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1.
Article in English | MEDLINE | ID: mdl-38157943

ABSTRACT

BACKGROUND: The cytokine TSLP promotes type 2 immune responses and can induce adipose loss by stimulating lipid loss from the skin through sebum secretion by sebaceous glands, which enhances the skin barrier. However, the mechanism by which TSLP upregulates sebaceous gland function is unknown. OBJECTIVES: This study investigated the mechanism by which TSLP stimulates sebum secretion and adipose loss. METHODS: RNA-sequencing analysis was performed on sebaceous glands isolated by laser capture microdissection and single-cell RNA-sequencing analysis was performed on sorted skin T cells. Sebocyte function was analyzed by histological analysis and sebum secretion in vivo and by measuring lipogenesis and proliferation in vitro. RESULTS: This study found that TSLP sequentially stimulated the expression of lipogenesis genes followed by cell death genes in sebaceous glands to induce holocrine secretion of sebum. TSLP did not affect sebaceous gland activity directly. Rather, single-cell RNA-sequencing revealed that TSLP recruited distinct T-cell clusters that produce IL-4 and IL-13, which were necessary for TSLP-induced adipose loss and sebum secretion. Moreover, IL-13 was sufficient to cause sebum secretion and adipose loss in vivo and to induce lipogenesis and proliferation of a human sebocyte cell line in vitro. CONCLUSIONS: This study proposes that TSLP stimulates T cells to deliver IL-4 and IL-13 to sebaceous glands, which enhances sebaceous gland function, turnover, and subsequent adipose loss.

2.
Signal Transduct Target Ther ; 8(1): 79, 2023 02 24.
Article in English | MEDLINE | ID: mdl-36823147

ABSTRACT

Innate immunity represents one of the main host responses to viral infection.1-3 STING (Stimulator of interferon genes), a crucial immune adapter functioning in host cells, mediates cGAS (Cyclic GMP-AMP Synthase) sensing of exogenous and endogenous DNA fragments and generates innate immune responses.4 Whether STING activation was involved in infection and replication of enterovirus remains largely unknown. In the present study, we discovered that human enterovirus A71 (EV-A71) infection triggered STING activation in a cGAS dependent manner. EV-A71 infection caused mitochondrial damage and the discharge of mitochondrial DNA into the cytosol of infected cells. However, during EV-A71 infection, cGAS-STING activation was attenuated. EV-A71 proteins were screened and the viral protease 2Apro had the greatest capacity to inhibit cGAS-STING activation. We identified TRAF3 as an important factor during STING activation and as a target of 2Apro. Supplement of TRAF3 rescued cGAS-STING activation suppression by 2Apro. TRAF3 supported STING activation mediated TBK1 phosphorylation. Moreover, we found that 2Apro protease activity was essential for inhibiting STING activation. Furthermore, EV-D68 and CV-A16 infection also triggered STING activation. The viral protease 2Apro from EV-D68 and CV-A16 also had the ability to inhibit STING activation. As STING activation prior to EV-A71 infection generated cellular resistance to EV-A71 replication, blocking EV-A71-mediated STING suppression represents a new anti-viral target.


Subject(s)
Enterovirus A, Human , Membrane Proteins , TNF Receptor-Associated Factor 3 , Humans , Antigens, Viral , Enterovirus A, Human/physiology , Nucleotidyltransferases/genetics , TNF Receptor-Associated Factor 3/genetics , Viral Proteases , Immunity, Innate
3.
Comput Biol Med ; 153: 106533, 2023 02.
Article in English | MEDLINE | ID: mdl-36638617

ABSTRACT

Breast mass is one of the main clinical symptoms of breast cancer. Recently, many CNN-based methods for breast mass segmentation have been proposed. However, these methods have difficulties in capturing long-range dependencies, causing poor segmentation of large-scale breast masses. In this paper, we propose an axial Transformer and feature enhancement-based CNN (ATFE-Net) for ultrasound breast mass segmentation. Specially, an axial Transformer (Axial-Trans) module and a Transformer-based feature enhancement (Trans-FE) module are proposed to capture long-range dependencies. Axial-Trans module only calculates self-attention in width and height directions of input feature maps, which reduces the complexity of self-attention significantly from O(n2) to O(n). In addition, Trans-FE module can enhance feature representation by capturing dependencies between different feature layers, since deeper feature layers have richer semantic information and shallower feature layers have more detailed information. The experimental results show that our ATFE-Net achieved better performance than several state-of-the-art methods on two publicly available breast ultrasound datasets, with Dice coefficient of 82.46% for BUSI and 86.78% for UDIAT, respectively.


Subject(s)
Image Processing, Computer-Assisted , Semantics , Ultrasonography
4.
J Med Virol ; 95(1): e28310, 2023 01.
Article in English | MEDLINE | ID: mdl-36377393

ABSTRACT

Cellular infections by DNA viruses trigger innate immune responses mediated by DNA sensors. The cyclic GMP-AMP synthase (cGAS)-stimulator of interferon gene (STING) signaling pathway has been identified as a DNA-sensing pathway that activates interferons in response to viral infection and, thus, mediates host defense against viruses. Previous studies have identified oncogenes E7 and E1A of the DNA tumor viruses, human papillomavirus 18 (HPV18) and adenovirus, respectively, as inhibitors of the cGAS-STING pathway. However, the function of STING in infected cells and the mechanism by which HPV18 E7 antagonizes STING-induced Interferon beta production remain unknown. We report that HPV18 E7 selectively antagonizes STING-triggered nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) activation but not IRF3 activation. HPV18 E7 binds to STING in a region critical for NF-κB activation and blocks the nuclear accumulation of p65. Moreover, E7 inhibition of STING-triggered NF-κB activation is related to HPV pathogenicity but not E7-Rb binding. HPV18 E7, severe acute respiratory syndrome coronavirus-2 open reading frame 3a, human immunodeficiency virus-2 viral protein X, and Kaposi's sarcoma-associated herpesvirus KSHV viral interferon regulatory factor 1 selectively inhibited STING-triggered NF-κB or IRF3 activation, suggesting a convergent evolution among these viruses toward antagonizing host innate immunity. Collectively, selective suppression of the cGAS-STING pathway by viral proteins is likely to be a key pathogenic determinant, making it a promising target for treating oncogenic virus-induced tumor diseases.


Subject(s)
COVID-19 , NF-kappa B , Humans , NF-kappa B/metabolism , Interferon-beta/genetics , Human papillomavirus 18/genetics , Nucleotidyltransferases/genetics , Nucleotidyltransferases/metabolism , Immunity, Innate , DNA , DNA Viruses/genetics , DNA Viruses/metabolism , Oncogene Proteins
5.
Med Biol Eng Comput ; 60(7): 2051-2062, 2022 Jul.
Article in English | MEDLINE | ID: mdl-35553003

ABSTRACT

Breast cancer is a common life-threatening disease among women. Computer-aided methods can provide second opinion or decision support for early diagnosis in mammography images. However, the whole images classification is highly challenging due to small sizes of lesion and slow contrast between lesions and fibro-glandular tissue. In this paper, inspired by conventional machine learning methods, we present a Multi Frequency Attention Network (MFA-Net) to highlight the salient features. The network decomposes the features into low spatial frequency components and high spatial frequency components, and then recalibrates discriminating features based on two-dimensional Discrete Cosine Transform in two different frequency parts separately. Low spatial frequency features help determine if there is a tumor while high spatial frequency features help focus more on the margin of the tumor. Our studies empirically show that compared to traditional convolutional neural network (CNN), the proposed method mitigates the influence of the margin of pectoral muscle and breast in mammography, which brings significant improvement. For malignant and benign classification, by using transfer learning, the proposed MFA-Net achieves the AUC index 91.71% on the INbreast dataset.


Subject(s)
Breast Neoplasms , Mammography , Breast/diagnostic imaging , Breast/pathology , Breast Neoplasms/diagnostic imaging , Breast Neoplasms/pathology , Female , Humans , Machine Learning , Mammography/methods , Margins of Excision , Neural Networks, Computer
7.
Comput Biol Med ; 137: 104800, 2021 10.
Article in English | MEDLINE | ID: mdl-34507155

ABSTRACT

Breast mass segmentation in mammograms is still a challenging and clinically valuable task. In this paper, we propose an effective and lightweight segmentation model based on convolutional neural networks to automatically segment breast masses in whole mammograms. Specifically, we first developed feature strengthening modules to enhance relevant information about masses and other tissues and improve the representation power of low-resolution feature layers with high-resolution feature maps. Second, we applied a parallel dilated convolution module to capture the features of different scales of masses and fully extract information about the edges and internal texture of the masses. Third, a mutual information loss function was employed to optimise the accuracy of the prediction results by maximising the mutual information between the prediction results and the ground truth. Finally, the proposed model was evaluated on both available INbreast and CBIS-DDSM datasets, and the experimental results indicated that our method achieved excellent segmentation performance in terms of dice coefficient, intersection over union, and sensitivity metrics.


Subject(s)
Image Processing, Computer-Assisted , Mammography , Breast/diagnostic imaging , Neural Networks, Computer
8.
Front Oncol ; 11: 685912, 2021.
Article in English | MEDLINE | ID: mdl-34322386

ABSTRACT

OBJECTIVE: LncRNA SOX2-OT is involved in a variety of cancers. This study explored the effect of lncRNA SOX2-OT on hepatocellular carcinoma (HCC) cells. METHODS: SOX2-OT expressions were detected in HCC tissues and normal tissues, normal cells, and HCC cells. The relationship between SOX2-OT and prognosis was analyzed by TCGA. After SOX2-OT expression was inhibited using siRNA, HCC cell malignant behaviors were evaluated. The subcellular localization of SOX2-OT in HCC cells was predicted and analyzed. The binding relationships among SOX2-OT, miR-143-3p, and MSI2 were analyzed by bioinformatics website, dual-luciferase assay, and RNA pull-down assay. The effect of miR-143-3p and MSI2 on the regulation of SOX2-OT on biological behaviors of HCC cells was confirmed by functional rescue experiments. The effect of SOX2-OT on the tumorigenicity of HCC was evaluated by subcutaneous tumorigenesis in nude mice. RESULTS: SOX2-OT was highly expressed in HCC cells and tissues. The prognosis was poor in HCC patients with high SOX2-OT expression. Downregulating SOX2-OT inhibited HCC cell malignant behaviors. SOX2-OT bound to miR-143-3p to promote MSI2 expression. Downregulating miR-143-3p or upregulating MSI2 averted the role of si-SOX2-OT in HCC cells. Nude mouse subcutaneous tumorigenesis showed that SOX2-OT downregulation decreased the tumorigenicity of HCC, and affected the levels of miR-143-3p and MSI2 mRNA in tumor tissues. CONCLUSION: SOX2-OT inhibited the targeted inhibition of miR-143-3p on MSI2 through competitively binding to miR-143-3p, thus promoting MSI2 expression and proliferation, invasion, and migration of HCC cells.

9.
Cell Death Dis ; 12(7): 683, 2021 07 07.
Article in English | MEDLINE | ID: mdl-34234118

ABSTRACT

Ribonucleotide reductase (RR) is a unique enzyme for the reduction of NDPs to dNDPs, the building blocks for DNA synthesis and thus essential for cell proliferation. Pan-cancer profiling studies showed that RRM2, the small subunit M2 of RR, is abnormally overexpressed in multiple types of cancers; however, the underlying regulatory mechanisms in cancers are still unclear. In this study, through searching in cancer-omics databases and immunohistochemistry validation with clinical samples, we showed that the expression of MYBL2, a key oncogenic transcriptional factor, was significantly upregulated correlatively with RRM2 in colorectal cancer (CRC). Ectopic expression and knockdown experiments indicated that MYBL2 was essential for CRC cell proliferation, DNA synthesis, and cell cycle progression in an RRM2-dependent manner. Mechanistically, MYBL2 directly bound to the promoter of RRM2 gene and promoted its transcription during S-phase together with TAF15 and MuvB components. Notably, knockdown of MYBL2 sensitized CRC cells to treatment with MK-1775, a clinical trial drug for inhibition of WEE1, which is involved in a degradation pathway of RRM2. Finally, mouse xenograft experiments showed that the combined suppression of MYBL2 and WEE1 synergistically inhibited CRC growth with a low systemic toxicity in vivo. Therefore, we propose a new regulatory mechanism for RRM2 transcription for CRC proliferation, in which MYBL2 functions by constituting a dynamic S-phase transcription complex following the G1/early S-phase E2Fs complex. Doubly targeting the transcription and degradation machines of RRM2 could produce a synthetic inhibitory effect on RRM2 level with a novel potential for CRC treatment.


Subject(s)
Antineoplastic Agents/pharmacology , Cell Cycle Proteins/antagonists & inhibitors , Cell Cycle Proteins/metabolism , Colorectal Neoplasms/enzymology , Enzyme Inhibitors/pharmacology , Gene Knockdown Techniques , Protein-Tyrosine Kinases/antagonists & inhibitors , Pyrazoles/pharmacology , Pyrimidinones/pharmacology , Ribonucleoside Diphosphate Reductase/metabolism , Trans-Activators/metabolism , Animals , Cell Cycle Proteins/genetics , Cell Proliferation/drug effects , Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , Databases, Genetic , Gene Expression Regulation, Neoplastic , HCT116 Cells , Humans , Male , Mice, Inbred BALB C , Mice, Nude , Protein-Tyrosine Kinases/metabolism , Ribonucleoside Diphosphate Reductase/genetics , Signal Transduction , Trans-Activators/genetics , Tumor Burden/drug effects , Xenograft Model Antitumor Assays
10.
Am J Transl Res ; 13(5): 4322-4341, 2021.
Article in English | MEDLINE | ID: mdl-34150017

ABSTRACT

Ovarian carcinoma is one of the major causes of gynecological cancer. This study aimed to evaluate the association of CYP1 family polymorphism with the risk of ovarian carcinoma and chemotherapy resistance. Positive selection was detected among human CYP1A1, CYP1A2, and CYP1B1, and other species. Several positive sites were detected by site models and brach-site models. Meta-analysis was conducted for the sites rs1056836 (MAF 0.39) and rs1056827 (MAF 0.36) of CYP1B1 to clarify the association between gene polymorphisms and ovarian carcinoma risk. Subgroup analysis showed the association of rs1056836 polymorphism with ovarian cancer risk among Caucasians and Asians, while all the six genetic models showed no association among African-Americans. All the six genetic models showed no association of rs1056827 polymorphism with ovarian cancer risk. The polymorphisms of rs1056836 associated with ovarian cancer risk were detected in chemotherapy-sensitive and drug-resistant ovarian cancer patients. DNA was extracted from 62 chemotherapy resistance Ovarian carcinoma tissue samples and 137 chemotherapy-sensitive ovarian carcinoma tissue samples as controls. Gene polymorphisms were genotyped using the Sequenom MassARRAY SNP approach. There was no significant association between the CYP1B1 rs1056836 polymorphism and chemotherapy resistance of ovarian cancer in all genetic models. The results suggest that rs1056836 polymorphism of gene CYP1B1 under obvious selection pressure had a significantly increased risk for ovarian carcinoma. However, it had no significant correlation with chemotherapy resistance of ovarian cancer.

11.
Cell ; 184(15): 3981-3997.e22, 2021 07 22.
Article in English | MEDLINE | ID: mdl-34157301

ABSTRACT

A fraction of mature T cells can be activated by peripheral self-antigens, potentially eliciting host autoimmunity. We investigated homeostatic control of self-activated T cells within unperturbed tissue environments by combining high-resolution multiplexed and volumetric imaging with computational modeling. In lymph nodes, self-activated T cells produced interleukin (IL)-2, which enhanced local regulatory T cell (Treg) proliferation and inhibitory functionality. The resulting micro-domains reciprocally constrained inputs required for damaging effector responses, including CD28 co-stimulation and IL-2 signaling, constituting a negative feedback circuit. Due to these local constraints, self-activated T cells underwent transient clonal expansion, followed by rapid death ("pruning"). Computational simulations and experimental manipulations revealed the feedback machinery's quantitative limits: modest reductions in Treg micro-domain density or functionality produced non-linear breakdowns in control, enabling self-activated T cells to subvert pruning. This fine-tuned, paracrine feedback process not only enforces immune homeostasis but also establishes a sharp boundary between autoimmune and host-protective T cell responses.


Subject(s)
Feedback, Physiological , Homeostasis/immunology , Lymphocyte Activation/immunology , T-Lymphocytes, Regulatory/immunology , Animals , Autoantigens/immunology , CD4-Positive T-Lymphocytes/immunology , Cell Proliferation , Interleukin-2/metabolism , Membrane Microdomains/metabolism , Mice, Inbred C57BL , Models, Immunological , Paracrine Communication , Signal Transduction
12.
Med Phys ; 48(8): 4291-4303, 2021 Aug.
Article in English | MEDLINE | ID: mdl-34061371

ABSTRACT

PURPOSE: Breast mass segmentation in mammograms remains a crucial yet challenging topic in computer-aided diagnosis systems. Existing algorithms mainly used mass-centered patches to achieve mass segmentation, which is time-consuming and unstable in clinical diagnosis. Therefore, we aim to directly perform fully automated mass segmentation in whole mammograms with deep learning solutions. METHODS: In this work, we propose a novel dual contextual affinity network (a.k.a., DCANet) for mass segmentation in whole mammograms. Based on the encoder-decoder structure, two lightweight yet effective contextual affinity modules including the global-guided affinity module (GAM) and the local-guided affinity module (LAM) are proposed. The former aggregates the features integrated by all positions and captures long-range contextual dependencies, aiming to enhance the feature representations of homogeneous regions. The latter emphasizes semantic information around each position and exploits contextual affinity based on the local field-of-view, aiming to improve the indistinction among heterogeneous regions. RESULTS: The proposed DCANet is greatly demonstrated on two public mammographic databases including the DDSM and the INbreast, achieving the Dice similarity coefficient (DSC) of 85.95% and 84.65%, respectively. Both segmentation performance and computational efficiency outperform the current state-of-the-art methods. CONCLUSION: According to extensive qualitative and quantitative analyses, we believe that the proposed fully automated approach has sufficient robustness to provide fast and accurate diagnoses for possible clinical breast mass segmentation.


Subject(s)
Mammography , Neural Networks, Computer , Breast/diagnostic imaging , Databases, Factual , Diagnosis, Computer-Assisted , Humans , Image Processing, Computer-Assisted
13.
Signal Transduct Target Ther ; 6(1): 123, 2021 03 15.
Article in English | MEDLINE | ID: mdl-33723219

ABSTRACT

The emergence of SARS-CoV-2 has resulted in the COVID-19 pandemic, leading to millions of infections and hundreds of thousands of human deaths. The efficient replication and population spread of SARS-CoV-2 indicates an effective evasion of human innate immune responses, although the viral proteins responsible for this immune evasion are not clear. In this study, we identified SARS-CoV-2 structural proteins, accessory proteins, and the main viral protease as potent inhibitors of host innate immune responses of distinct pathways. In particular, the main viral protease was a potent inhibitor of both the RLR and cGAS-STING pathways. Viral accessory protein ORF3a had the unique ability to inhibit STING, but not the RLR response. On the other hand, structural protein N was a unique RLR inhibitor. ORF3a bound STING in a unique fashion and blocked the nuclear accumulation of p65 to inhibit nuclear factor-κB signaling. 3CL of SARS-CoV-2 inhibited K63-ubiquitin modification of STING to disrupt the assembly of the STING functional complex and downstream signaling. Diverse vertebrate STINGs, including those from humans, mice, and chickens, could be inhibited by ORF3a and 3CL of SARS-CoV-2. The existence of more effective innate immune suppressors in pathogenic coronaviruses may allow them to replicate more efficiently in vivo. Since evasion of host innate immune responses is essential for the survival of all viruses, our study provides insights into the design of therapeutic agents against SARS-CoV-2.


Subject(s)
Immunity, Innate , Membrane Proteins/immunology , Nucleotidyltransferases/immunology , RNA, Viral/immunology , SARS-CoV-2/immunology , Signal Transduction/immunology , Viral Proteins/immunology , A549 Cells , Animals , Chickens , HEK293 Cells , HeLa Cells , Humans , Ligases/immunology , Mice
14.
Oncol Lett ; 21(1): 8, 2021 Jan.
Article in English | MEDLINE | ID: mdl-33240414

ABSTRACT

Epigenetic inactivation of GADD45A is a common occurrence in different types of cancer. However, little is known regarding its association with radiosensitivity in cervical cancer (CC). Thus, the present study aimed to investigate the association between aberrant GADD45A methylation and radiosensitivity in CC. SiHa, HeLa and CaSki CC cells were treated with 5-azacytidine (5-azaC), with or without irradiation. The expression levels of GADD45A and AKT related molecules were detected via reverse transcription-quantitative PCR and western blot analyses. The methylation status of GADD45A was assessed via methylation-specific PCR and cell proliferation assays, while clonogenic assays and flow cytometric analysis were performed to assess the function of the genes (GADD45A and AKT) in the CC cell lines. The results demonstrated that methylation of GADD45A was significantly higher in the radioresistant tissues (63.16%) compared with the radiosensitive samples (33.33%). In addition, the surviving fraction of SiHa cells following irradiation with 2 Gy was demonstrated to be highest amongst the three CC cells (CaSki, 57±9.5%; HeLa, 70±4% and SiHa, 75±10%). The survival rate of SiHa cells following treatment with 5-azaC and ionizing radiation (IR) significantly decreased as the radiation dose increased, compared with treatment with IR alone. Following overexpression of GADD45A or treatment with 5-azaC, the radiosensitivity of SiHa cells significantly increased compared with both the control vector and PBS treated groups. In addition, the AKT inhibitor, MK-2206, increased the radiosensitivity of SiHa cells. Notably, aberrant methylation of GADD45A was associated with decreased radiosensitivity in CC, and the PI3K/AKT signaling pathway was essential for radioresistance, which was mediated through downregulation of GADD45A.

15.
J Agric Food Chem ; 68(51): 15176-15185, 2020 Dec 23.
Article in English | MEDLINE | ID: mdl-33291872

ABSTRACT

Gastrointestinal tract (GIT) responses to a high-amylose resistant starch (RS) product were compared to those observed when RS was combined with whole grain (WG) and to controls with low RS intake in rats fed moderate or high fat diets. Regardless of fat intake, rats fed RS or WG + RS diets had higher cecum weights, higher intestinal quantities of short chain fatty acids, and lower intestinal content pH, and their GIT cells had increased gene expression for gluconeogenesis and barrier function compared to controls. Whereas RS resulted in greater GIT content acetate and propionate and lowest pH, the WG + RS diets yielded higher butyrate. Rats fed the RS diet with MF had higher cecum weights than those fed either the RS diet with HF or the WG + RS diet with either MF or HF. Diets containing combinations of RS and other dietary fibers should be considered for RS-mediated GIT benefits.


Subject(s)
Amylose/analysis , Flour/analysis , Intestinal Mucosa/metabolism , Resistant Starch/metabolism , Whole Grains/metabolism , Amylose/metabolism , Animals , Cecum/metabolism , Diet, High-Fat , Fatty Acids, Volatile/metabolism , Intestines , Male , Rats , Rats, Sprague-Dawley , Resistant Starch/analysis , Whole Grains/chemistry
16.
Front Oncol ; 10: 576615, 2020.
Article in English | MEDLINE | ID: mdl-33194689

ABSTRACT

Background: Most colon adenocarcinoma (COAD) patients die of distant metastasis, though there are some therapies for metastatic COAD. However, the genes exclusively expressed in metastatic COAD remain unclear. This study aims to identify prognosis-related genes associated with distant metastasis and develop therapeutic strategies for COAD patients. Methods: Transcriptomic data from The Cancer Genome Atlas (TCGA; n = 514) cohort were analyzed as a discovery dataset. Next, the data from the GEPIA database and PROGgeneV2 database were used to validate our analysis. Key genes were identified based on the differential miRNA and mRNA expression with respect to M stage. The potential drugs targeting candidate differentially expressed genes (DEGs) were also investigated. Results: A total of 127 significantly DEGs in patients with distant metastasis compared with patients without distant metastasis were identified. Then, four prognosis-related genes (LEP, DLX2, CLSTN2, and REG3A) were selected based on clustering analysis and survival analysis. Finally, three compounds targeting the candidate DEGs, including ajmaline, TTNPB, and dydrogesterone, were predicted to be potential drugs for COAD. Conclusions: This study revealed that distant metastasis in COAD is associated with a specific group of genes, and three existing drugs may suppress the distant metastasis of COAD.

17.
Sci Rep ; 10(1): 20454, 2020 11 24.
Article in English | MEDLINE | ID: mdl-33235305

ABSTRACT

Sleep disorder (SD) has a high incidence and seriously affects quality of life, mental health and even the manifestation of physical diseases. The combination of Pinellia ternata (Chinese name: banxia) and Prunella vulgaris (Chinese name: xiakucao), known as the Banxia-Xiakucao Chinese herb pair (BXHP), is a proven Chinese herbal medicine that has been used to treat SD for thousands of years due to its significant clinical effects. However, its active pharmacological components and sedative-hypnotic mechanisms have not been fully elucidated. Thus, the present study used a systematic pharmacological approach to develop pharmacokinetic screens and target predictions via construction of a protein-protein interaction network and annotation database for SD-related and putative BXHP-related targets. Visualization, screening and integrated discovery enrichment analyses were conducted. The BXHP chemical database contains 166 compounds between the two herbal ingredients, and of these, 22 potential active molecules were screened by pharmacokinetic evaluation. The targets of 114 of the active molecules were predicted, and 34 were selected for further analysis. Finally, gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses suggested that BXHP can reduce inflammatory responses. and mediate immune-related and central nervous system neurotransmitters via regulation of multiple targets and pathways. The use of a systematic pharmacology-based approach in the present study further elucidated the mechanisms of action underlying BXHP for the treatment of SD from a holistic perspective and sheds light on the systemic mechanisms of action of Chinese herbal medicines in general.


Subject(s)
Drugs, Chinese Herbal/pharmacology , Pinellia/chemistry , Prunella/chemistry , Systems Biology/methods , Databases, Chemical , Drugs, Chinese Herbal/therapeutic use , Gene Expression Regulation/drug effects , Gene Ontology , Humans , Protein Interaction Maps/drug effects , Quality of Life , Sleep Wake Disorders/drug therapy , Sleep Wake Disorders/metabolism
18.
J Cell Sci ; 133(5)2020 03 06.
Article in English | MEDLINE | ID: mdl-32144196

ABSTRACT

A hallmark of the mammalian immune system is its ability to respond efficiently to foreign antigens without eliciting an inappropriate response to self-antigens. Furthermore, a robust immune response requires the coordination of a diverse range of cells present at low frequencies within the host. This problem is solved, in part, by concentrating antigens, antigen-presenting cells and antigen-responsive cells in lymph nodes (LNs). Beyond housing these cell types in one location, LNs are highly organized structures consisting of pre-positioned cells within well-defined microanatomical niches. In this Cell Science at a Glance article and accompanying poster, we outline the key cellular populations and components of the LN microenvironment that are present at steady state and chronicle the dynamic changes in these elements following an immune response. This review highlights the LN as a staging ground for both innate and adaptive immune responses, while providing an elegant example of how structure informs function.


Subject(s)
Antigens , Lymph Nodes , Animals , Immunity
19.
Nat Microbiol ; 4(12): 2552-2564, 2019 12.
Article in English | MEDLINE | ID: mdl-31659299

ABSTRACT

Innate immunity is the first line of host defence against pathogens. Suppression of innate immune responses is essential for the survival of all viruses. However, the interplay between innate immunity and HIV/SIV is only poorly characterized. We have discovered Vpx as a novel inhibitor of innate immune activation that associates with STING signalosomes and interferes with the nuclear translocation of NF-κB and the induction of innate immune genes. This new function of Vpx could be separated from its role in mediating degradation of the antiviral factor SAMHD1, and is conserved among diverse HIV-2/SIV Vpx. Vpx selectively suppressed cGAS-STING-mediated nuclear factor-κB signalling. Furthermore, Vpx and Vpr had complementary activities against cGAS-STING activity. Since SIVMAC lacking both Vpx and Vpr was less pathogenic than SIV deficient for Vpr or Vpx alone, suppression of innate immunity by HIV/SIV is probably a key pathogenic determinant, making it a promising target for intervention.


Subject(s)
HIV-2/metabolism , Membrane Proteins/metabolism , NF-kappa B/metabolism , Nucleotidyltransferases/metabolism , Signal Transduction , Simian Immunodeficiency Virus/metabolism , Viral Regulatory and Accessory Proteins/metabolism , Adult , Amino Acid Sequence , Animals , Disease Models, Animal , Female , HEK293 Cells , HIV Infections/immunology , HIV Infections/virology , HIV-2/genetics , HeLa Cells , Humans , Immunity, Innate/genetics , Male , Mice, Inbred BALB C , SAM Domain and HD Domain-Containing Protein 1/metabolism , Simian Acquired Immunodeficiency Syndrome/immunology , Simian Acquired Immunodeficiency Syndrome/virology , Simian Immunodeficiency Virus/genetics , Viral Regulatory and Accessory Proteins/genetics , Viral Regulatory and Accessory Proteins/immunology , Young Adult , vpr Gene Products, Human Immunodeficiency Virus/immunology , vpr Gene Products, Human Immunodeficiency Virus/metabolism
20.
Br J Pharmacol ; 176(16): 2962-2976, 2019 08.
Article in English | MEDLINE | ID: mdl-31166615

ABSTRACT

BACKGROUND AND PURPOSE: Hepatic mitochondrial pyruvate carrier (MPC) transports pyruvate into mitochondria. This study investigated the involvement of MPC1 in hepatic glucagon response, in order to identify a possible pharmacological intervention. EXPERIMENTAL APPROACH: The correlation between hepatic glucagon response and MPC1 induction was investigated in fasted mice and primary hepatocytes. The effects of ginsenoside Rb1 on MPC1 function were observed. KEY RESULTS: Glucagon challenge raised blood glucose with hepatic MPC1 induction, and inhibition of MPC induction coincided with a reduced rise in blood glucose. cAMP-responsive element-binding protein (CREB) knockdown blocked glucagon-induced MPC1 expression, while CREB overexpression increased MPC1 expression. Luciferase reporter, chromatin immunoprecipitation assay, and promoter mutation confirmed that CREB increased MPC1 transcription through gene promoter induction. CREB regulated transcription co-activator 2 nuclear translocation was also required for CREB to promote MPC1 induction. Glucagon shifted mitochondrial pyruvate towards carboxylation for gluconeogenesis via the opposite regulation of pyruvate dehydrogenase and carboxylase with respect to MPC1 induction. MPC1 induction was necessary for glucagon to promote pyruvate-driven hepatic glucose production (HGP), but glucagon failed to influence HGP from other gluconeogenic substrates routed into the tricarboxylic acid cycle, independent of MPC. Rb1 blocked cAMP signalling by inhibiting AC activity and deactivated CREB by dephosphorylation, possibly contributing to inhibiting MPC1 induction to reduce HGP. CONCLUSIONS AND IMPLICATIONS: CREB transcriptionally up-regulates MPC1 to provide pyruvate for gluconeogenesis. Rb1 reduced cAMP formation which consequently reduced CREB-mediated MPC1 induction and thereby might contribute to limiting pyruvate-dependent HGP. These results suggest a therapeutic strategy to reduce hyperglycaemia in diabetes.


Subject(s)
Anion Transport Proteins/metabolism , Cyclic AMP Response Element-Binding Protein/metabolism , Ginsenosides/pharmacology , Glucagon/metabolism , Gluconeogenesis/drug effects , Liver/drug effects , Mitochondrial Membrane Transport Proteins/metabolism , Monocarboxylic Acid Transporters/metabolism , Animals , Cells, Cultured , Glucose/metabolism , Hep G2 Cells , Hepatocytes/drug effects , Hepatocytes/metabolism , Humans , Liver/metabolism , Male , Mice, Inbred C57BL , Pyruvic Acid/metabolism , Up-Regulation/drug effects
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