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1.
Bioorg Chem ; 135: 106487, 2023 06.
Article in English | MEDLINE | ID: mdl-36996510

ABSTRACT

SIRT5 has been implicated in various physiological processes and human diseases, including cancer. Development of new highly potent, selective SIRT5 inhibitors is still needed to investigate disease-related mechanisms and therapeutic potentials. We here report new ε-N-thioglutaryllysine derivatives, which were designed according to SIRT5-catalysed deacylation reactions. These ε-N-thioglutaryllysine derivatives displayed potent SIRT5 inhibition, of which the potential photo-crosslinking derivative 8 manifested most potent inhibition with an IC50 value of 120 nM to SIRT5, and low inhibition to SIRT1-3 and SIRT6. The enzyme kinetic assays revealed that the ε-N-thioglutaryllysine derivatives inhibit SIRT5 by lysine-substrate competitive manner. Co-crystallographic analyses demonstrated that 8 binds to occupy the lysine-substate binding site by making hydrogen-bonding and electrostatic interactions with SIRT5-specific residues, and is likely positioned to react with NAD+ and form stable thio-intermediates. Compound 8 was observed to have low photo-crosslinking probability to SIRT5, possibly due to inappropriate position of the diazirine group as observed in SIRT5:8 crystal structure. This study provides useful information for developing drug-like inhibitors and cross-linking chemical probes for SIRT5-related studies.


Subject(s)
Sirtuins , Humans , Sirtuins/metabolism , Lysine/chemistry , Binding Sites
2.
Nature ; 560(7720): 582-588, 2018 08.
Article in English | MEDLINE | ID: mdl-30158607

ABSTRACT

The Newtonian gravitational constant, G, is one of the most fundamental constants of nature, but we still do not have an accurate value for it. Despite two centuries of experimental effort, the value of G remains the least precisely known of the fundamental constants. A discrepancy of up to 0.05 per cent in recent determinations of G suggests that there may be undiscovered systematic errors in the various existing methods. One way to resolve this issue is to measure G using a number of methods that are unlikely to involve the same systematic effects. Here we report two independent determinations of G using torsion pendulum experiments with the time-of-swing method and the angular-acceleration-feedback method. We obtain G values of 6.674184 × 10-11 and 6.674484 × 10-11 cubic metres per kilogram per second squared, with relative standard uncertainties of 11.64 and 11.61 parts per million, respectively. These values have the smallest uncertainties reported until now, and both agree with the latest recommended value within two standard deviations.

3.
Molecules ; 20(4): 5825-34, 2015 Apr 02.
Article in English | MEDLINE | ID: mdl-25849805

ABSTRACT

Three new pigment compounds--terreusinone A (1), pinophilin C (2) and cryptosporioptide A (3)-were isolated from a solid culture of Cordyceps gracilioides. The structures of these compounds were determined by extensive spectroscopic analysis including HRESIMS, 1D- and 2D-NMR. The structure of terreusinone A (1) was further confirmed by single-crystal X-ray crystallographic diffraction analysis. In an in vitro activity assay, 1, 2 and 3 exhibited high inhibitory activity against PTP1B, SHP2, CDC25B, LAR and SHP1. Terreusinone A (1) inhibited PTP1B, SHP2, CDC25B, LAR and SHP1 enzyme with IC50 values 12.5, >50, 4.1, 10.6, 5.6 µg/mL, respectively; pinophilin C (2) with IC50 values 6.8, 8.0, 4.5, 4.7, 3.4 µg/mL, respectively; and cryptosporioptide A (3) with IC50 values 7.3, 5.7, 7.6, >50, 4.9 µg/mL, respectively.


Subject(s)
Coleoptera/microbiology , Cordyceps/chemistry , Enzyme Inhibitors/pharmacology , Pigments, Biological/isolation & purification , Polyketides/isolation & purification , Protein Tyrosine Phosphatases/antagonists & inhibitors , Acrylates/chemistry , Acrylates/isolation & purification , Acrylates/pharmacology , Animals , Crystallography, X-Ray , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/isolation & purification , Molecular Structure , Pigments, Biological/chemistry , Pigments, Biological/pharmacology , Polyketides/chemistry , Polyketides/pharmacology
4.
Phys Rev Lett ; 102(24): 240801, 2009 Jun 19.
Article in English | MEDLINE | ID: mdl-19658992

ABSTRACT

We present a new value of the Newtonian gravitational constant G by using the time-of-swing method. Several improvements greatly reduce the uncertainties: (1) measuring the anelasticity of the fiber directly; (2) using spherical source masses minimizes the effects of density inhomogeneity and eccentricities; (3) using a quartz block pendulum simplifies its vibration modes and minimizes the uncertainty of inertial moment; (4) setting the pendulum and source masses both in a vacuum chamber reduces the error of measuring the relative positions. By two individual experiments, we obtain G = 6.673 49(18) x 10;{-11} m;{3} kg;{-1} s;{-2} with a standard uncertainty of about 2.6 parts in 10;{5}.

5.
Phys Rev Lett ; 98(20): 201101, 2007 May 18.
Article in English | MEDLINE | ID: mdl-17677684

ABSTRACT

A null experimental test of the Newtonian inverse-square law at submillimeter range using a torsion pendulum was presented. Under the dual modulations of both the expected signal and the gravitational torque for calibration, our data concluded with 95% confidence that no new forces were observed and any gravitational-strength Yukawa forces (|alpha|>or=1) must have a length scale lambda<66 microm, agreeing well with the latest result of the Eöt-wash group. Our result sets a unification energy scale of M*>or=2.8 TeV/c2 for the two compactified extra space dimensions with the same size R*<47 microm.

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