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1.
PLoS One ; 9(7): e101044, 2014.
Article in English | MEDLINE | ID: mdl-25019514

ABSTRACT

Oxidative stress is generated by reactive oxygen species (ROS) produced in response to metabolic activity and environmental factors. Increased oxidative stress is associated with the pathophysiology of a broad spectrum of inflammatory diseases. Cellular response to excess ROS involves the induction of antioxidant response element (ARE) genes under control of the transcriptional activator Nrf2 and the transcriptional repressor Bach1. The development of synthetic small molecules that activate the protective anti-oxidant response network is of major therapeutic interest. Traditional small molecules targeting ARE-regulated gene activation (e.g., bardoxolone, dimethyl fumarate) function by alkylating numerous proteins including Keap1, the controlling protein of Nrf2. An alternative is to target the repressor Bach1. Bach1 has an endogenous ligand, heme, that inhibits Bach1 binding to ARE, thus allowing Nrf2-mediated gene expression including that of heme-oxygenase-1 (HMOX1), a well described target of Bach1 repression. In this report, normal human lung fibroblasts were used to screen a collection of synthetic small molecules for their ability to induce HMOX1. A class of HMOX1-inducing compounds, represented by HPP-4382, was discovered. These compounds are not reactive electrophiles, are not suppressed by N-acetyl cysteine, and do not perturb either ROS or cellular glutathione. Using RNAi, we further demonstrate that HPP-4382 induces HMOX1 in an Nrf2-dependent manner. Chromatin immunoprecipitation verified that HPP-4382 treatment of NHLF cells reciprocally coordinated a decrease in binding of Bach1 and an increase of Nrf2 binding to the HMOX1 E2 enhancer. Finally we show that HPP-4382 can inhibit Bach1 activity in a reporter assay that measures transcription driven by the human HMOX1 E2 enhancer. Our results suggest that HPP-4382 is a novel activator of the antioxidant response through the modulation of Bach1 binding to the ARE binding site of target genes.


Subject(s)
Antioxidant Response Elements , Basic-Leucine Zipper Transcription Factors/antagonists & inhibitors , Basic-Leucine Zipper Transcription Factors/metabolism , Fanconi Anemia Complementation Group Proteins/antagonists & inhibitors , Fanconi Anemia Complementation Group Proteins/metabolism , Heme Oxygenase-1/genetics , Transcriptional Activation , Chromatin Immunoprecipitation , Fibroblasts/drug effects , Heme/metabolism , Heme Oxygenase-1/metabolism , Humans , Oxidative Stress
2.
BMC Neurol ; 14: 12, 2014 Jan 15.
Article in English | MEDLINE | ID: mdl-24423155

ABSTRACT

BACKGROUND: TTP488, an antagonist at the Receptor for Advanced Glycation End products, was evaluated as a potential treatment for patients with mild-to-moderate Alzheimer's disease (AD). A previous report describes decreased decline in ADAS-cog (delta = 3.1, p = 0.008 at 18 months, ANCOVA with multiple imputation), relative to placebo, following a 5 mg/day dose of TTP488. Acute, reversible cognitive worsening was seen with a 20 mg/day dose. The present study further evaluates the efficacy of TTP488 by subgroup analyses based on disease severity and concentration effect analysis. METHODS: 399 patients were randomized to one of two oral TTP488 doses (60 mg for 6 days followed by 20 mg/day; 15 mg for 6 days followed by 5 mg/day) or placebo for 18 months. Pre-specified primary analysis, using an ITT population, was on the ADAS-cog11. Secondary analyses included as a key secondary variable the Clinical Dementia Rating-Sum of Boxes (CDR-SB), and another secondary variable of the ADCS-ADL. RESULTS: On-treatment analysis demonstrated numerical differences favoring 5 mg/day over placebo, with nominal significance at Month 18 (delta = 2.7, p = 0.03). Patients with mild AD, whether defined by MMSE or ADAS-cog, demonstrated significant differences favoring 5 mg/day on ADAS-cog and trends on CDR-sb and ADCS-ADL at Month 18. TTP488 plasma concentrations of 7.6-16.8 ng/mL were associated with a decreased decline in ADAS-cog over time compared to placebo. Worsening on the ADAS-cog relative to placebo was evident at 46.8-167.0 ng/mL. CONCLUSIONS: Results of these analyses support further investigation of 5 mg/day in future Phase 3 trials in patients with mild AD.


Subject(s)
Alzheimer Disease/drug therapy , Neuroprotective Agents/therapeutic use , Receptor for Advanced Glycation End Products/antagonists & inhibitors , Aged , Antigens, Neoplasm , Double-Blind Method , Female , Humans , Male
3.
J Immunol ; 181(6): 4272-8, 2008 Sep 15.
Article in English | MEDLINE | ID: mdl-18768885

ABSTRACT

The pattern recognition receptor, RAGE, has been shown to be involved in adaptive immune responses but its role on the components of these responses is not well understood. We have studied the effects of a small molecule inhibitor of RAGE and the deletion of the receptor (RAGE-/- mice) on T cell responses involved in autoimmunity and allograft rejection. Syngeneic islet graft and islet allograft rejection was reduced in NOD and B6 mice treated with TTP488, a small molecule RAGE inhibitor (p < 0.001). RAGE-/- mice with streptozotocin-induced diabetes showed delayed rejection of islet allografts compared with wild type (WT) mice (p < 0.02). This response in vivo correlated with reduced proliferative responses of RAGE-/- T cells in MLRs and in WT T cells cultured with TTP488. Overall T cell proliferation following activation with anti-CD3 and anti-CD28 mAbs were similar in RAGE-/- and WT cells, but RAGE-/- T cells did not respond to costimulation with anti-CD28 mAb. Furthermore, culture supernatants from cultures with anti-CD3 and anti-CD28 mAbs showed higher levels of IL-10, IL-5, and TNF-alpha with RAGE-/- compared with WT T cells, and WT T cells showed reduced production of IFN-gamma in the presence of TTP488, suggesting that RAGE may be important in the differentiation of T cell subjects. Indeed, by real-time PCR, we found higher levels of RAGE mRNA expression on clonal T cells activated under Th1 differentiating conditions. We conclude that activation of RAGE on T cells is involved in early events that lead to differentiation of Th1(+) T cells.


Subject(s)
Cell Differentiation/immunology , Lymphocyte Activation/immunology , Receptors, Immunologic/metabolism , T-Lymphocyte Subsets/enzymology , T-Lymphocyte Subsets/immunology , Animals , Cell Differentiation/genetics , Cell Proliferation , Cells, Cultured , Diabetes Mellitus, Type 1/enzymology , Diabetes Mellitus, Type 1/genetics , Diabetes Mellitus, Type 1/immunology , Glycation End Products, Advanced/metabolism , Graft Survival/drug effects , Graft Survival/immunology , Islets of Langerhans Transplantation/immunology , Islets of Langerhans Transplantation/pathology , Ligands , Lymphocyte Activation/genetics , Lymphocyte Culture Test, Mixed , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Inbred NOD , Mice, Knockout , Mice, SCID , Mice, Transgenic , Receptor for Advanced Glycation End Products , Receptors, Immunologic/antagonists & inhibitors , Receptors, Immunologic/deficiency , Receptors, Immunologic/genetics , T-Lymphocyte Subsets/pathology , Th1 Cells/enzymology , Th1 Cells/immunology , Th1 Cells/pathology , Th2 Cells/enzymology , Th2 Cells/immunology , Th2 Cells/pathology
4.
Curr Drug Discov Technol ; 3(3): 189-97, 2006 Sep.
Article in English | MEDLINE | ID: mdl-17311564

ABSTRACT

Computer assisted, or in silico, drug discovery approaches play an important role in the search for small molecule hits and leads. These include structure- and ligand-based methods, as well as data mining and QSAR. They are used to analyze and predict ligand-receptor binding, as well as pharmacokinentic profiles of compounds with therapeutic potential. A diversity of offerings is publically/commercially available for performing these tasks. Each offering comprises select combinations of in silico methods. Efficient in silico drug discovery requires effective use of combinations of these tools. Unfortunately, no single vendor offering integrates all in silico capabilities. Typically, different vendors offer different "flavors" of the same method and specific "flavors" have associated strengths and weaknesses. Furthermore, significant inter-vendor format incompatibilities exist. Consequently, extensive scripting as well as manual intervention is required in order to overcome disparate data formats. In this article, we introduce the architecture and implementation of a highly efficient, and automated in silico drug discovery engine that integrates multi-vendor software. A single graphical user interface enables the user to 'Click & Configure' modeling tools and permits 'Mix & Matching' components from various vendors. It deploys a 'Divide & Conquer' strategy to marshal the resources of a multi-node compute cluster for compute-intensive tasks. This basic framework in performing in silico modeling activities (work-flow automation) envisions the integration of structure-based, ligand-based, and other modes of in silico drug discovery.


Subject(s)
Computer-Aided Design , Drug Design , Technology, Pharmaceutical/methods , Software , Structure-Activity Relationship , Technology, Pharmaceutical/instrumentation , User-Computer Interface
5.
J Virol ; 78(22): 12147-56, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15507601

ABSTRACT

By using a homology-based bioinformatics approach, a structural model of the vaccinia virus (VV) I7L proteinase was developed. A unique chemical library of approximately 51,000 compounds was computationally queried to identify potential active site inhibitors. The resulting biased subset of compounds was assayed for both toxicity and the ability to inhibit the growth of VV in tissue culture cells. A family of chemotypically related compounds was found which exhibits selective activity against orthopoxviruses, inhibiting VV with 50% inhibitory concentrations of 3 to 12 microM. These compounds exhibited no significant cytotoxicity in the four cell lines tested and did not inhibit the growth of other organisms such as Saccharomyces cerevisiae, Pseudomonas aeruginosa, adenovirus, or encephalomyocarditis virus. Phenotypic analyses of virus-infected cells were conducted in the presence of active compounds to verify that the correct biochemical step (I7L-mediated core protein processing) was being inhibited. Electron microscopy of compound-treated VV-infected cells indicated a block in morphogenesis. Compound-resistant viruses were generated and resistance was mapped to the I7L open reading frame. Transient expression with the mutant I7L gene rescued the ability of wild-type virus to replicate in the presence of compound, indicating that this is the only gene necessary for resistance. This novel class of inhibitors has potential for development as an efficient antiviral drug against pathogenic orthopoxviruses, including smallpox.


Subject(s)
Antiviral Agents/pharmacology , Orthopoxvirus/drug effects , Amino Acid Sequence , Drug Resistance, Viral , HeLa Cells , Humans , Molecular Sequence Data , Orthopoxvirus/physiology , Virus Replication/drug effects
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