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1.
PLoS Comput Biol ; 16(2): e1007672, 2020 02.
Article in English | MEDLINE | ID: mdl-32101537

ABSTRACT

Glioblastomas are aggressive primary brain tumors known for their inter- and intratumor heterogeneity. This disease is uniformly fatal, with intratumor heterogeneity the major reason for treatment failure and recurrence. Just like the nature vs nurture debate, heterogeneity can arise from intrinsic or environmental influences. Whilst it is impossible to clinically separate observed behavior of cells from their environmental context, using a mathematical framework combined with multiscale data gives us insight into the relative roles of variation from different sources. To better understand the implications of intratumor heterogeneity on therapeutic outcomes, we created a hybrid agent-based mathematical model that captures both the overall tumor kinetics and the individual cellular behavior. We track single cells as agents, cell density on a coarser scale, and growth factor diffusion and dynamics on a finer scale over time and space. Our model parameters were fit utilizing serial MRI imaging and cell tracking data from ex vivo tissue slices acquired from a growth-factor driven glioblastoma murine model. When fitting our model to serial imaging only, there was a spectrum of equally-good parameter fits corresponding to a wide range of phenotypic behaviors. When fitting our model using imaging and cell scale data, we determined that environmental heterogeneity alone is insufficient to match the single cell data, and intrinsic heterogeneity is required to fully capture the migration behavior. The wide spectrum of in silico tumors also had a wide variety of responses to an application of an anti-proliferative treatment. Recurrent tumors were generally less proliferative than pre-treatment tumors as measured via the model simulations and validated from human GBM patient histology. Further, we found that all tumors continued to grow with an anti-migratory treatment alone, but the anti-proliferative/anti-migratory combination generally showed improvement over an anti-proliferative treatment alone. Together our results emphasize the need to better understand the underlying phenotypes and tumor heterogeneity present in a tumor when designing therapeutic regimens.


Subject(s)
Brain Neoplasms/diagnostic imaging , Brain Neoplasms/physiopathology , Glioblastoma/diagnostic imaging , Glioblastoma/physiopathology , Magnetic Resonance Imaging , Animals , Cell Proliferation , Computational Biology , Computer Simulation , Humans , Kinetics , Male , Mice, Inbred NOD , Models, Theoretical , Phenotype , Rats , Rats, Sprague-Dawley
2.
Am J Clin Oncol ; 42(8): 655-661, 2019 08.
Article in English | MEDLINE | ID: mdl-31343422

ABSTRACT

Although glioblastoma (GBM) is a fatal primary brain cancer with short median survival of 15 months, a small number of patients survive >5 years after diagnosis; they are known as extreme survivors (ES). Because of their rarity, very little is known about what differentiates these outliers from other patients with GBM. For the purpose of identifying unknown drivers of extreme survivorship in GBM, the ENDURES consortium (ENvironmental Dynamics Underlying Responsive Extreme Survivors of GBM) was developed. This consortium is a multicenter collaborative network of investigators focused on the integration of multiple types of clinical data and the creation of patient-specific models of tumor growth informed by radiographic and histologic parameters. Leveraging our combined resources, the goals of the ENDURES consortium are 2-fold: (1) to build a curated, searchable, multilayered repository housing clinical and outcome data on a large cohort of ES patients with GBM; and (2) to leverage the ENDURES repository for new insights into tumor behavior and novel targets for prolonging survival for all patients with GBM. In this article, the authors review the available literature and discuss what is already known about ES. The authors then describe the creation of their consortium and some preliminary results.


Subject(s)
Brain Neoplasms/therapy , Glioblastoma/therapy , Registries , Aged , Brain Neoplasms/pathology , Female , Glioblastoma/pathology , Humans , Information Management , Interdisciplinary Communication , Intersectoral Collaboration , Male , Middle Aged , Registries/standards , Survival Rate
3.
Mol Biol Cell ; 23(4): 533-42, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22219380

ABSTRACT

Anaplastic gliomas, the most common and malignant of primary brain tumors, frequently contain activating mutations and amplifications in promigratory signal transduction pathways. However, targeting these pathways with individual signal transduction inhibitors does not appreciably reduce tumor invasion, because these pathways are redundant; blockade of any one pathway can be overcome by stimulation of another. This implies that a more effective approach would be to target a component at which these pathways converge. In this study, we have investigated whether the molecular motor myosin II represents such a target by examining glioma invasion in a series of increasingly complex models that are sensitive to platelet-derived growth factor, epidermal growth factor, or both. Our results lead to two conclusions. First, malignant glioma cells are stimulated to invade brain through the activation of multiple signaling cascades not accounted for in simple in vitro assays. Second, even though there is a high degree of redundancy in promigratory signaling cascades in gliomas, blocking tumor invasion by directly targeting myosin II remains effective. Our results thus support our hypothesis that myosin II represents a point of convergence for signal transduction pathways that drive glioma invasion and that its inhibition cannot be overcome by other motility mechanisms.


Subject(s)
Brain Neoplasms/pathology , Cell Movement/physiology , Glioma/pathology , Nonmuscle Myosin Type IIA/antagonists & inhibitors , Animals , Brain Neoplasms/metabolism , Cell Line, Tumor , Cell Movement/drug effects , Epidermal Growth Factor/pharmacology , ErbB Receptors/agonists , ErbB Receptors/genetics , ErbB Receptors/metabolism , Glioma/metabolism , Humans , Neoplasm Invasiveness , Nonmuscle Myosin Type IIA/metabolism , Phosphorylation , Platelet-Derived Growth Factor/pharmacology , Rats , Rats, Sprague-Dawley , Signal Transduction/drug effects
4.
Stem Cells ; 29(12): 2005-17, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21948688

ABSTRACT

Although new neurons are produced in the subventricular zone (SVZ) of the adult mammalian brain, fewer functional neurons are produced with increasing age. The age-related decline in neurogenesis has been attributed to a decreased pool of neural progenitor cells (NPCs), an increased rate of cell death, and an inability to undergo neuronal differentiation and develop functional synapses. The time between mitotic events has also been hypothesized to increase with age, but this has not been directly investigated. Studying primary-cultured NPCs from the young adult and aged mouse forebrain, we observe that fewer aged cells are dividing at a given time; however, the mitotic cells in aged cultures divide more frequently than mitotic cells in young cultures during a 48-hour period of live-cell time-lapse imaging. Double-thymidine-analog labeling also demonstrates that fewer aged cells are dividing at a given time, but those that do divide are significantly more likely to re-enter the cell cycle within a day, both in vitro and in vivo. Meanwhile, we observed that cellular survival is impaired in aged cultures. Using our live-cell imaging data, we developed a mathematical model describing cell cycle kinetics to predict the growth curves of cells over time in vitro and the labeling index over time in vivo. Together, these data surprisingly suggest that progenitor cells remaining in the aged SVZ are highly proliferative.


Subject(s)
Aging/physiology , Cell Cycle , Cellular Senescence , Neurogenesis , Prosencephalon/cytology , Animals , Cell Differentiation , Cell Proliferation , Cell Survival , Female , Immunohistochemistry , Mice , Mice, Inbred C57BL , Mitosis , Mitotic Index , Models, Neurological , Neural Stem Cells/cytology , Neural Stem Cells/physiology , Primary Cell Culture , Prosencephalon/physiology , Staining and Labeling , Time Factors , Time-Lapse Imaging
5.
Biol Blood Marrow Transplant ; 15(4): 416-20, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19285628

ABSTRACT

Consensus guidelines recommend various screening examinations for survivors after allogeneic hematopoietic cell transplantation (HCT), but how often these examinations detect abnormal findings is unknown. We reviewed the medical records of 118 patients who received comprehensive, standardized evaluations at 1 year after allogeneic HCT at Fred Hutchinson Cancer Research Center/Seattle Cancer Care Alliance. Abnormal findings were common, including moderate to severe pulmonary dysfunction (16%), fasting hyperlipidemia (56%), osteopenia (52%), osteoporosis (6%), and active chronic graft-versus-host disease (cGVHD) (64%). Recurrent malignancy (4%) and cGVHD (29%) were detected in previously unsuspected cases. Only 3% of patients had no abnormal findings. We conclude that comprehensive evaluation at 1 year after allogeneic HCT detects a high prevalence of medical problems. Longer follow-up is needed to determine whether early detection and intervention affect later morbidity and mortality.


Subject(s)
Graft vs Host Disease/mortality , Hematopoietic Stem Cell Transplantation , Hyperlipidemias/mortality , Lung Diseases/mortality , Osteoporosis/mortality , Adult , Fasting , Female , Follow-Up Studies , Graft vs Host Disease/pathology , Guidelines as Topic , Humans , Hyperlipidemias/pathology , Lung Diseases/etiology , Lung Diseases/pathology , Male , Osteoporosis/pathology , Prevalence , Time Factors , Transplantation, Homologous
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