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1.
Sci Rep ; 12(1): 18981, 2022 11 08.
Article in English | MEDLINE | ID: mdl-36347900

ABSTRACT

We compared the outcomes of robotic-assisted partial nephrectomy (RPN) and open partial nephrectomy (OPN) using contemporary data to respond to unmet clinical needs. Data from patients included in the registry who underwent partial nephrectomy between January 01, 2014 and June 30, 2017 within 20 centres of the French Network for Research on Kidney Cancer UroCCR were collected (NCT03293563). Statistical methods included adjusted multivariable analyses. Rates of peri- and post-operative transfusion, and of surgical revision, were lower in the RPN (n = 1434) than the OPN (n = 571) group (2.9% vs. 6.0%, p = 0.0012; 3.8% vs. 11.5%, p < 0.0001; 2.4% vs. 6.7%, p < 0.0001, respectively). In multivariable analyses, RPN was independently associated with fewer early post-operative complications than OPN (overall: odds-ratio [95% confidence interval, CI] = 0.48 [0.35-0.66]; severe: 0.29 [0.16-0.54], p < 0.0001 for both) and shorter hospital stays (34% [30%; 37%], p < 0.0001). RPN was also a significantly associated with a decresedrisk of post-operative acute renal failure, and new-onset chronic kidney disease at 3 and 12 months post-surgery. There were no between-group differences in oncological outcomes. In comparison with OPN, RPN was associated with improved peri- and post-operative morbidity, better functional outcomes, and shorter hospital stays. Our results support the use of RPN, even for large and complex tumours.


Subject(s)
Kidney Neoplasms , Robotic Surgical Procedures , Humans , Kidney Neoplasms/surgery , Kidney Neoplasms/pathology , Nephrectomy/adverse effects , Nephrectomy/methods , Retrospective Studies , Robotic Surgical Procedures/adverse effects , Robotic Surgical Procedures/methods , Treatment Outcome
2.
Prog Urol ; 32(3): 182-188, 2022 Mar.
Article in French | MEDLINE | ID: mdl-34627668

ABSTRACT

INTRODUCTION: Urolift implant placement may be preferred to conventional endoscopic surgery for patients who wish to preserve their sexuality or for those who prefer a rapid post-operative recovery. The absence of general anaesthesia is an important element that reinforces the minimally invasive aspect of the procedure and improves the speed of recovery. The aim of this work was to report our preliminary experience of Urolift treatment under local anaesthesia. MATERIALS AND METHODS: A retrospective analysis was conducted including all patients treated with Urolift between 2017 and 2021 in our centre. Local anaesthesia was based on the instillation of 2 Xylocaine gels at 4°C into the urethra 15minutes before the procedure. The primary endpoint was the successful completion of the procedure without interruption due to pain or the need for any other form of anaesthesia or analgesia. RESULTS: Twenty-seven patients were included with a median age of 65 years and a prostate volume of 46mL. The International Prostate Symptom Score (IPSS) was 23. The first 3 patients were operated on under general anaesthesia. Local anaesthesia was introduced from the fourth patient onwards. There was no recourse to other modalities of analgesia or anaesthesia or interruption of the procedure. The operating time was 10minutes and pain was assessed at 1 on a visual analogue scale. At 3 months, the IPSS score was 9 (P=0.001). CONCLUSION: This preliminary experience confirms the feasibility of placing the Urolift implant under local anaesthesia without any failure of the proposed management. The improvement in IPSS score was consistent with previously published clinical trials. LEVEL OF EVIDENCE: 3.


Subject(s)
Lower Urinary Tract Symptoms , Prostatic Hyperplasia , Aged , Anesthesia, Local , Humans , Lower Urinary Tract Symptoms/diagnosis , Male , Prostate/surgery , Prostatic Hyperplasia/surgery , Quality of Life , Retrospective Studies , Treatment Outcome , Urethra/surgery
3.
Sci Rep ; 11(1): 17210, 2021 08 26.
Article in English | MEDLINE | ID: mdl-34446781

ABSTRACT

Integral Membrane Protein 2 B (ITM2B) is a type II ubiquitous transmembrane protein which role remains unclear. ITM2B mutations have been associated with different disorders: mutations leading to longer mutant proteins have been reported in two distinct Alzheimer-like autosomal dominant disorders with early-onset progressive dementia and cerebellar ataxia. Both disorders share neurological features including severe cerebral amyloid angiopathy, non-neuritic plaques, and fibrillary tangles as in Alzheimer disease. Our group reported a missense mutation in ITM2B, in an unusual retinal dystrophy with no dementia. This finding suggests a specific role of ITM2B in the retina. As the identification of retinal-specific ITM2B partners could bring new insights into the cellular functions of ITM2B, we performed quantitative proteomics of ITM2B interactome of the human retina. Overall, 457 ITM2B partners were identified with 8 of them involved in visual transduction. In addition, bulk Gene Ontology analyses showed that many ITM2B partners are involved in several other biological functions, such as microtubule organization, protein translation and interestingly, mitochondrial homeostasis. These data represent the first report of the ITM2B interactome in the human retina and may serve as a valuable inventory of new potential ITM2B partners for future investigations of ITM2B physiological functions and dysfunctions.


Subject(s)
Adaptor Proteins, Signal Transducing/metabolism , Carrier Proteins/metabolism , Proteome/metabolism , Proteomics/methods , Retina/metabolism , Adaptor Proteins, Signal Transducing/genetics , Aged, 80 and over , Amyloid beta-Peptides/metabolism , Cerebellar Ataxia/genetics , Dementia/genetics , Female , Genetic Predisposition to Disease/genetics , HEK293 Cells , Humans , Male , Mutation , Protein Binding , Sequence Analysis, DNA/methods
4.
Prog Urol ; 31(12): 755-761, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34154958

ABSTRACT

PURPOSE: The emergence of new communication media such as digital contents are progressively replacing more traditional medias in the field of educational programs. Our purpose was to assess urologist in training aspirations regarding urological education. METHODS: Members of a national urologist in training association were sent an anonymous online questionnaire regarding their medical formation in the field of urology. Responders interest for urological sub-specialty or education support (new tools and traditional support) were evaluated through a 5-point Likert scale. RESULTS: Overall, 109 young urologists (26%) responded to the survey. Most of the respondents worked during their training in an academic hospital (n=89, 82%). The three favorite tools for training chosen by the responders were: videos, workshop or masterclass, and podcasts (responders very interested were respectively n=64 (58.7%), n=50 (45.9%), and n=49 (45%)). E-mail newsletters were reported as the less useful educational tool by participants (n=38, 34.9%). Participants were very interested in improving their surgical skills and their radiological knowledge. Responders who were the most attracted by PCa were much more looking to improve their systemic treatment and radiological knowledges. CONCLUSIONS: Urologic-oncology was a priority regarding education for urologists in training. A majority of participants expressed a lack in their surgical education, revealing a reduced OR access and underlining utilization of new tools such as simulation. New digital contents such as social media or podcast achieved high interest for the participants, instead of more traditional media. There is a need that educational content evolve and uses new digital media. LEVEL OF EVIDENCE: 3.


Subject(s)
Internship and Residency , Urology , Humans , Internet , Surveys and Questionnaires , Urologists , Urology/education
5.
Prog Urol ; 31(12): 762-771, 2021 Oct.
Article in French | MEDLINE | ID: mdl-34154961

ABSTRACT

INTRODUCTION: Over the past few years, 3D printing has evolved rapidly. This has resulted in an increasing number of scientific publications reporting on the medical use of 3D printing. These applications can range from patient information, preoperative planning, education, or 3D printing of patient-specific surgical implants. The objective of this review was to give an overview of the different applications in urology and other disciplines based on a selection of publications. METHODS: In the current narrative review the Medline database was searched to identify all the related reports discussing the use of 3D printing in the medical field and more specifically in Urology. 3D printing applications were categorized so they could be searched more thoroughly within the Medline database. RESULTS: Three-dimensional printing can help improve pre-operative patient information, anatomy and medical trainee education. The 3D printed models may assist the surgeon in preoperative planning or become patient-specific surgical simulation models. In urology, kidney cancer surgery is the most concerned by 3D printing-related publications, for preoperative planning, but also for surgical simulation and surgical training. CONCLUSION: 3D printing has already proven useful in many medical applications, including urology, for patient information, education, pre-operative planning and surgical simulation. All areas of urology are involved and represented in the literature. Larger randomized controlled studies will certainly allow 3D printing to benefit patients in routine clinical practice.


Subject(s)
Kidney Neoplasms , Urology , Humans , Kidney , Models, Anatomic , Printing, Three-Dimensional
6.
Prog Urol ; 31(10): 618-626, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34158220

ABSTRACT

INTRODUCTION: The objective was to evaluate, by self-questionnaire, the feeling of participants in surgical training sessions on a live porcine model. METHODS: A computerized questionnaire (GoogleForm ©) was sent to the members of the French Association of Urologists-in-Training (AFUF) (fellows and residents). Only questionnaires from Urologists-in-training who had participated in surgical training sessions were included. The sessions consisted of performing surgeries such as laparoscopic nephrectomies or laparoscopic cystectomies. RESULTS: Overall, 198 met the inclusion criteria. A total of 36.4% (72/198) of the participants were fellows and 63.6% (126/198) were residents. According to the participants, the main interest of sessions was to be able to train for emergency situations. A total of 79.8% (158/198) of the participants wanted surgical simulation to become compulsory. To their opinion, the main advantage of surgical simulation on a live porcine model was: technical progress in 87.4% (173/198) of cases. A total of 13.1% (26/198) of the participants found it was unethical to perform the first technical procedures on live animal models. A total of 65.7% (130/198) of the participants considered that there is currently no system of substitution. CONCLUSION: For the participants, surgical training on a live porcine model allows technical progress while training for serious emergency situations. Surgeons and patients could benefit from this risk-free mock surgical scenario. LEVEL OF EVIDENCE: 3.


Subject(s)
Internship and Residency , Laparoscopy , Animals , Clinical Competence , Computer Simulation , Humans , Swine , Urologists
7.
Prog Urol ; 30(15): 970-975, 2020 Nov.
Article in French | MEDLINE | ID: mdl-33012631

ABSTRACT

Partial nephrectomy is a first-line treatment option for the management of renal tumors. It is a surgical procedure whose complexity and stakes vary according to the specific anatomy of the patient and his tumor. 3D modeling and 3D printing have become a means of representing and thus visualizing the tumor lesion and its anatomical relationships within the organ. This mode of visualization allows the surgeon and his team, but also the patient, to easily realize the tumor complexity, the predictable difficulty of the surgery and therefore the risks of complications. Various publications have reported the benefit to the patient in terms of pre-therapy education. Some have shown a benefit for the operator in terms of surgical planning. Finally, studies on preoperative surgical simulation showed shorter kidney lumpectomy times and less bleeding when surgeons were able to train before the operation on the corresponding 3D printed model. 3D printing therefore represents an innovative tool that would improve patient management prior to partial nephrectomy, through the information it can deliver, but also through surgical simulation.


Subject(s)
Kidney Neoplasms/surgery , Models, Anatomic , Nephrectomy/methods , Patient-Specific Modeling , Printing, Three-Dimensional , Humans
8.
Prog Urol ; 30(8-9): 448-455, 2020.
Article in English | MEDLINE | ID: mdl-32376208

ABSTRACT

INTRODUCTION: The COVID-19 outbreak in France is disturbing our health system. Urologists in training who are already known to have burnout, are in the front line to face this disease. The aim of our study was to assess the psychological impact of COVID-19 pandemic on young French urologists in training. MATERIAL AND METHODS: A self-administered anonymous questionnaire evaluating the pandemic added stress, and its negative impact on work and training quality, was e-mailed to the members of the French Association of Urologists in Training (AFUF). The association includes all French junior and senior residents. The survey lasted 3 days. Multivariable analyses using logistic regression was performed to identify the predictive factors. RESULTS: Two hundred and seventy-five (55.5%) of the 495 AFUF members responded to the questionnaire. More than 90% of responders felt more stressed by the pandemic. Fellows and senior residents were more likely to feel that the crisis had an important impact on their work quality (OR=1.76, IC95=[1.01-3.13]), even more when COVID 19 patients were present in their department (OR=2.31, IC95=[1.20-4.65]). Past medical history of respiratory disease (OR=2.57, IC95=[1.31-5.98]) and taking in charge COVID19 patients (OR=1.85, IC95=[0.98-3.59]) were additional risk factors. CONCLUSION: COVID19 pandemic has a negative impact on young French urologists in training and on their work and training quality. Managing their psychosocial well-being during this time is as important as managing their physical health. LEVEL OF EVIDENCE: 3.


Subject(s)
Anxiety/epidemiology , Coronavirus Infections/epidemiology , Pneumonia, Viral/epidemiology , Urologists/psychology , Urology/education , Adult , COVID-19 , Female , France/epidemiology , Humans , Internship and Residency , Male , Medical Staff, Hospital/psychology , Pandemics , Risk Factors , Surveys and Questionnaires
9.
AJR Am J Roentgenol ; 213(3): 626-631, 2019 09.
Article in English | MEDLINE | ID: mdl-31063426

ABSTRACT

OBJECTIVE. Three-dimensional printing is being used for surgical assistance, particularly for robot-assisted partial nephrectomy (RAPN). The objective of this study was to assess the anatomic accuracy of the 3D model used for 3D model-guided RAPN. SUBJECTS AND METHODS. The study included patients who underwent RAPN aided by 3D printing and anonymized CT. The model, based on preoperative CT with specialized software and a 3D printer, included vascular, urinary, parenchymal, and tumoral elements. It was then scanned. The major axis of the kidney and tumor and the volume of the tumor were measured blindly on the preoperative CT scan and the CT scan of the 3D model. Three comparative measurements between arterial branches were performed for each patient. The correlation of the arterial distribution between the scanner and the 3D model was evaluated on a Likert scale. RESULTS. A total of 16 patients were included between December 2017 and March 2018. The median tumor size was 4.7 cm (interquartile range [IQR], 3.9-6.5 cm). Between the initial CT scan and the 3D printed kidney, the major renal axis varied a median of 1.8% (IQR, 0.8-4.23%), major tumor axis varied 2.35% (IQR, 0.45-8.6%), and the tumor volume varied 14.7% (IQR, 11.5-25.2%). The median arterial interbranch measurement (three measurements performed on each kidney) was 1.8% (IQR, 1-3.25%). Fourteen of 16 (87.5%) 3D printed models had a score of 4 or higher by two readers and were considered valid. CONCLUSION. Three-dimensional printed models are accurate with respect to anatomic reality. The reliability of surgical assistance with 3D printed models must be evaluated.


Subject(s)
Kidney Neoplasms/surgery , Models, Anatomic , Nephrectomy , Printing, Three-Dimensional , Robotic Surgical Procedures , Aged , Female , Humans , Male , Middle Aged , Surgery, Computer-Assisted , Tomography, X-Ray Computed
10.
Clin Genet ; 92(1): 109-111, 2017 Jul.
Article in English | MEDLINE | ID: mdl-27790702

ABSTRACT

We report a novel ARL2BP splice site mutation after whole-exome sequencing (WES) applied to a Moroccan family including two sisters affected with autosomal recessive rod-cone dystrophy (arRCD). Subsequent analysis of 844 index cases did not reveal further pathogenic chances in ARL2BP indicating that mutations in ARL2B are a rare cause of arRCD (about 0.1%) in a large cohort of French patients.


Subject(s)
Carrier Proteins/genetics , Protein Isoforms/genetics , RNA Splicing/genetics , Retinitis Pigmentosa/genetics , Cohort Studies , Female , Humans , Male , Mutation , Pedigree , Retinitis Pigmentosa/physiopathology , Transcription Factors , Exome Sequencing
11.
Talanta ; 160: 761-767, 2016 Nov 01.
Article in English | MEDLINE | ID: mdl-27591673

ABSTRACT

Hydrophobins are one of the most active surface active proteins in nature, with an amphiphilic nature and the ability to self-assembly in elastic monolayers, the possible applications in industry are continuously increasing. However, production and purification of these proteins still remains a tedious process. We introduce here the use of polydopamine as imprinter polymer to create specific magnetic nanoparticles for the recognition of Hydrophobin HFBII from Trichoderma reesei. The protein was molecularly imprinted to magnetic nanoparticles to facilitate its specific detection and purification from liquids or carbonated beverages in the presence of other proteins. The resulting magnetic nanoparticles were successfully imprinted adsorbing till 77,4µg of HFBII hydrophobin per miligram of nanoparticles. The adsorption capacity of the imprinted nanoparticles was also tested for specificity using a mixture of five different proteins and peptides. A slight cross interaction was observed when proteins of similar molecular weight to HFBII were used. With larger proteins and peptides the interaction was very low. with other class II Hydrophobins the interaction was very similar as to HFBII.


Subject(s)
Fungal Proteins/chemistry , Indoles/chemistry , Magnetite Nanoparticles/chemistry , Polymers/chemistry , Trichoderma , Adsorption , Angiotensin II/chemistry , Aprotinin/chemistry , Carrier Proteins/chemistry , Insulin/chemistry , Lactoglobulins/chemistry , Molecular Imprinting , Serum Albumin, Bovine/chemistry
12.
J Appl Microbiol ; 120(5): 1302-12, 2016 May.
Article in English | MEDLINE | ID: mdl-26913473

ABSTRACT

AIMS: During a previous study concerning brown shrimp (Crangon crangon), selective streptomycin thallous acetate actidione (STAA) agar was used to determine the growth of Brochothrix thermosphacta. However, the growth of Vagococcus salmoninarum on this medium was also noticed. This study explores the spoilage potential of this organism when inoculated on sterile shrimp. METHODS AND RESULTS: Isolates growing on STAA were identified using (GTG)5 clustering followed by partial 16S rRNA gene sequence analysis. Their biochemical spoilage potential was analysed for H2 S production and enzymatic activities were tested using an APIZYM test. Headspace solid phase micro-extraction (SPME) and gas chromatography-mass spectrometry (GC-MS) were used to analyse the volatile organic compounds (VOCs) produced during storage of inoculated shrimp. CONCLUSION: Fifty-five per cent of isolates taken from STAA could be identified as V. salmoninarum, while no apparent morphological difference with B. thermosphacta isolates was identified upon the prescribed incubation conditions. For isolates identified as V. salmoninarum, production of 2-heptanone, 2-nonanone, 2-undecanone was found, as was the possibility to form H2 S. SIGNIFICANCE AND IMPACT OF THE STUDY: When using the STAA medium for detecting B. thermosphacta, one should consider the possible abundant presence of V. salmoninarum as well. Based on this study, V. salmoninarum does not exhibit great spoilage potential, although it can produce H2 S and formed VOCs which are also found in other spoiled seafood products.


Subject(s)
Enterococcaceae/metabolism , Food Packaging , Penaeidae/microbiology , Seafood/microbiology , Agar , Animals , Brochothrix/growth & development , Brochothrix/isolation & purification , Brochothrix/metabolism , Cycloheximide , Enterococcaceae/growth & development , Enterococcaceae/isolation & purification , Food Contamination/analysis , Gas Chromatography-Mass Spectrometry , Ketones/metabolism , Organometallic Compounds , RNA, Ribosomal, 16S/chemistry , Shellfish , Streptomycin , Volatile Organic Compounds/analysis , Volatile Organic Compounds/metabolism
13.
Clin Genet ; 89(6): 690-9, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26822852

ABSTRACT

Congenital stationary night blindness (CSNB) is a clinically and genetically heterogeneous retinal disorder which represents rod photoreceptor dysfunction or signal transmission defect from photoreceptors to adjacent bipolar cells. Patients displaying photoreceptor dysfunction show a Riggs-electroretinogram (ERG) while patients with a signal transmission defect show a Schubert-Bornschein ERG. The latter group is subdivided into complete or incomplete (ic) CSNB. Only few CSNB cases with Riggs-ERG and only one family with a disease-causing variant in SLC24A1 have been reported. Whole-exome sequencing (WES) in a previously diagnosed icCSNB patient identified a homozygous nonsense variant in SLC24A1. Indeed, re-investigation of the clinical data corrected the diagnosis to Riggs-form of CSNB. Targeted next-generation sequencing (NGS) identified compound heterozygous deletions and a homozygous missense variant in SLC24A1 in two other patients, respectively. ERG abnormalities varied in these three cases but all patients had normal visual acuity, no myopia or nystagmus, unlike in Schubert-Bornschein-type of CSNB. This confirms that SLC24A1 defects lead to CSNB and outlines phenotype/genotype correlations in CSNB subtypes. In case of unclear clinical characteristics, NGS techniques are helpful to clarify the diagnosis.


Subject(s)
Eye Diseases, Hereditary/genetics , Genes, Recessive , Genetic Diseases, X-Linked/genetics , Genetic Predisposition to Disease/genetics , High-Throughput Nucleotide Sequencing/methods , Mutation , Myopia/genetics , Night Blindness/genetics , Sodium-Calcium Exchanger/genetics , Amino Acid Sequence , Base Sequence , Electroretinography , Exome/genetics , Eye Diseases, Hereditary/diagnosis , Eye Diseases, Hereditary/physiopathology , Family Health , Female , Genetic Diseases, X-Linked/diagnosis , Genetic Diseases, X-Linked/physiopathology , Homozygote , Humans , Male , Myopia/diagnosis , Myopia/physiopathology , Night Blindness/diagnosis , Night Blindness/physiopathology , Pedigree , Sequence Homology, Amino Acid
16.
Comput Math Methods Med ; 2015: 284360, 2015.
Article in English | MEDLINE | ID: mdl-26136812

ABSTRACT

Radioimmunotherapy has shown that the use of monoclonal antibodies combined with a radioisotope like (131)I or (90)Y still remains ineffective for solid and radioresistant tumour treatment. Previous simulations have revealed that an increase in the number of (90)Y labelled to each antibody or nanoobject could be a solution to improve treatment output. It now seems important to assess the treatment output and toxicity when radionuclides such as (90)Y, (177)Lu, (131)I, (124)I, and (188)Re are used. Tumour control probability (TCP) and normal tissue complication probability (NTCP) curves versus the number of radionuclides per nanoobject were computed with MCNPX to evaluate treatment efficacy for solid tumours and to predict the incidence of surrounding side effects. Analyses were carried out for two solid tumour sizes of 0.5 and 1.0 cm radius and for nanoobject (i.e., a radiolabelled antibody) distributed uniformly or nonuniformly throughout a solid tumour (e.g., Non-small-cell-lung cancer (NSCLC)). (90)Y and (188)Re are the best candidates for solid tumour treatment when only one radionuclide is coupled to one carrier. Furthermore, regardless of the radionuclide properties, high values of TCP can be reached without toxicity if the number of radionuclides per nanoobject increases.


Subject(s)
Neoplasms/immunology , Neoplasms/radiotherapy , Radioimmunotherapy/instrumentation , Radioimmunotherapy/methods , Radioisotopes/therapeutic use , Algorithms , Antibodies, Monoclonal/therapeutic use , Carcinoma, Non-Small-Cell Lung/radiotherapy , Computer Simulation , Humans , Iodine Radioisotopes/therapeutic use , Lung/radiation effects , Lung Neoplasms/radiotherapy , Lutetium/therapeutic use , Models, Statistical , Monte Carlo Method , Nanomedicine/methods , Radiation Pneumonitis/diagnosis , Radiotherapy Planning, Computer-Assisted/methods , Rhenium/therapeutic use , Yttrium Radioisotopes/therapeutic use
17.
Prog Urol ; 25(6): 318-24, 2015 May.
Article in French | MEDLINE | ID: mdl-25775971

ABSTRACT

INTRODUCTION: The University Hospital of Dijon has selected sterilization for some of its flexible endoscopes. The decision came as part of an acquisition of a low-temperature sterilizer. The objective is to compare the actual cost of reprocessing a heat-sensitive ureteroscope by sterilization to a high-level disinfection (HLD) in semi-automatic bench. MATERIAL AND METHODS: From June 1 to December 31, 2013, the ureteroscope has been exclusively reprocessed by low-temperature sterilization (LTS). In parallel, the theorical number of peracetic acid disinfection that should have been made was simulated. An observational study of actual costs by micro-costing technique allowed us to determine the set of resources consumed by each of these strategies. Specific costs of sterilization were from the billing terms provided with the central sterile services department. RESULTS: During the 7 months of study, the ureteroscope was used and sterilized 11 times. Thirty-two chemical disinfection procedures would have been necessary. Comparing these two strategies, a cost difference is highlighted for the LTS with a real economy of 43.8% compared with HLD (1154.77 € versus 649.40 €). CONCLUSION: All in all, this micro-economic study confirms and strengthens our previous decision for selecting LTS for heat-sensitive ureteroscopes. On top of better micro-economic outcomes, it also provides benefits in theoretical risk analysis of transmission of infection.


Subject(s)
Sterilization/economics , Sterilization/methods , Ureteroscopes/economics , Costs and Cost Analysis , Disinfection , Equipment Design , Equipment Reuse/economics , France , Hospitals, University
18.
J Crohns Colitis ; 9(3): 252-8, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25588386

ABSTRACT

BACKGROUND AND AIMS: Long-term benefits of combination therapy (combotherapy) with infliximab (IFX) and azathioprine (AZA) have been less studied in ulcerative colitis (UC) than in Crohn's disease. The aim of the present study was to determine UC disease activity in patients who received at least 6 months of combotherapy, and whether cotreatment for more than 6 months was useful in these patients. METHODS: A retrospective multicenter study was conducted in seven French academic centers from January 2010 to September 2012, including all UC patients having received at least 6 months of combotherapy in prolonged remission off steroids. During the follow-up period, which was divided into trimesters, scheduled IFX was continued as maintenance and AZA could be withdrawn. Assessment of UC activity by trimester was based on the following events: disease relapse defined by clinical relapse requiring a change of treatment, IFX failure, and colectomy. RESULTS: Eighty-two patients were included (mean age 38 years; male:female ratio 1:1) and followed up for a median of 22.3±14.0 months. Comparing 393 trimesters of combotherapy with 282 trimesters of IFX alone, fewer clinical relapses were observed with combotherapy (p = 0.049). Similar results were observed for IFX failure (p = 0.048). No difference was observed for colectomy. Duration of combotherapy longer than 9 months was inversely associated with clinical relapse (hazard ratio = 0.32 [95% confidence interval 0.15-0.70]). CONCLUSIONS: UC patients treated with combotherapy should maintain IFX and AZA for at least 9 months. Further studies are required to determine the optimal duration of combotherapy before stopping AZA in this situation.


Subject(s)
Azathioprine/administration & dosage , Colitis, Ulcerative/drug therapy , Immunosuppressive Agents/administration & dosage , Infliximab/administration & dosage , Adult , Azathioprine/therapeutic use , Drug Administration Schedule , Drug Therapy, Combination , Female , Follow-Up Studies , France , Humans , Immunosuppressive Agents/therapeutic use , Induction Chemotherapy , Infliximab/therapeutic use , Kaplan-Meier Estimate , Maintenance Chemotherapy , Male , Middle Aged , Proportional Hazards Models , ROC Curve , Retrospective Studies , Treatment Outcome
19.
J Fish Dis ; 38(9): 795-807, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25073650

ABSTRACT

Vibrio anguillarum is the causative agent of vibriosis, a deadly haemorrhagic septicaemic disease affecting various marine and fresh/brackish water fish, bivalves and crustaceans. However, the diversity and virulence mechanisms of this pathogen are still insufficiently known. In this study, we aimed to increase our understanding of V. anguillarum diversity and virulence through comparative genome analysis of 15 V. anguillarum strains, obtained from different hosts or non-host niches and geographical regions, among which 10 and 5 strains were found to be virulent and avirulent, respectively, against sea bass larvae. First, the 15 draft genomes were annotated and screened for putative virulence factors, including genes encoding iron uptake systems, transport systems and non-ribosomal peptide synthetases. Second, comparative genome analysis was performed, focusing on single nucleotide polymorphisms (SNPs) and small insertions and deletions (InDels). Five V. anguillarum strains showed a remarkably high nucleotide identity. However, these strains comprise both virulent and avirulent strains towards sea bass larvae, suggesting that differences in virulence may be caused by subtle nucleotide variations. Clearly, the draft genome sequence of these 15 strains represents a starting point for further genetic research of this economically important fish pathogen.


Subject(s)
Genetic Variation , Genome, Bacterial/genetics , Vibrio/genetics , Vibrio/pathogenicity , Animals , Bass/microbiology , Gene Deletion , Mutagenesis, Insertional , Polymorphism, Single Nucleotide , Virulence/genetics
20.
Food Microbiol ; 45(Pt B): 222-30, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25500388

ABSTRACT

This study investigated the variation in growth/no growth boundaries of 188 Escherichia coli strains. Experiments were conducted in Luria-Bertani media under 36 combinations of lactic acid (LA) (0 and 25 mM), pH (3.8, 3.9, 4.0, 4.1, 4.2 and 4.3 for 0 mM LA and 4.3, 4.4, 4.5, 4.6, 4.7 and 4.8 for 25 mM LA) and temperature (20, 25 and 30 °C). After 3 days of incubation, growth was monitored through optical density measurements. For each strain, a so-called purposeful selection approach was used to fit a logistic regression model that adequately predicted the likelihood for growth. Further, to assess the growth/no growth variability for all the strains at once, a generalized linear mixed model was fitted to the data. Strain was fitted as a fixed factor and replicate as a random blocking factor. E. coli O157:H7 strain ATCC 43888 was used as reference strain allowing a comparison with the other strains. Out of the 188 strains tested, 140 strains (∼75%) presented a significantly higher probability of growth under low pH conditions than the O157:H7 strain ATCC 43888, whereas 20 strains (∼11%) showed a significantly lower probability of growth under high pH conditions.


Subject(s)
Escherichia coli O157/growth & development , Escherichia coli/growth & development , Colony Count, Microbial , Escherichia coli/chemistry , Escherichia coli/classification , Escherichia coli O157/chemistry , Hydrogen-Ion Concentration , Logistic Models , Models, Theoretical , Temperature
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