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1.
Photochem Photobiol Sci ; 22(7): 1637-1654, 2023 Jul.
Article in English | MEDLINE | ID: mdl-36995651

ABSTRACT

Ground level UV-B (290-315 nm) and UV-A (315-400 nm) radiation regulates multiple aspects of plant growth and development. In a natural environment, UV radiation interacts in a complex manner with other environmental factors (e.g., drought) to regulate plants' morphology, physiology, and growth. To assess the interactive effects of UV radiation and soil drying on plants' secondary metabolites and transcript abundance, we performed a field experiment using two different accessions of Medicago truncatula (F83005-5 French origin and Jemalong A17 Australian origin). Plants were grown for 37 days under long-pass filters to assess the effects of UV short wavelength (290-350 nm, UVsw) and UV-A long wavelength (350-400 nm, UV-Alw). Soil-water deficit was induced by not watering half of the plants during the last seven days of the experiment. The two accessions differed in the concentration of flavonoids in the leaf epidermis and in the whole leaf: F83005-5 had higher concentration than Jemalong A17. They also differed in the composition of the flavonoids: a greater number of apigenin derivatives than tricin derivatives in Jemalong A17 and the opposite in F83005-5. Furthermore, UVsw and soil drying interacted positively to regulate the biosynthesis of flavonoids in Jemalong A17 through an increase in transcript abundance of CHALCONE SYNTHASE (CHS). However, in F83005-5, this enhanced CHS transcript abundance was not detected. Taken together the observed metabolite and gene transcript responses suggest differences in mechanisms for acclimation and stress tolerance between the accessions.


Subject(s)
Medicago truncatula , Ultraviolet Rays , Medicago truncatula/genetics , Soil , Australia , Flavonoids , Plants
2.
Glob Chall ; 7(1): 2200166, 2023 Jan.
Article in English | MEDLINE | ID: mdl-36618102

ABSTRACT

Machine learning is arising as a major solution for the photovoltaic (PV) power prediction. Despite the abundant literature, the effect of climate on yield predictions using machine learning is unknown. This work aims to find climatic trends by predicting the power of 48 PV systems around the world, equally divided into four climates. An extensive data gathering process is performed and open-data sources are prioritized. A website www.tudelft.nl/open-source-pv-power-databases has been created with all found open data sources for future research. Five machine learning algorithms and a baseline one have been trained for each PV system. Results show that the performance ranking of the algorithms is independent of climate. Systems in dry climates depict on average the lowest Normalized Root Mean Squared Error (NRMSE) of 47.6 %, while those in tropical present the highest of 60.2 %. In mild and continental climates the NRMSE is 51.6 % and 54.5 %, respectively. When using a model trained in one climate to predict the power of a system located in another climate, on average systems located in cold climates show a lower generalization error, with an additional NRMSE as low as 5.6 % depending on the climate of the test set. Robustness evaluations  were also conducted that increase the validity of the results.

3.
Plant Cell Environ ; 43(6): 1513-1527, 2020 06.
Article in English | MEDLINE | ID: mdl-32167576

ABSTRACT

The photoreceptors UV RESISTANCE LOCUS 8 (UVR8) and CRYPTOCHROMES 1 and 2 (CRYs) play major roles in the perception of UV-B (280-315 nm) and UV-A/blue radiation (315-500 nm), respectively. However, it is poorly understood how they function in sunlight. The roles of UVR8 and CRYs were assessed in a factorial experiment with Arabidopsis thaliana wild-type and photoreceptor mutants exposed to sunlight for 6 or 12 hr under five types of filters with cut-offs in UV and blue-light regions. Transcriptome-wide responses triggered by UV-B and UV-A wavelengths shorter than 350 nm (UV-Asw ) required UVR8 whereas those induced by blue and UV-A wavelengths longer than 350 nm (UV-Alw ) required CRYs. UVR8 modulated gene expression in response to blue light while lack of CRYs drastically enhanced gene expression in response to UV-B and UV-Asw . These results agree with our estimates of photons absorbed by these photoreceptors in sunlight and with in vitro monomerization of UVR8 by wavelengths up to 335 nm. Motif enrichment analysis predicted complex signaling downstream of UVR8 and CRYs. Our results highlight that it is important to use UV waveband definitions specific to plants' photomorphogenesis as is routinely done in the visible region.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Arabidopsis/radiation effects , Chromosomal Proteins, Non-Histone/metabolism , Cryptochromes/metabolism , Ultraviolet Rays , Arabidopsis/genetics , Gene Expression Regulation, Plant , Nucleotide Motifs/genetics , Photons , RNA, Messenger/genetics , RNA, Messenger/metabolism , Nicotiana/metabolism
4.
J Exp Bot ; 70(18): 4975-4990, 2019 09 24.
Article in English | MEDLINE | ID: mdl-31100755

ABSTRACT

Cryptochromes (CRYs) and UV RESISTANCE LOCUS 8 (UVR8) photoreceptors perceive UV-A/blue (315-500 nm) and UV-B (280-315 nm) radiation in plants, respectively. While the roles of CRYs and UVR8 have been studied in separate controlled-environment experiments, little is known about the interaction between these photoreceptors. Here, Arabidopsis wild-type Ler, CRYs and UVR8 photoreceptor mutants (uvr8-2, cry1cry2 and cry1cry2uvr8-2), and a flavonoid biosynthesis-defective mutant (tt4) were grown in a sun simulator. Plants were exposed to filtered radiation for 17 d or for 6 h, to study the effects of blue, UV-A, and UV-B radiation. Both CRYs and UVR8 independently enabled growth and survival of plants under solar levels of UV, while their joint absence was lethal under UV-B. CRYs mediated gene expression under blue light. UVR8 mediated gene expression under UV-B radiation, and in the absence of CRYs, also under UV-A. This negative regulation of UVR8-mediated gene expression by CRYs was also observed for UV-B. The accumulation of flavonoids was also consistent with this interaction between CRYs and UVR8. In conclusion, we provide evidence for an antagonistic interaction between CRYs and UVR8 and a role of UVR8 in UV-A perception.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Chromosomal Proteins, Non-Histone/metabolism , Cryptochromes/metabolism , Sunlight , Arabidopsis/radiation effects , Ultraviolet Rays
5.
Remote Sens Environ ; 199: 171-186, 2017 Sep 15.
Article in English | MEDLINE | ID: mdl-28989191

ABSTRACT

This work presents a validation of three satellite-based radiation products over an extensive network of 313 pyranometers across Europe, from 2005 to 2015. The products used have been developed by the Satellite Application Facility on Climate Monitoring (CM SAF) and are one geostationary climate dataset (SARAH-JRC), one polar-orbiting climate dataset (CLARA-A2) and one geostationary operational product. Further, the ERA-Interim reanalysis is also included in the comparison. The main objective is to determine the quality level of the daily means of CM SAF datasets, identifying their limitations, as well as analyzing the different factors that can interfere in the adequate validation of the products. The quality of the pyranometer was the most critical source of uncertainty identified. In this respect, the use of records from Second Class pyranometers and silicon-based photodiodes increased the absolute error and the bias, as well as the dispersion of both metrics, preventing an adequate validation of the daily means. The best spatial estimates for the three datasets were obtained in Central Europe with a Mean Absolute Deviation (MAD) within 8-13 W/m2, whereas the MAD always increased at high-latitudes, snow-covered surfaces, high mountain ranges and coastal areas. Overall, the SARAH-JRC's accuracy was demonstrated over a dense network of stations making it the most consistent dataset for climate monitoring applications. The operational dataset was comparable to SARAH-JRC in Central Europe, but lacked of the temporal stability of climate datasets, while CLARA-A2 did not achieve the same level of accuracy despite predictions obtained showed high uniformity with a small negative bias. The ERA-Interim reanalysis shows the by-far largest deviations from the surface reference measurements.

6.
Plant Cell Environ ; 38(5): 941-52, 2015 May.
Article in English | MEDLINE | ID: mdl-25040832

ABSTRACT

Plants synthesize phenolic compounds in response to certain environmental signals or stresses. One large group of phenolics, flavonoids, is considered particularly responsive to ultraviolet (UV) radiation. However, here we demonstrate that solar blue light stimulates flavonoid biosynthesis in the absence of UV-A and UV-B radiation. We grew pea plants (Pisum sativum cv. Meteor) outdoors, in Finland during the summer, under five types of filters differing in their spectral transmittance. These filters were used to (1) attenuate UV-B; (2) attenuate UV-B and UV-A < 370 nm; (3) attenuate UV-B and UV-A; (4) attenuate UV-B, UV-A and blue light; and (5) as a control not attenuating these wavebands. Attenuation of blue light significantly reduced the flavonoid content in leaf adaxial epidermis and reduced the whole-leaf concentrations of quercetin derivatives relative to kaempferol derivatives. In contrast, UV-B responses were not significant. These results show that pea plants regulate epidermal UV-A absorbance and accumulation of individual flavonoids by perceiving complex radiation signals that extend into the visible region of the solar spectrum. Furthermore, solar blue light instead of solar UV-B radiation can be the main regulator of phenolic compound accumulation in plants that germinate and develop outdoors.


Subject(s)
Flavonoids/metabolism , Pisum sativum/radiation effects , Plant Leaves/radiation effects , Color , Pisum sativum/growth & development , Pisum sativum/metabolism , Phenols/metabolism , Plant Epidermis/metabolism , Plant Epidermis/radiation effects , Plant Leaves/metabolism , Ultraviolet Rays
7.
Plant Cell Environ ; 38(5): 878-91, 2015 May.
Article in English | MEDLINE | ID: mdl-24689869

ABSTRACT

Wavelengths in the ultraviolet (UV) region of the solar spectrum, UV-B (280-315 nm) and UV-A (315-400 nm), are key environmental signals modifying several aspects of plant physiology. Despite significant advances in the understanding of plant responses to UV-B and the identification of signalling components involved, there is limited information on the molecular mechanisms that control UV-B signalling in plants under natural sunlight. Here, we aimed to corroborate the previous suggested role for RADICAL-INDUCED CELL DEATH1 (RCD1) in UV-B signalling under full spectrum sunlight. Wild-type Arabidopsis thaliana and the rcd1-1 mutant were used in an experimental design outdoors where UV-B and UV-A irradiances were manipulated using plastic films, and gene expression, PYRIDOXINE BIOSYNTHESIS1 (PDX1) accumulation and metabolite profiles were analysed in the leaves. At the level of transcription, RCD1 was not directly involved in the solar UV-B regulation of genes with functions in UV acclimation, hormone signalling and stress-related markers. Furthermore, RCD1 had no role on PDX1 accumulation but modulated the UV-B induction of flavonoid accumulation in leaves of Arabidopsis exposed to solar UV. We conclude that RCD1 does not play an active role in UV-B signalling but rather modulates UV-B responses under full spectrum sunlight.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Arabidopsis/radiation effects , Gene Expression Regulation, Plant/radiation effects , Nuclear Proteins/metabolism , Acclimatization , Carbon-Nitrogen Lyases , Nitrogenous Group Transferases/metabolism , Phenols/metabolism , Plant Leaves/metabolism , Ultraviolet Rays
8.
Plant Physiol ; 161(2): 744-59, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23250626

ABSTRACT

Photomorphogenic responses triggered by low fluence rates of ultraviolet B radiation (UV-B; 280-315 nm) are mediated by the UV-B photoreceptor UV RESISTANCE LOCUS8 (UVR8). Beyond our understanding of the molecular mechanisms of UV-B perception by UVR8, there is still limited information on how the UVR8 pathway functions under natural sunlight. Here, wild-type Arabidopsis (Arabidopsis thaliana) and the uvr8-2 mutant were used in an experiment outdoors where UV-A (315-400 nm) and UV-B irradiances were attenuated using plastic films. Gene expression, PYRIDOXINE BIOSYNTHESIS1 (PDX1) accumulation, and leaf metabolite signatures were analyzed. The results show that UVR8 is required for transcript accumulation of genes involved in UV protection, oxidative stress, hormone signal transduction, and defense against herbivores under solar UV. Under natural UV-A irradiance, UVR8 is likely to interact with UV-A/blue light signaling pathways to moderate UV-B-driven transcript and PDX1 accumulation. UVR8 both positively and negatively affects UV-A-regulated gene expression and metabolite accumulation but is required for the UV-B induction of phenolics. Moreover, UVR8-dependent UV-B acclimation during the early stages of plant development may enhance normal growth under long-term exposure to solar UV.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/genetics , Chromosomal Proteins, Non-Histone/genetics , Transcriptome/radiation effects , Ultraviolet Rays , Acclimatization/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Carbon-Nitrogen Lyases , Chlorophyll/metabolism , Chromatography, Liquid , Chromosomal Proteins, Non-Histone/metabolism , Gene Expression Regulation, Developmental/radiation effects , Gene Expression Regulation, Plant/radiation effects , Mass Spectrometry , Mutation , Nitrogenous Group Transferases/genetics , Nitrogenous Group Transferases/metabolism , Oligonucleotide Array Sequence Analysis , Plant Epidermis/genetics , Plant Epidermis/growth & development , Plant Epidermis/metabolism , Plant Leaves/genetics , Plant Leaves/growth & development , Plant Leaves/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction/genetics , Signal Transduction/radiation effects
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