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1.
J Mol Biol ; 434(5): 167459, 2022 03 15.
Article in English | MEDLINE | ID: mdl-35065991

ABSTRACT

Many integral membrane proteins are produced by translocon-associated ribosomes. The assembly of ribosomes translating membrane proteins on the translocons is mediated by a conserved system, composed of the signal recognition particle and its receptor (FtsY in Escherichia coli). FtsY is a peripheral membrane protein, and its role late during membrane protein targeting involves interactions with the translocon. However, earlier stages in the pathway have remained obscure, namely, how FtsY targets the membrane in vivo and where it initially docks. Our previous studies have demonstrated co-translational membrane-targeting of FtsY translation intermediates and identified a nascent FtsY targeting-peptide. Here, in a set of in vivo experiments, we utilized tightly stalled FtsY translation intermediates, pull-down assays and site-directed cross-linking, which revealed FtsY-nascent chain-associated proteins in the cytosol and on the membrane. Our results demonstrate interactions between the FtsY-translating ribosomes and cytosolic chaperones, which are followed by directly docking on the translocon. In support of this conclusion, we show that translocon over-expression increases dramatically the amount of membrane associated FtsY-translating ribosomes. The co-translational contacts of the FtsY nascent chains with the translocon differ from its post-translational contacts, suggesting a major structural maturation process. The identified interactions led us to propose a model for how FtsY may target the membrane co-translationally. On top of our past observations, the current results may add another tier to the hypothesis that FtsY acts stoichiometrically in targeting ribosomes to the membrane in a constitutive manner.


Subject(s)
Bacterial Proteins , Cell Membrane , Escherichia coli Proteins , Molecular Chaperones , Receptors, Cytoplasmic and Nuclear , Ribosomes , Signal Recognition Particle , Bacterial Proteins/biosynthesis , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Cell Membrane/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Escherichia coli Proteins/biosynthesis , Escherichia coli Proteins/chemistry , Escherichia coli Proteins/genetics , Molecular Chaperones/metabolism , Protein Binding , Protein Biosynthesis , Receptors, Cytoplasmic and Nuclear/biosynthesis , Receptors, Cytoplasmic and Nuclear/chemistry , Receptors, Cytoplasmic and Nuclear/genetics , Ribosomes/metabolism , Signal Recognition Particle/biosynthesis , Signal Recognition Particle/chemistry , Signal Recognition Particle/genetics
2.
Biomolecules ; 11(8)2021 08 12.
Article in English | MEDLINE | ID: mdl-34439861

ABSTRACT

BceF is a bacterial tyrosine kinase (BY-kinase) from Burkholderia cepacia, a Gram-negative bacterium accountable for respiratory infections in immunocompromised and cystic fibrosis patients. BceF is involved in the production of exopolysaccharides secreted to the biofilm matrix and promotes resistant and aggressive infections. BY-kinases share no homology with mammalian kinases, and thereby offer a means to develop novel and specific antivirulence drugs. Here, we report the crystal structure of the BceF kinase domain at 1.85 Å resolution. The isolated BceF kinase domain is assembled as a dimer in solution and crystallized as a dimer in the asymmetric unit with endogenous adenosine-diphosphate bound at the active sites. The low enzymatic efficiency measured in solution may be explained by the partial obstruction of the active sites at the crystallographic dimer interface. This study provides insights into self-assembly and the specific activity of isolated catalytic domains. Several unique variations around the active site compared to other BY-kinases may allow for structure-based design of specific inhibitors to target Burkholderia cepacia virulence.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/physiology , Biofilms/growth & development , Burkholderia cepacia/physiology , Protein-Tyrosine Kinases/chemistry , Protein-Tyrosine Kinases/physiology , Crystallography, X-Ray/methods , Humans , Protein Structure, Secondary , Protein Structure, Tertiary , Virulence/physiology
3.
Cogn Behav Neurol ; 19(1): 34-40, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16633017

ABSTRACT

Research in neural plasticity of adult cortical representations brought hope of significant potential for further improvement in therapy after cerebrovascular stroke, but the same processes involved in plasticity also allow for maladaptive changes whether spontaneous or caused by inappropriate therapeutic manipulations. Within the extensive network of multiple and bilateral motor cortical and subcortical areas, this paper focuses on the primary motor cortex. We review selected data from humans and primates regarding its functional anatomy and the mechanisms of adaptive neuroplasticity in the presence of brain insults, and the impact of motor skill learning in normals and rehabilitation therapy in patients. The discussion centers on the potential impact of the mechanisms of motor cortex neuroplasticity, especially of the phenomenon of competition among primary motor cortical representations, on the rehabilitation of paretic hand and shoulder after stroke. Application of results from neurophysiology and functional brain imaging research into the clinical practice is in the initial stages and remains a challenge for the future. Nevertheless, even the available research provides an important message for clinical rehabilitation of stroke patients: the need to widen multimodal and interdisciplinary approaches to rehabilitation of the paretic hand.


Subject(s)
Hand/physiopathology , Motor Cortex/physiopathology , Neuronal Plasticity , Paresis/rehabilitation , Stroke Rehabilitation , Brain Damage, Chronic/etiology , Brain Damage, Chronic/physiopathology , Brain Damage, Chronic/rehabilitation , Electric Stimulation Therapy/methods , Exercise Therapy/methods , Functional Laterality , Humans , Motor Skills , Neural Pathways/physiopathology , Occupational Therapy/methods , Paresis/etiology , Paresis/physiopathology , Recovery of Function , Stroke/complications , Stroke/physiopathology
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