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1.
Mol Ecol Resour ; 13(3): 546-9, 2013 May.
Article in English | MEDLINE | ID: mdl-23521844

ABSTRACT

This article documents the addition of 268 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Alburnoides bipunctatus, Chamaerops humilis, Chlidonias hybrida, Cyperus papyrus, Fusarium graminearum, Loxigilla barbadensis, Macrobrachium rosenbergii, Odontesthes bonariensis, Pelteobagrus vachelli, Posidonia oceanica, Potamotrygon motoro, Rhamdia quelen, Sarotherodon melanotheron heudelotii, Sibiraea angustata, Takifugu rubripes, Tarentola mauritanica, Trimmatostroma sp. and Wallago attu. These loci were cross-tested on the following species: Alburnoides fasciatus, Alburnoides kubanicus, Alburnoides maculatus, Alburnoides ohridanus, Alburnoides prespensis, Alburnoides rossicus, Alburnoides strymonicus, Alburnoides thessalicus, Alburnoides tzanevi, Carassius carassius, Fusarium asiaticum, Leucaspius delineatus, Loxigilla noctis dominica, Pelecus cultratus, Phoenix canariensis, Potamotrygon falkneri, Trachycarpus fortune and Vimba vimba.


Subject(s)
Databases, Genetic/statistics & numerical data , Microsatellite Repeats/genetics , DNA Primers/genetics , Species Specificity
2.
J Fish Biol ; 80(7): 2643-6, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22650440

ABSTRACT

Two to 14 alleles were found to be segregating per locus (mean 5·2), with observed and expected heterozygosities ranging from 0·08 to 0·78 and 0·08 to 0·94, respectively. Cross-amplification of six of these microsatellite loci indicated that they are also polymorphic in three species of Carcharhiniformes and two species of Lamniformes. The newly developed primers reported here constitute a useful tool for genetic population analyses on Prionace glauca and, potentially, other related species.


Subject(s)
Microsatellite Repeats/genetics , Sharks/genetics , Alleles , Animals , Molecular Sequence Data , Polymorphism, Genetic , Species Specificity
3.
Mol Ecol Resour ; 10(1): 197-9, 2010 Jan.
Article in English | MEDLINE | ID: mdl-21565010

ABSTRACT

Rhinobatos percellens, Rhinobatos horkelli and Zapteryx brevirostris, known as guitarfish, are commonly found inshore and caught by trawl nets. Recently, these species have been suffering sharp population declines. One of the main impediments to the development of conservation plans is the lack of information related to each species catch. Gathering this information is made more difficult by the fishermen's practice of removing parts of the animals before landing, as well as the morphological similarities among the three species. To address these issues, this work presents multiplex-PCR protocols that were developed to distinguish among these species using their genetic characteristics.

4.
Mol Ecol Resour ; 9(3): 771-3, 2009 May.
Article in English | MEDLINE | ID: mdl-21564740

ABSTRACT

Rhizoprionodon lalandii and R. porosus are widely distributed along the Atlantic coast of the Americas, living close to coastal areas and therefore frequently captured by seaboard fisheries. However, morphological identification of species in this genus is very difficult, especially when sharks have their heads and fins removed, making information about fishing, trading, and the evaluation of fishery effects on species conservation very difficult. This study's main objective is to develop molecular tools to identify these species using multiplex polymerase chain reaction (PCR) and PCR-restriction fragment length polymorphism techniques. Both techniques result in good low-cost markers and may be very useful in future studies about the exploitation of these species.

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