ; 168: 239-251, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34656860

ABSTRACT

Nitrate and potassium nutrition is tightly coordinated in vascular plants. Physiological and molecular genetics studies have demonstrated that several NPF/NRT1 nitrate transporters have a significant impact on both uptake and the root-shoot partition of these nutrients. However, how these traits are biochemically connected remain controversial since some NPF proteins, e.g. NPF7.3/NRT1.5, have been suggested to mediate K+/H+ exchange instead of nitrate fluxes. Here we show that NPF6.2/NRT1.4, a protein that gates nitrate accumulation at the leaf petiole of Arabidopsis thaliana, also affects the root/shoot distribution of potassium. We demonstrate that NPF6.2/NRT1.4 is a plasma membrane nitrate transporter phosphorylated at threonine-98 by the CIPK23 protein kinase that is a regulatory hub for nitrogen and potassium nutrition. Heterologous expression of NPF6.2/NRT1.4 and NPF7.3/NRT1.5 in yeast mutants with altered potassium uptake and efflux systems showed no evidence of nitrate-dependent potassium transport by these proteins.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Anion Transport Proteins/genetics , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cell Membrane/metabolism , Mutation , Nitrate Transporters , Nitrates/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Roots/metabolism , Plant Shoots/metabolism , Protein Kinases
3.
Front Plant Sci ; 11: 247, 2020.
Article in English | MEDLINE | ID: mdl-32211003

ABSTRACT

Potassium (K+) and nitrogen (N) are essential nutrients, and their absorption and distribution within the plant must be coordinated for optimal growth and development. Potassium is involved in charge balance of inorganic and organic anions and macromolecules, control of membrane electrical potential, pH homeostasis and the regulation of cell osmotic pressure, whereas nitrogen is an essential component of amino acids, proteins, and nucleic acids. Nitrate (NO3 -) is often the primary nitrogen source, but it also serves as a signaling molecule to the plant. Nitrate regulates root architecture, stimulates shoot growth, delays flowering, regulates abscisic acid-independent stomata opening, and relieves seed dormancy. Plants can sense K+/NO3 - levels in soils and adjust accordingly the uptake and root-to-shoot transport to balance the distribution of these ions between organs. On the other hand, in small amounts sodium (Na+) is categorized as a "beneficial element" for plants, mainly as a "cheap" osmolyte. However, at high concentrations in the soil, Na+ can inhibit various physiological processes impairing plant growth. Hence, plants have developed specific mechanisms to transport, sense, and respond to a variety of Na+ conditions. Sodium is taken up by many K+ transporters, and a large proportion of Na+ ions accumulated in shoots appear to be loaded into the xylem by systems that show nitrate dependence. Thus, an adequate supply of mineral nutrients is paramount to reduce the noxious effects of salts and to sustain crop productivity under salt stress. In this review, we will focus on recent research unraveling the mechanisms that coordinate the K+-NO3 -; Na+-NO3 -, and K+-Na+ transports, and the regulators controlling their uptake and allocation.

4.
J Exp Bot ; 67(6): 1951-64, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26842981

ABSTRACT

Redox regulation plays a central role in the adaptation of chloroplast metabolism to light. Extensive biochemical analyses in vitro have identified f-type thioredoxins (Trxs) as the most important catalysts for light-dependent reduction and activation of the enzymes of the Calvin-Benson cycle. However, the precise function of type f Trxs in vivo and their impact on plant growth are still poorly known. To address this issue we have generated an Arabidopsis thaliana double knock-out mutant, termed trxf1f2, devoid of both f1 and f2 Trxs. Despite the essential function previously proposed for f-type Trxs, the visible phenotype of the trxf1f2 double mutant was virtually indistinguishable from the wild type when grown under a long-day photoperiod. However, the Trx f-deficient plants showed growth inhibition under a short-day photoperiod which was not rescued at high light intensity. The absence of f-type Trxs led to significantly lower photosynthetic electron transport rates and higher levels of non-photochemical energy quenching. Notably, the Trx f null mutant suffered from a shortage of photosystem I electron acceptors and delayed activation of carbon dioxide fixation following a dark-light transition. Two redox-regulated Calvin-Benson cycle enzymes, fructose 1,6-bisphosphatase (FBPase) and Rubisco activase, showed retarded and incomplete reduction in the double mutant upon illumination, compared with wild-type plants. These results show that the function of f-type Trxs in the rapid activation of carbon metabolism in response to light is not entirely compensated for by additional plastid redox systems, and suggest that these Trxs have an important role in the light adjustment of photosynthetic metabolism.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/growth & development , Arabidopsis/metabolism , Carbon/metabolism , Chloroplast Thioredoxins/metabolism , Photoperiod , Arabidopsis/enzymology , Arabidopsis/genetics , Carbon Dioxide/metabolism , Electron Transport/radiation effects , Gene Expression Regulation, Plant/radiation effects , Kinetics , Light , Mutation/genetics , Oxidation-Reduction/radiation effects , Photosynthesis/radiation effects , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Plant Development/radiation effects , Plants, Genetically Modified , RNA, Messenger/genetics , RNA, Messenger/metabolism
5.
Plant Cell Environ ; 39(4): 804-22, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26476233

ABSTRACT

High irradiances may lead to photooxidative stress in plants, and non-photochemical quenching (NPQ) contributes to protection against excess excitation. One of the NPQ mechanisms, qE, involves thermal dissipation of the light energy captured. Importantly, plants need to tune down qE under light-limiting conditions for efficient utilization of the available quanta. Considering the possible redox control of responses to excess light implying enzymes, such as thioredoxins, we have studied the role of the NADPH thioredoxin reductase C (NTRC). Whereas Arabidopsis thaliana plants lacking NTRC tolerate high light intensities, these plants display drastically elevated qE, have larger trans-thylakoid ΔpH and have 10-fold higher zeaxanthin levels under low and medium light intensities, leading to extremely low linear electron transport rates. To test the impact of the high qE on plant growth, we generated an ntrc-psbs double-knockout mutant, which is devoid of qE. This double mutant grows faster than the ntrc mutant and has a higher chlorophyll content. The photosystem II activity is partially restored in the ntrc-psbs mutant, and linear electron transport rates under low and medium light intensities are twice as high as compared with plants lacking ntrc alone. These data uncover a new role for NTRC in the control of photosynthetic yield.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Arabidopsis/radiation effects , Chloroplasts/enzymology , Light , Photosynthesis/radiation effects , Thioredoxin-Disulfide Reductase/metabolism , Arabidopsis/drug effects , Arabidopsis/physiology , Arabidopsis Proteins/genetics , Chlorophyll/metabolism , Chloroplasts/drug effects , Chloroplasts/radiation effects , Dithiothreitol/pharmacology , Electron Transport/drug effects , Electron Transport/radiation effects , Fluorescence , Gene Knockout Techniques , Mutation/genetics , Nigericin/pharmacology , Peroxiredoxins/metabolism , Photosynthesis/drug effects , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Thioredoxin-Disulfide Reductase/genetics , Xanthophylls/metabolism
6.
Methods Enzymol ; 527: 257-73, 2013.
Article in English | MEDLINE | ID: mdl-23830636

ABSTRACT

Peroxiredoxins (Prxs) are peroxidases that use thiol-based catalytic mechanisms implying redox-active cysteines. The different Prx families have homologs in all photosynthetic organisms, including plants, algae, and cyanobacteria. However, recent studies show that the physiological reduction systems that provide Prxs with reducing equivalents to sustain their activities differ considerably between cyanobacterial strains. Thus, for example, the filamentous cyanobacterium Anabaena sp. PCC 7120 is similar to the chloroplast in that it possesses an abundant 2-Cys Prx, which receives electrons from the NADPH-dependent thioredoxin reductase C (NTRC). In contrast, the unicellular cyanobacterium Synechocystis sp. PCC 6803, which lacks NTRC, has little 2-Cys Prx but high amounts of PrxII and 1-Cys Prx. The characterization of cyanobacterial Prxs and their electron donors relies on straightforward enzymatic assays and tools to study the physiological relevance of these systems. Here, we present methods to measure peroxidase activities in vitro and peroxide decomposition in vivo. Several approaches to detect overoxidation of the active site cysteine in cyanobacterial 2-Cys Prxs are also described.


Subject(s)
Bacterial Proteins/chemistry , Cyanobacteria/enzymology , Peroxiredoxins/chemistry , Plant Proteins/chemistry , Bacterial Proteins/isolation & purification , Catalytic Domain , Cloning, Molecular , Electrons , Enzyme Assays , Escherichia coli , Hydrogen Peroxide/chemistry , Isoelectric Focusing , Kinetics , Models, Chemical , Native Polyacrylamide Gel Electrophoresis , Oxidation-Reduction , Peroxiredoxins/isolation & purification , Plant Proteins/isolation & purification , Thioredoxins/chemistry , Thioredoxins/isolation & purification
7.
PLoS One ; 7(12): e51443, 2012.
Article in English | MEDLINE | ID: mdl-23227265

ABSTRACT

A genetic program that in sunflower seeds is activated by Heat Shock transcription Factor A9 (HaHSFA9) has been analyzed in transgenic tobacco seedlings. The ectopic overexpression of the HSFA9 program protected photosynthetic membranes, which resisted extreme dehydration and oxidative stress conditions. In contrast, heat acclimation of seedlings induced thermotolerance but not resistance to the harsh stress conditions employed. The HSFA9 program was found to include the expression of plastidial small Heat Shock Proteins that accumulate only at lower abundance in heat-stressed vegetative organs. Photosystem II (PSII) maximum quantum yield was higher for transgenic seedlings than for non-transgenic seedlings, after either stress treatment. Furthermore, protection of both PSII and Photosystem I (PSI) membrane protein complexes was observed in the transgenic seedlings, leading to their survival after the stress treatments. It was also shown that the plastidial D1 protein, a labile component of the PSII reaction center, and the PSI core protein PsaB were shielded from oxidative damage and degradation. We infer that natural expression of the HSFA9 program during embryogenesis may protect seed pro-plastids from developmental desiccation.


Subject(s)
Nicotiana/genetics , Nicotiana/physiology , Oxidative Stress , Photosynthesis , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Seedlings/metabolism , Acclimatization , Dehydration , Membrane Proteins/metabolism , Plant Proteins/metabolism , Plants, Genetically Modified , Plastids/metabolism , Proteolysis
8.
Antioxid Redox Signal ; 17(4): 521-33, 2012 Aug 15.
Article in English | MEDLINE | ID: mdl-22530622

ABSTRACT

AIMS: Protein phosphorylation is a principal signaling mechanism that mediates regulation of enzymatic activities, modulation of gene expression, and adaptation to environmental changes. Recent studies have shown a ubiquitous distribution of eukaryotic-type Serine/Threonine protein kinases in prokaryotic genomes, though the functions, substrates, and possible regulation of these enzymes remain largely unknown. In this study, we investigated whether cyanobacterial protein phosphorylation may be subject to redox regulation through modulation of the cysteine redox state, as has previously been reported for animals and plants. We also explored the role of a cyanobacterial Serine/Threonine kinase in oxidative stress tolerance. RESULTS: The Synechocystis sp. PCC 6803 Serine/Threonine kinase SpkB was found to be inhibited by oxidation and reactivated by thioredoxin-catalyzed reduction. A Synechocystis mutant devoid of the SpkB kinase was unable to phosphorylate the glycyl-tRNA synthetase ß-subunit (GlyS), one of the most prominent phosphoproteins in the wild type, and recombinant purified SpkB could phosphorylate purified GlyS. In vivo characterization of the SpkB mutant showed a pronounced hypersensitivity to oxidative stress and displayed severe growth retardation or death in response to menadione, methyl viologen, and elevated light intensities. INNOVATION: This study points out a previously unrecognised complexity of prokaryotic regulatory pathways in adaptation to the environment and extends the roles of bacterial eukaryotic-like Serine/Threonine kinases to oxidative stress response. CONCLUSION: The SpkB kinase is required for survival of the cyanobacterium Synechocystis sp. PCC 6803 under conditions implying increased concentrations of reactive oxygen species, and the activity of SpkB depends on the redox state of its cysteines.


Subject(s)
Adaptation, Physiological , Oxidative Stress , Protein Serine-Threonine Kinases/metabolism , Sulfhydryl Compounds/metabolism , Synechocystis/enzymology , Base Sequence , Biocatalysis , Cysteine/metabolism , DNA Primers , Glycine-tRNA Ligase/metabolism , Mutation , Oxidation-Reduction , Phosphorylation , Polymerase Chain Reaction , Protein Serine-Threonine Kinases/genetics , Substrate Specificity , Thioredoxins/metabolism
9.
Antioxid Redox Signal ; 14(12): 2581-642, 2011 Jun 15.
Article in English | MEDLINE | ID: mdl-21275844

ABSTRACT

Ten years ago, proteomics techniques designed for large-scale investigations of redox-sensitive proteins started to emerge. The proteomes, defined as sets of proteins containing reactive cysteines that undergo oxidative post-translational modifications, have had a particular impact on research concerning the redox regulation of cellular processes. These proteomes, which are hereafter termed "disulfide proteomes," have been studied in nearly all kingdoms of life, including animals, plants, fungi, and bacteria. Disulfide proteomics has been applied to the identification of proteins modified by reactive oxygen and nitrogen species under stress conditions. Other studies involving disulfide proteomics have addressed the functions of thioredoxins and glutaredoxins. Hence, there is a steadily growing number of proteins containing reactive cysteines, which are probable targets for redox regulation. The disulfide proteomes have provided evidence that entire pathways, such as glycolysis, the tricarboxylic acid cycle, and the Calvin-Benson cycle, are controlled by mechanisms involving changes in the cysteine redox state of each enzyme implicated. Synthesis and degradation of proteins are processes highly represented in disulfide proteomes and additional biochemical data have established some mechanisms for their redox regulation. Thus, combined with biochemistry and genetics, disulfide proteomics has a significant potential to contribute to new discoveries on redox regulation and signaling.


Subject(s)
Cysteine/chemistry , Disulfides/chemistry , Proteome/analysis , Amino Acid Sequence , Animals , Citric Acid Cycle , Cysteine/metabolism , Glycolysis , Humans , Mass Spectrometry/methods , Models, Molecular , Molecular Sequence Data , Molecular Structure , Oxidation-Reduction , Photosynthesis , Protein Conformation , Sequence Alignment , Signal Transduction/physiology , Sulfhydryl Compounds/chemistry , Sulfhydryl Compounds/metabolism , Thioredoxins/metabolism
10.
Plant Physiol ; 155(4): 1806-16, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21335525

ABSTRACT

Redox regulation based on disulfide-dithiol conversion catalyzed by thioredoxins is an important component of chloroplast function. The reducing power is provided by ferredoxin reduced by the photosynthetic electron transport chain. In addition, chloroplasts are equipped with a peculiar NADPH-dependent thioredoxin reductase, termed NTRC, with a joint thioredoxin domain at the carboxyl terminus. Because NADPH can be produced by the oxidative pentose phosphate pathway during the night, NTRC is important to maintain the chloroplast redox homeostasis under light limitation. NTRC is exclusive for photosynthetic organisms such as plants, algae, and some, but not all, cyanobacteria. Phylogenetic analysis suggests that chloroplast NTRC originated from an ancestral cyanobacterial enzyme. While the biochemical properties of plant NTRC are well documented, little is known about the cyanobacterial enzyme. With the aim of comparing cyanobacterial and plant NTRCs, we have expressed the full-length enzyme from the cyanobacterium Anabaena species PCC 7120 as well as site-directed mutant variants and truncated polypeptides containing the NTR or the thioredoxin domains of the protein. Immunological and kinetic analysis showed a high similarity between NTRCs from plants and cyanobacteria. Both enzymes efficiently reduced 2-Cys peroxiredoxins from plants and from Anabaena but not from the cyanobacterium Synechocystis. Arabidopsis (Arabidopsis thaliana) NTRC knockout plants were transformed with the Anabaena NTRC gene. Despite a lower content of NTRC than in wild-type plants, the transgenic plants showed significant recovery of growth and pigmentation. Therefore, the Anabaena enzyme fulfills functions of the plant enzyme in vivo, further emphasizing the similarity between cyanobacterial and plant NTRCs.


Subject(s)
Anabaena/enzymology , Arabidopsis/enzymology , Peroxiredoxins/biosynthesis , Thioredoxin-Disulfide Reductase/metabolism , Anabaena/genetics , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Chloroplasts/enzymology , Genetic Complementation Test , Mutation , NADP/metabolism , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , Protein Structure, Quaternary , Synechocystis/enzymology , Synechocystis/genetics , Thioredoxin-Disulfide Reductase/genetics , Thioredoxins/metabolism
11.
J Biol Chem ; 285(45): 34485-92, 2010 Nov 05.
Article in English | MEDLINE | ID: mdl-20736168

ABSTRACT

In eukaryotic organisms, hydrogen peroxide has a dual effect; it is potentially toxic for the cell but also has an important signaling activity. According to the previously proposed floodgate hypothesis, the signaling activity of hydrogen peroxide in eukaryotes requires a transient increase in its concentration, which is due to the inactivation by overoxidation of 2-Cys peroxiredoxin (2-Cys Prx). Sensitivity to overoxidation depends on the structural GGLG and YF motifs present in eukaryotic 2-Cys Prxs and is believed to be absent from prokaryotic enzymes, thus representing a paradoxical gain of function exclusive to eukaryotic organisms. Here we show that 2-Cys Prxs from several prokaryotic organisms, including cyanobacteria, contain the GG(L/V/I)G and YF motifs characteristic of sensitive enzymes. In search of the existence of overoxidation-sensitive 2-Cys Prxs in prokaryotes, we have analyzed the sensitivity to overoxidation of 2-Cys Prxs from two cyanobacterial strains, Anabaena sp. PCC7120 and Synechocystis sp. PCC6803. In vitro analysis of wild type and mutant variants of the Anabaena 2-Cys Prx showed that this enzyme is overoxidized at the peroxidatic cysteine residue, thus constituting an exception among prokaryotes. Moreover, the 2-Cys Prx from Anabaena is readily and reversibly overoxidized in vivo in response to high light and hydrogen peroxide, showing higher sensitivity to overoxidation than the Synechocystis enzyme. These cyanobacterial strains have different strategies to cope with hydrogen peroxide. While Synechocystis has low content of less sensitive 2-Cys Prx and high catalase activity, Anabaena contains abundant and sensitive 2-Cys Prx, but low catalase activity, which is remarkably similar to the chloroplast system.


Subject(s)
Anabaena/enzymology , Bacterial Proteins/metabolism , Cysteine/metabolism , Hydrogen Peroxide/metabolism , Peroxiredoxins/metabolism , Synechocystis/enzymology , Amino Acid Motifs , Anabaena/genetics , Bacterial Proteins/genetics , Catalase/genetics , Catalase/metabolism , Cysteine/genetics , Oxidation-Reduction , Oxidative Stress/physiology , Peroxiredoxins/genetics , Synechocystis/genetics
12.
Proteomics ; 10(5): 987-1001, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20049866

ABSTRACT

The light-dependent regulation of stromal enzymes by thioredoxin (Trx)-catalysed disulphide/dithiol exchange is known as a classical mechanism for control of chloroplast metabolism. Recent proteome studies show that Trx targets are present not only in the stroma but in all chloroplast compartments, from the envelope to the thylakoid lumen. Trx-mediated redox control appears to be a common feature of important pathways, such as the Calvin cycle, starch synthesis and tetrapyrrole biosynthesis. However, the extent of thiol-dependent redox regulation in the thylakoid lumen has not been previously systematically explored. In this study, we addressed Trx-linked redox control in the chloroplast lumen of Arabidopsis thaliana. Using complementary proteomics approaches, we identified 19 Trx target proteins, thus covering more than 40% of the currently known lumenal chloroplast proteome. We show that the redox state of thiols is decisive for degradation of the extrinsic PsbO1 and PsbO2 subunits of photosystem II. Moreover, disulphide reduction inhibits activity of the xanthophyll cycle enzyme violaxanthin de-epoxidase, which participates in thermal dissipation of excess absorbed light. Our results indicate that redox-controlled reactions in the chloroplast lumen play essential roles in the function of photosystem II and the regulation of adaptation to light intensity.


Subject(s)
Arabidopsis/metabolism , Chloroplasts/metabolism , Thioredoxins/metabolism , Alkylation/drug effects , Arabidopsis/drug effects , Arabidopsis/enzymology , Arabidopsis Proteins/isolation & purification , Arabidopsis Proteins/metabolism , Biocatalysis/drug effects , Bridged Bicyclo Compounds/metabolism , Chloroplasts/drug effects , Chromatography, Affinity , Electrophoresis, Polyacrylamide Gel , Enzyme Activation/drug effects , Oxidation-Reduction/drug effects , Oxidoreductases/antagonists & inhibitors , Oxidoreductases/metabolism , Protein Binding/drug effects , Protein Processing, Post-Translational/drug effects , Proteome/metabolism , Staining and Labeling , Sulfhydryl Compounds/metabolism , Synechocystis/metabolism , Thioredoxins/pharmacology
13.
J Bacteriol ; 191(24): 7477-89, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19820102

ABSTRACT

Cyanobacteria perform oxygenic photosynthesis, which gives rise to the continuous production of reactive oxygen species, such as superoxide anion radicals and hydrogen peroxide, particularly under unfavorable growth conditions. Peroxiredoxins, which are present in both chloroplasts and cyanobacteria, constitute a class of thiol-dependent peroxidases capable of reducing hydrogen peroxide as well as alkyl hydroperoxides. Chloroplast peroxiredoxins have been studied extensively and have been found to use a variety of endogenous electron donors, such as thioredoxins, glutaredoxins, or cyclophilin, to sustain their activities. To date, however, the endogenous reduction systems for cyanobacterial peroxiredoxins have not been systematically studied. We have expressed and purified all five Synechocystis sp. strain PCC 6803 peroxiredoxins, which belong to the classes 1-Cys Prx, 2-Cys Prx, type II Prx (PrxII), and Prx Q, and we have examined their capacities to interact with and receive electrons from the m-, x-, and y-type thioredoxins from the same organism, which are called TrxA, TrxB, and TrxQ, respectively. Assays for peroxidase activity demonstrated that all five enzymes could use thioredoxins as electron donors, whereas glutathione and Synechocystis sp. strain PCC 6803 glutaredoxins were inefficient. The highest catalytic efficiency was obtained for the couple consisting of PrxII and TrxQ thioredoxin. Studies of transcript levels for the peroxiredoxins and thioredoxins under different stress conditions highlighted the similarity between the PrxII and TrxQ thioredoxin expression patterns.


Subject(s)
Bacterial Proteins/metabolism , Peroxiredoxins/metabolism , Synechocystis/enzymology , Thioredoxins/metabolism , Bacterial Proteins/genetics , Cloning, Molecular , Gene Expression , Gene Expression Profiling , Glutaredoxins/metabolism , Glutathione/metabolism , Oxidation-Reduction , Peroxiredoxins/genetics , Peroxiredoxins/isolation & purification , Stress, Physiological , Substrate Specificity , Synechocystis/genetics , Thioredoxins/genetics
14.
J Proteomics ; 72(3): 416-38, 2009 Apr 13.
Article in English | MEDLINE | ID: mdl-19185068

ABSTRACT

Light-dependent disulphide/dithiol exchange catalysed by thioredoxin is a classical example of redox regulation of chloroplast enzymes. Recent proteome studies have mapped thioredoxin target proteins in all chloroplast compartments ranging from the envelope to the thylakoid lumen. Progress in the methodologies has made it possible to identify which cysteine residues interact with thioredoxin and to tackle membrane-bound thioredoxin targets. To date, more than hundred targets of thioredoxin and glutaredoxin have been found in plastids from Arabidopsis, spinach, poplar and Chlamydomonas reinhardtii. Thioredoxin-mediated redox control appears to be a feature of the central pathways for assimilation and storage of carbon, sulphur and nitrogen, as well as for translation and protein folding. Cyanobacteria are oxygenic photosynthetic prokaryotes, which presumably share a common ancestor with higher plant plastids. As in chloroplasts, cyanobacterial thioredoxins receive electrons from the photosynthetic electron transport, and thioredoxin-targeted proteins are therefore highly interesting in the context of acclimation of these organisms to their environment. Studies of the unicellular model cyanobacterium Synechocystis sp. PCC 6803 revealed 77 thioredoxin target proteins. Notably, the functions of all these thioredoxin targets highlight essentially the same processes as those described in chloroplasts suggesting that thioredoxin-mediated redox signalling is equally significant in oxygenic photosynthetic prokaryotes and eukaryotes.


Subject(s)
Chloroplasts/metabolism , Cyanobacteria/metabolism , Disulfides/metabolism , Proteome/metabolism , Thioredoxins/metabolism , Animals , Humans , Oxidation-Reduction
15.
Proteomics ; 7(21): 3953-63, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17922517

ABSTRACT

Cysteine dithiol/disulphide exchange forms the molecular basis for regulation of a wide variety of enzymatic activities and for transduction of cellular signals. Thus, the search for proteins with reactive, accessible cysteines is expected to contribute to the unravelling of new molecular mechanisms for enzyme regulation and signal transduction. Several methods have been designed for this purpose taking advantage of the interactions between thioredoxins and their protein substrates. Thioredoxins comprise a family of redox-active enzymes, which catalyse reduction of protein disulphides and sulphenic acids. Due to the inherent practical difficulties associated with studies of membrane proteins these have been largely overlooked in the many proteomic studies of thioredoxin-interacting proteins. In the present work, we have developed a procedure to isolate membrane proteins interacting with thioredoxin by binding in situ to a monocysteinic His-tagged thioredoxin added directly to the intact membranes. Following fractionation and solubilisation of the membranes, thioredoxin target proteins were isolated by Ni-affinity chromatography and 2-DE SDS-PAGE under nonreducing/reducing conditions. Applying this method to total membranes, including thylakoid and plasma membranes, from the cyanobacterium Synechocystis sp. PCC 6803 we have identified 50 thioredoxin-interacting proteins. Among the 38 newly identified thioredoxin targets are the ATP-binding subunits of several transporters and members of the AAA-family of ATPases.


Subject(s)
Bacterial Proteins/metabolism , Membrane Proteins/metabolism , Synechocystis/metabolism , Thioredoxins/metabolism , Bacterial Proteins/isolation & purification , Electrophoresis, Gel, Two-Dimensional , Membrane Proteins/isolation & purification , Protein Interaction Mapping , Proteomics
16.
Photosynth Res ; 89(2-3): 157-71, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16969714

ABSTRACT

Cyanobacteria perform oxygenic photosynthesis, which makes them unique among the prokaryotes, and this feature together with their abundance and worldwide distribution renders them a central ecological role. Cyanobacteria and chloroplasts of plants and algae are believed to share a common ancestor and the modern chloroplast would thus be the remnant of an endosymbiosis between a eukaryotic cell and an ancestral oxygenic photosynthetic prokaryote. Chloroplast metabolic processes are coordinated with those of the other cellular compartments and are strictly controlled by means of regulatory systems that commonly involve redox reactions. Disulphide/dithiol exchange catalysed by thioredoxin is a fundamental example of such regulation and represents the molecular mechanism for light-dependent redox control of an ever-increasing number of chloroplast enzymatic activities. In contrast to chloroplast thioredoxins, the functions of the cyanobacterial thioredoxins have long remained elusive, despite their common origin. The sequenced genomes of several cyanobacterial species together with novel experimental approaches involving proteomics have provided new tools for re-examining the roles of the thioredoxin systems in these organisms. Thus, each cyanobacterial genome encodes between one and eight thioredoxins and all components necessary for the reduction of thioredoxins. Screening for thioredoxin target proteins in cyanobacteria indicates that assimilation and storage of nutrients, as well as some central metabolic pathways, are regulated by mechanisms involving disulphide/dithiol exchange, which could be catalysed by thioredoxins or related thiol-containing proteins.


Subject(s)
Cyanobacteria/metabolism , Fungal Proteins/metabolism , Genetic Variation , Thioredoxins/genetics , Thioredoxins/metabolism , Phylogeny , Thioredoxins/chemistry
17.
Proteomics ; 6 Suppl 1: S186-95, 2006 Apr.
Article in English | MEDLINE | ID: mdl-16526092

ABSTRACT

Searching for enzymes and other proteins which can be redox-regulated by dithiol/disulphide exchange is a rapidly expanding area of functional proteomics. Recently, several experimental approaches using thioredoxins have been developed for this purpose. Thioredoxins comprise a large family of redox-active enzymes capable of reducing protein disulphides to cysteines and of participating in a variety of processes, such as enzyme modulation, donation of reducing equivalents and signal transduction. In this study we screened the target proteomes of three different thioredoxins from the unicellular cyanobacterium Synechocystis sp. PCC 6803, using site-directed active-site cysteine-to-serine mutants of its m-, x- and y-type thioredoxins. The properties of a thioredoxin that determine the outcome of such analyses were found to be target-binding capacity, solubility and the presence of non-active-site cysteines. Thus, we explored how the choice of thioredoxin affects the target proteomes and we conclude that the m-type thioredoxin, TrxA, is by far the most useful for screening of disulphide proteomes. Furthermore, we improved the resolution of target proteins on non-reducing/reducing 2-DE, leading to the identification of 14 new potentially redox-regulated proteins in this organism. The presence of glycogen phosphorylase among the newly identified targets suggests that glycogen breakdown is redox-regulated in addition to glycogen synthesis.


Subject(s)
Disulfides/metabolism , Proteome/metabolism , Proteomics , Synechocystis/physiology , Thioredoxins/physiology , Amino Acid Sequence , Molecular Sequence Data , Oxidation-Reduction , Protein Binding , Signal Transduction/physiology , Synechocystis/genetics , Thioredoxins/genetics
18.
Proteomics ; 4(2): 448-50, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14760716

ABSTRACT

Redox signalling constitutes a topic within the field of cellular signal transduction which is attracting increasing interest. A major challenge is to identify the components of redox signalling pathways. Proteins containing cysteines that may reversibly form disulphides are principal candidates as transmitters of redox signals. Thioredoxins are small proteins containing a highly reactive dithiol. Here we present a simple procedure to isolate and separate proteins that contain redox active cysteines using a site-directed, histidine-tagged mutant of thioredoxin, which forms stable mixed disulphides with its targets.


Subject(s)
Cyanobacteria/metabolism , Cysteine/metabolism , Proteome/analysis , Signal Transduction/physiology , Thioredoxins/metabolism , Disulfides/chemistry , Oxidation-Reduction
19.
Proc Natl Acad Sci U S A ; 100(26): 16107-12, 2003 Dec 23.
Article in English | MEDLINE | ID: mdl-14673118

ABSTRACT

Light-dependent regulation of a growing number of chloroplast enzymatic activities has been found to occur through the reversible reduction of intra- or intermolecular disulphides by thioredoxins. In cyanobacteria, despite their similarity to chloroplasts, no proteins have hitherto been shown to interact with thioredoxins, and the role of the cyanobacterial ferredoxin/thioredoxin system has remained obscure. By using an immobilized cysteine 35-to-serine site-directed mutant of the Synechocystis sp. PCC 6803 thioredoxin TrxA as bait, we screened the Synechocystis cytosolic and peripheral membrane protein complements for proteins interacting with TrxA. The covalent bond between the isolated target proteins and mutated TrxA was confirmed by nonreducing/reducing two-dimensional SDS/PAGE. Thus, we have identified 18 cytosolic proteins and 8 membrane-associated proteins as candidate thioredoxin substrates. Twenty of these proteins have not previously been associated with thioredoxin-mediated regulation. Phosphoglucomutase, one of the previously uncharacterized thioredoxin-linked enzymes, has not earlier been considered a target for metabolic control through disulphide reduction. In this article, we show that phosphoglucomutase is inhibited under oxidizing conditions and activated by DTT and reduced wild-type TrxA in vitro. The results imply that thioredoxin-mediated redox regulation is as extensive in cyanobacteria as in chloroplasts but that the subjects of regulation are largely different.


Subject(s)
Chloroplasts/metabolism , Cyanobacteria/metabolism , Ferredoxins/metabolism , Thioredoxins/metabolism , Bacterial Proteins/metabolism , Chloroplasts/drug effects , Chloroplasts/enzymology , Cyanobacteria/drug effects , Cyanobacteria/enzymology , Cytosol/metabolism , Dithiothreitol/pharmacology , Oxidation-Reduction , Phosphoglucomutase/metabolism
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