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1.
BMC Res Notes ; 17(1): 33, 2024 Jan 23.
Article in English | MEDLINE | ID: mdl-38263080

ABSTRACT

OBJECTIVES: Phenotyping plants in a field environment can involve a variety of methods including the use of automated instruments and labor-intensive manual measurement and scoring. Researchers also collect language-based phenotypic descriptions and use controlled vocabularies and structures such as ontologies to enable computation on descriptive phenotype data, including methods to determine phenotypic similarities. In this study, spoken descriptions of plants were collected and observers were instructed to use their own vocabulary to describe plant features that were present and visible. Further, these plants were measured and scored manually as part of a larger study to investigate whether spoken plant descriptions can be used to recover known biological phenomena. DATA DESCRIPTION: Data comprise phenotypic observations of 686 accessions of the maize Wisconsin Diversity panel, and 25 positive control accessions that carry visible, dramatic phenotypes. The data include the list of accessions planted, field layout, data collection procedures, student participants' (whose personal data are protected for ethical reasons) and volunteers' observation transcripts, volunteers' audio data files, terrestrial and aerial images of the plants, Amazon Web Services method selection experimental data, and manually collected phenotypes (e.g., plant height, ear and tassel features, etc.; measurements and scores). Data were collected during the summer of 2021 at Iowa State University's Agricultural Engineering and Agronomy Research Farms.


Subject(s)
Agriculture , Humans , Wisconsin , Data Collection , Farms , Phenotype
2.
Plant Direct ; 6(2): e381, 2022 Feb.
Article in English | MEDLINE | ID: mdl-35141460

ABSTRACT

Asian corn borer, Ostrinia furnacalis (Guenée), is an important insect pest of maize throughout most of Asia. The rind of a maize stalk is a key barrier against corn borer larvae boring into the plant. There is a need to better understand the relationship between stalk strength and O. furnacalis larval injury, particularly for elite maize genotypes. To determine whether stalk strength is involved in maize resistance to O. furnacalis larval injury, 39 maize lines were evaluated in 2012 and 2013. Rind penetration strength (RPS) was measured at tassel (VT) and milk (R3) stages as a possible stalk resistance trait for O. furnacalis. RPS of primary ear internode at VT and R3 accounted for 37 and 38% of the variance in O. furnacalis injury (measured as number of holes) for simulated (artificially infested) first and second generation O. furnacalis, respectively. Relationships between stalk RPS values and tunnel length were weak. Results suggest that harder stalks have enhanced resistance to stalk boring but not to pith feeding or tunneling of O. furnacalis larvae. The RPS measures could provide classical maize breeders an important tool for evaluating stalk strength and corn borer resistance in maize. The assessments should focus on the internodes primary ear or above/below primary ear during both VT stage for first generation and R3 stage for second generation O. furnacalis resistance.

3.
PLoS One ; 14(4): e0215414, 2019.
Article in English | MEDLINE | ID: mdl-30990862

ABSTRACT

Corn earworm (CEW), Helicoverpa zea (Boddie), (Lepidoptera: Noctuidae), is a major insect pest of corn (Zea mays spp. mays L.). CEW larvae feed on silks, kernels and cobs, causing substantial yield and quality losses both through herbivory and by vectoring pathogens. The long-term goal of this work is to elucidate the genetic and biochemical basis of a potentially novel CEW resistance source discovered in silk tissue of Piura 208, a Peruvian landrace of maize (PI 503849). We developed a quantitative CEW bioassay and tested it on four populations that contrast alleles from Piura 208 with those from GT119, a CEW-susceptible maize inbred line. In replicated analyses of two populations of F1:2 families, corn genotype accounts for 84% and 68% of the variance in CEW larval weights, and up to 60% of the variance in CEW pupation percentage, demonstrating both the success of the quantitative bioassay and the strength of the Piura 208 resistance mechanism. Analyses of two corresponding populations of BC1:2 families revealed substantially diminished effects of corn genotype on CEW weight gain and pupation. This loss of Piura 208-derived CEW resistance during backcrossing suggests complex (multi-genic) inheritance of a threshold-dependent mechanism. Technical factors in bioassay performance were also assessed, often by analyzing the 1,641 CEW larvae that were raised on control diet (meridic with no corn silks added). Minor, but statistically significant impacts on CEW weight gain, pupation, and mortality were attributable to multiple technical factors in the preparation, incubation and evaluation phases of the bioassay, demonstrating the importance of randomization, stratification, replication, and variable-tracking across the many steps of this quantitative CEW bioassay. Overall, these findings indicate that this scaled-up, quantitative CEW bioassay is fundamentally sound and that Piura 208-derived resistance alleles are experimentally tractable for genetic and mechanistic research using this approach.


Subject(s)
Biological Assay , Disease Resistance , Herbivory , Moths/growth & development , Pest Control, Biological , Plant Diseases/parasitology , Zea mays/parasitology , Animals
4.
Genetica ; 139(8): 961-72, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21822602

ABSTRACT

The European corn borer, Ostrinia nubilalis (Lepidoptera: Crambidae), is an introduced crop pest in North America that causes major damage to corn and reduces yield of food, feed, and biofuel materials. The Cry1F toxin from Bacillus thuringiensis (Bt) expressed in transgenic hybrid corn is highly toxic to O. nubilalis larvae and effective in minimizing feeding damage. A laboratory colony of O. nubilalis was selected for high levels of Cry1F resistance (>12,000-fold compared to susceptible larvae) and is capable of survival on transgenic hybrid corn. Genetic linkage maps with segregating AFLP markers show that the Cry1F resistance trait is controlled by a single quantitative trait locus (QTL) on linkage group 12. The map position of single nucleotide polymorphism (SNP) markers indicated that midgut Bt toxin-receptor genes, alkaline phosphatase, aminopeptidase N, and cadherin, are not linked with the Cry1F QTL. Evidence suggests that genes within this genome interval may give rise to a novel Bt toxin resistance trait for Lepidoptera that appears independent of known receptor-based mechanisms of resistance.


Subject(s)
Bacterial Toxins/toxicity , Drug Resistance/genetics , Gene Expression Regulation/genetics , Insect Proteins/genetics , Lepidoptera/drug effects , Lepidoptera/genetics , Quantitative Trait Loci/genetics , Amplified Fragment Length Polymorphism Analysis , Animals , Bacillus thuringiensis/genetics , Bacterial Toxins/genetics , Chromosome Mapping , DNA/genetics , DNA/isolation & purification , Female , Gene Expression Regulation/drug effects , Larva/drug effects , Larva/genetics , Larva/physiology , Lepidoptera/physiology , Male , Pedigree , Phenotype , Plants, Genetically Modified , Polymorphism, Single Nucleotide/genetics
5.
J Invertebr Pathol ; 105(3): 248-53, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20673768

ABSTRACT

Infection with Nosema pyrausta Paillot lengthens developmental period of Bt-susceptible Ostrinia nubilalis (Hübner) to a similar extent as feeding on Cry1Ab-incorporated diet in Cry1Ab-resistant O. nubilalis, and these two factors combined lengthen developmental period further than either alone. Resistant O. nubilalis mating with infected susceptible, or infected resistant partners would produce partially- and fully-resistant offspring, respectively, infected with N. pyrausta. To investigate the impacts on the progeny of such matings, test crosses were set up to produce partially- and fully Cry1Ab-resistant O. nubilalis offspring transovarially infected and not infected with N. pyrausta, which were exposed to Cry1Ab toxin at doses of 0, 3, or 30ng/cm(2) for 7days. Transovarial infection with N. pyrausta significantly decreased 7day survival of partially and fully-resistant O. nubilalis feeding on 30ng/cm(2) Cry1Ab. In addition, N. pyrausta infection delayed larval development (as measured by weight) of partially- and fully-resistant O. nubilalis feeding on 3 and 30ng/cm(2) Cry1Ab. Impacts of natural enemies on target pests may have the potential to impact evolution of resistance. N pyrausta-infected O. nubilalis are more strongly affected by feeding on Bt, and would be less likely to survive to adulthood to pass on resistance to the next generation. This indigenous microsporidium may work to delay evolution of resistance in O. nubilalis by lowering their ability to survive on Bt.


Subject(s)
Insecticide Resistance , Moths/microbiology , Pest Control, Biological , Animals , Bacillus thuringiensis/genetics , Bacillus thuringiensis Toxins , Bacterial Proteins/genetics , Endotoxins/genetics , Hemolysin Proteins/genetics , Larva/growth & development , Larva/microbiology , Mycoses , Nosema , Plants, Genetically Modified
6.
Pest Manag Sci ; 64(1): 30-6, 2008 Jan.
Article in English | MEDLINE | ID: mdl-17912680

ABSTRACT

BACKGROUND: Estimates of arthropod population size may paradoxically increase following insecticide applications. Research with ground beetles (Coleoptera: Carabidae) suggests that such unusual results reflect increased arthropod movement and capture in traps rather than real changes in population size. However, it is unclear whether direct (hyperactivity) or indirect (prey-mediated) mechanisms produce increased movement. RESULTS: Video tracking of Scarites quadriceps Chaudior indicated that brief exposure to lambda-cyhalothrin or tefluthrin increased total distance moved, maximum velocity and percentage of time moving. Repeated measurements on individual beetles indicated that movement decreased 240 min after initial lambda-cyhalothrin exposure, but increased again following a second exposure, suggesting hyperactivity could lead to increased trap captures in the field. Two field experiments in which ground beetles were collected after lambda-cyhalothrin or permethrin application attempted to detect increases in population size estimates as a result of hyperactivity. Field trials used mark-release-recapture methods in small plots and natural carabid populations in larger plots, but found no significant short-term (<6 day) increases in beetle trap captures. CONCLUSION: The disagreement between laboratory and field results suggests mechanisms other than hyperactivity may better explain unusual changes in population size estimates. When traps are used as a primary sampling tool, unexpected population-level effects should be interpreted carefully or with additional data less influenced by arthropod activity.


Subject(s)
Coleoptera/drug effects , Coleoptera/physiology , Insecticides/pharmacology , Motor Activity/drug effects , Animals , Population Density , Predatory Behavior
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