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1.
Sci Rep ; 12(1): 22613, 2022 12 30.
Article in English | MEDLINE | ID: mdl-36585417

ABSTRACT

Diabetic kidney disease (DKD) is a major public health issue because of its refractory nature. Ferroptosis is a newly coined programmed cell death characterized by the accumulation of lipid reactive oxygen species (ROS). However, the prognostic and diagnostic value of ferroptosis-related genes (FRGs) and their biological mechanisms in DKD remain elusive. The gene expression profiles GSE96804, GSE30566, GSE99339 and GSE30528 were obtained and analyzed. We constructed a reliable prognostic model for DKD consisting of eight FRGs (SKIL, RASA1, YTHDC2, SON, MRPL11, HSD17B14, DUSP1 and FOS). The receiver operating characteristic (ROC) curves showed that the ferroptosis-related model had predictive power with an area under the curve (AUC) of 0.818. Gene functional enrichment analysis showed significant differences between the DKD and normal groups, and ferroptosis played an important role in DKD. Consensus clustering analysis showed four different ferroptosis types, and the risk score of type four was significantly higher than that of other groups. Immune infiltration analysis indicated that the expression of macrophages M2 increased significantly, while that of neutrophils and mast cells activated decreased significantly in the high-risk group. Our study identified and validated the molecular mechanisms of ferroptosis in DKD. FRGs could serve as credible diagnostic biomarkers and therapeutic targets for DKD.


Subject(s)
Diabetes Mellitus , Diabetic Nephropathies , Ferroptosis , Humans , Ferroptosis/genetics , Diabetic Nephropathies/genetics , Apoptosis , Area Under Curve , Computational Biology , 17-Hydroxysteroid Dehydrogenases , p120 GTPase Activating Protein
2.
Int J Syst Evol Microbiol ; 69(10): 3161-3169, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31390326

ABSTRACT

During a survey of fungal diversity in a deserted rocky area in Yunnan, PR China, a new species, Memnoniella sinensis, was identified. This new species is characterized by having phialidic conidiogenous cells with conspicuous collarettes, and aseptate, verrucose, ellipsoidal to sometimes ovoid, olivaceous brown to dark brown conidia. Morphologically, M. sinensis is similar to M. dichroa, but can be easily distinguished due to its hyaline conidiophores and smaller conidia. Phylogenetic analysis based on DNA sequences at five loci showed that our strain grouped together with M. dichroa and M. oenanthes. Here, the new species is described and illustrated, and a key to the species of the genus Memnoniella is provided.


Subject(s)
Hypocreales/classification , Phylogeny , China , DNA, Fungal/genetics , Hypocreales/isolation & purification , Mycological Typing Techniques , Sequence Analysis, DNA , Spores, Fungal
3.
Sci Rep ; 7: 43183, 2017 02 24.
Article in English | MEDLINE | ID: mdl-28233806

ABSTRACT

To evaluate the impact of thyroid nodule sizes on the diagnostic performance of thyroid imaging reporting and data system (TIRADS) and ultrasound patterns of 2015 American Thyroid Association (ATA) guidelines. Total 734 patients with 962 thyroid nodules were recruited in this retrospective study. All nodules were divided into three groups according to the maximal diameter (d < 10 mm, d = 10-20 mm and d > 20 mm). The ultrasound images were categorized based on TIRADS and ATA ultrasound patterns, respectively. A total of 931 (96.8%) and 906 (94.2%) patterns met the criteria for TIRADS and ATA ultrasound patterns. The AUC (0.849) and sensitivity (85.3%) of TIRADS were highest in d = 10-20 mm group. However, ATA had highest AUC (0.839) and specificity (89.8%) in d > 20 mm group. ATA ultrasound patterns had higher specificity (P = 0.04), while TI-RADS had higher sensitivity (P = 0.02). In nodules d > 20 mm, the specificity of ATA patterns was higher than TIRADS (P = 0.003). Our results indicated that nodule sizes may influence the diagnostic performance of TIRADS and ATA ultrasound patterns. The ATA patterns may yield higher specificity than TIRADS, especially in nodules larger than 20 mm.


Subject(s)
Image Processing, Computer-Assisted/methods , Thyroid Gland/anatomy & histology , Thyroid Gland/pathology , Thyroid Neoplasms/diagnostic imaging , Ultrasonography/methods , Adult , Female , Humans , Image Processing, Computer-Assisted/standards , Male , Middle Aged , Practice Guidelines as Topic , Retrospective Studies , Sensitivity and Specificity , Ultrasonography/standards
4.
Endocrine ; 42(2): 375-81, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22644835

ABSTRACT

Adult Growth Hormone Deficiency (AGHD) is correlated to many adverse effects on metabolism and increased cardiovascular risk. Pregnancy-associated plasma protein-A (PAPP-A) is a protease that promotes IGF-I availability in vascular tissues in recent study, and PAPP-A levels have been proposed as an early predictor of cardiac events. The aim of our study was to compare PAPP-A levels in AGHD patients with that of healthy adult subjects to determine if there is a relationship between serum PAPP-A and glucose and lipid metabolism. Twenty AGHD patients and 20 healthy, age-matched and weight-matched persons were chosen for the study. Their weight, height, blood pressure, body mass index (BMI), body fat percentage, waist and hip circumference, and waist-hips ratio were assessed. An oral glucose tolerance test was performed and venous blood was collected from the each patient's cubital vein for biochemical analysis. Serum PAPP-A level in AGHD patients was significantly higher than that of the control group [(7.62 ± 1.62 vs. 6.54 ± 1.31) p < 0.05], and PAPP-A was positively correlated to age, BMI, waist circumference and so on. After adjusting for the waist circumference, waist-hip ratio, 2 h postprandial blood glucose, triglycerides, the serum PAPP-A in AGHD patients was positively correlated to the BMI (r = 0.728, p < 0.05) and fasting insulin (r = 0.433, p < 0.05). In a multiple step-wise regression analysis, BMI, 2 h postprandial glucose, fasting insulin, HOMA-IR were independently associated with serum PAPP-A in AGHD patients. The increase in serum PAPP-A levels is associated with abnormal glucose metabolism and increased risk of atherosclerosis in AGHD patients.


Subject(s)
Cardiovascular Diseases/epidemiology , Human Growth Hormone/deficiency , Pregnancy-Associated Plasma Protein-A/analysis , Adult , Age Factors , Aged , Atherosclerosis/epidemiology , Atherosclerosis/etiology , Body Mass Index , C-Reactive Protein/analysis , Cardiovascular Diseases/etiology , Female , Human Growth Hormone/blood , Human Growth Hormone/metabolism , Humans , Hyperglycemia/etiology , Hyperlipidemias/etiology , Insulin Resistance , Insulin-Like Growth Factor I/analysis , Male , Middle Aged , Regression Analysis , Risk Factors , Waist Circumference
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