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1.
Am J Hum Genet ; 79(4): 702-9, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16960806

ABSTRACT

Genetic analysis of a large Indian family with an autosomal dominant cataract phenotype allowed us to identify a novel cataract gene, CRYBA4. After a genomewide screen, linkage analysis identified a maximum LOD score of 3.20 (recombination fraction [theta] 0.001) with marker D22S1167 of the beta -crystallin gene cluster on chromosome 22. To date, CRYBA4 was the only gene in this cluster not associated with either human or murine cataracts. A pathogenic mutation was identified in exon 4 that segregated with the disease status. The c.317T-->C sequence change is predicted to replace the highly conserved hydrophobic amino acid phenylalanine94 with the hydrophilic amino acid serine. Modeling suggests that this substitution would significantly reduce the intrinsic stability of the crystalline monomer, which would impair its ability to form the association modes critical for lens transparency. Considering that CRYBA4 associates with CRYBB2 and that the latter protein has been implicated in microphthalmia, mutational analysis of CRYBA4 was performed in 32 patients affected with microphthalmia (small eye). We identified a c.242T-->C (Leu69Pro) sequence change in exon 4 in one patient, which is predicted here to disrupt the beta -sheet structure in CRYBA4. Protein folding would consequently be impaired, most probably leading to a structure with reduced stability in the mutant. This is the first report linking mutations in CRYBA4 to cataractogenesis and microphthalmia.


Subject(s)
Cataract/genetics , Microphthalmos/genetics , beta-Crystallin A Chain/genetics , Adult , Amino Acid Sequence , Amino Acid Substitution , Exons , Family , Female , Genes, Dominant , Genome, Human , Humans , Lod Score , Male , Microsatellite Repeats , Models, Molecular , Pedigree , Protein Structure, Secondary , Sequence Alignment , beta-Crystallin A Chain/chemistry
2.
Invest Ophthalmol Vis Sci ; 45(10): 3599-607, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15452067

ABSTRACT

PURPOSE: To study some functional candidate genes in cataract families of Indian descent. METHODS: Nine Indian families, clinically documented to have congenital/childhood cataracts, were screened for mutations in candidate genes such as CRYG (A-->D), CRYBB2, and GJA8 by PCR analyses and sequencing. Genomic DNA samples of either probands or any representative affected member of each family were PCR amplified and sequenced commercially. Documentation of single nucleotide polymorphisms (SNPs) and candidate mutations was done through BLAST SEARCH (http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?). RESULTS: Several single nucleotide polymorphisms in CRYG, CRYBB2, and GJA8 genes were observed. Because they do not co-segregate with the phenotype, they were excluded as candidates for the cataract formation in these patients. However, a substitution (W151C in exon 6 of CRYBB2) was identified as the most likely causative mutation underlying the phenotype of central nuclear cataract in all affected members of family C176. Protein structural interpretations demonstrated that no major structural alterations could be predicted and that even the hydrogen bonds to the neighboring Leu166 were unchanged. Surprisingly, hydropathy analysis of the mutant betaB2-crystallin featuring the amino acids at position 147 to 155, further increased the hydrophobicity, which might impair the solubility of the mutant protein. Finally, the Cys residue at position 151 might possibly be involved in intramolecular disulphide bridges with other cysteines during translation, possibly leading to dramatic structural changes. CONCLUSIONS: Exon 6 of CRYBB2 appears to be a critical region susceptible for mutations leading to lens opacity.


Subject(s)
Cataract/congenital , Cataract/genetics , Exons/genetics , Mutation , Polymorphism, Single Nucleotide/genetics , beta-Crystallin B Chain/genetics , Adolescent , Alleles , Amino Acid Sequence , Base Sequence , Child , Child, Preschool , DNA Mutational Analysis , Female , Genes, Dominant , Genes, Recessive , Humans , India , Male , Models, Molecular , Molecular Sequence Data , Pedigree , Polymerase Chain Reaction , Prospective Studies
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