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3.
Thromb Haemost ; 107(4): 642-7, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22274626

ABSTRACT

MicroRNAs have emerged as important post-transcriptional regulators of lipid metabolism, and represent a new class of targets for therapeutic intervention. Recently, microRNA-33a and b (miR-33a/b) were discovered as key regulators of metabolic programs including cholesterol and fatty acid homeostasis. These intronic microRNAs are embedded in the sterol response element binding protein genes, SREBF2 and SREBF1, which code for transcription factors that coordinate cholesterol and fatty acid synthesis. By repressing a variety of genes involved in cholesterol export and fatty acid oxidation, including ABCA1, CROT, CPT1, HADHB and PRKAA1, miR-33a/b act in concert with their host genes to boost cellular sterol levels. Recent work in animal models has shown that inhibition of these small non-coding RNAs has potent effects on lipoprotein metabolism, including increasing plasma high-density lipoprotein (HDL) and reducing very low density lipoprotein (VLDL) triglycerides. Furthermore, other microRNAs are being discovered that also target the ABCA1 pathway, including miR-758, suggesting that miRNAs may work cooperatively to regulate this pathway. These exciting findings support the development of microRNA antagonists as potential therapeutics for the treatment of dyslipidaemia, atherosclerosis and related metabolic diseases.


Subject(s)
Atherosclerosis/genetics , Gene Expression Regulation , Lipid Metabolism , MicroRNAs/genetics , Sterol Regulatory Element Binding Protein 1/genetics , Sterol Regulatory Element Binding Protein 2/genetics , ATP Binding Cassette Transporter 1 , ATP-Binding Cassette Transporters/biosynthesis , Animals , Cholesterol/metabolism , Disease Models, Animal , Fatty Acids/metabolism , Humans , Lipoproteins, HDL/metabolism , Lipoproteins, VLDL , Liver/metabolism , Mice , MicroRNAs/metabolism , Models, Biological , Triglycerides
4.
Bioresour Technol ; 98(16): 3106-11, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17222553

ABSTRACT

Kenaf is an annual fiber crop adaptable to a wide range of climates and soil types. This study investigated the use of kenaf core fiber as a feedstock for enzyme-enhanced fermentation. Triplicate kenaf core fiber samples were treated with enzymes having cellulase:hemicellulase activity ratios of 0:1, 0.015:1, 0.45:1, and 2.54:1 at a rate of 5010 IU/kg dry matter hemicellulase activity, vacuum-sealed, and incubated at 37 degrees C for 21 d. Samples were analyzed for pH, water soluble carbohydrates, organic acids, and hemicellulose and cellulose concentrations. All treatments produced a pH less than 4.0, which is sufficient for stable storage. Treatments with 2.54:1 and 0.45:1 produced the highest water soluble carbohydrate and lactic acid concentrations. Enzymes with no or low cellulase activity produced results similar to the control. Utilizing enzyme mixtures with high cellulase activity is an effective pretreatment method for ensiled kenaf core fiber.


Subject(s)
Fermentation , Hibiscus/chemistry , Carbohydrates/analysis , Carbohydrates/chemistry , Cellulase/chemistry , Cellulose/analysis , Glycoside Hydrolases/chemistry , Hydrogen-Ion Concentration , Polysaccharides/analysis , Solubility
5.
Theor Appl Genet ; 106(5): 866-74, 2003 Mar.
Article in English | MEDLINE | ID: mdl-12647061

ABSTRACT

Plant cell walls of forage provide a major source of energy for ruminant animals. Digestion of cell walls is limited by the presence of lignin, therefore the improving the digestibility of forages by reducing lignin content is a major goal in forage crop breeding programs. A recombinant inbred line maize population was used to map quantitative trait loci (QTL) for neutral detergent fiber (NDF), acid detergent fiber (ADF), and acid detergent lignin (ADL) of leaf-sheath and stalk tissues. All traits were positively genetically correlated. The larger genetic correlations were between NDF and ADF in sheaths (r = 0.84), NDF and ADF (r = 0.96), ADF and ADL (r = 0.83), and NDF and ADL (r = 0.76) in stalks. Twelve QTL were detected for NDF and 11 QTL for ADF in leaf-sheaths. Eight QTL detected for both traits were defined by the same or linked marker loci. Eight QTL were associated with leaf-sheath ADL. Eleven QTL were detected for NDF and ADF, and 12 QTL for ADL in stalks. Nine of eleven QTL detected for both NDF and ADF in stalks coincided in their genomic position. A high proportion of QTL detected for these traits had the same parental effects and genomic locations, suggesting that it is only necessary to select on one fiber component (NDF or ADF) to improve digestibility. Favorable correlated responses of unselected fiber components are expected due to coincident genomic locations of QTL and the high genetic correlation between fiber components. Several QTL detected in this study coincided in their positions with putative cellulose synthase genes from maize.


Subject(s)
Chromosome Mapping , Lignin/metabolism , Quantitative Trait Loci , Zea mays/genetics , Cell Wall/genetics , Cell Wall/metabolism , Lignin/genetics , Zea mays/metabolism
6.
Eur Respir J ; 20(3): 518-23, 2002 Sep.
Article in English | MEDLINE | ID: mdl-12358323

ABSTRACT

This study investigated whether patients developing pulmonary arterial hypertension (PAH) after exposure to the appetite suppressants fenfluramine and dexfenfluramine have mutations in the bone morphogenetic protein receptor 2 (BMPR2) gene, as reported in primary pulmonary hypertension. BMPR2 was examined for mutations in 33 unrelated patients with sporadic PAH, and in two sisters with PAH, all of whom had taken fenfluramine derivatives, as well as in 130 normal controls. The PAH patients also underwent cardiac catheterisation and body mass determinations. Three BMPR2 mutations predicting changes in the primary structure of the BMPR-II protein were found in three of the 33 unrelated patients (9%), and a fourth mutation was found in the two sisters. No BMPR2 mutations were identified in the 130 normal controls. This difference in frequency was statistically significant. Moreover, the mutation-positive patients had a somewhat shorter duration of fenfluramine exposure before illness than the mutation-negative patients, a difference that was statistically significant when the two sisters were included in the analysis. In conclusion, the present authors have detected bone morphogenetic protein receptor 2 mutations that appear to be rare in the general population but may combine with exposure to fenfluramine derivatives to greatly increase the risk of developing severe pulmonary arterial hypertension.


Subject(s)
Appetite Depressants/adverse effects , Dexfenfluramine/adverse effects , Fenfluramine/adverse effects , Germ-Line Mutation , Hypertension, Pulmonary/chemically induced , Hypertension, Pulmonary/genetics , Protein Serine-Threonine Kinases/genetics , Adolescent , Adult , Aged , Bone Morphogenetic Protein Receptors, Type II , Female , Humans , Male , Middle Aged , Risk Factors
7.
Crop Sci ; 42(1): 185-189, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11756271

ABSTRACT

Eastern gamagrass (Tripsacum dactyloides L.) is a warm-season, perennial grass with high palatability and productivity. However, poor stand establishment, often due to seed dormancy, limits its widespread use. Seed dormancy is often caused by structures surrounding the embryo, the physiological state of the embryo itself, or a combination of these factors. The eastern gamagrass dispersal unit is a floret within a thick, hard cupule. The objective of this study was to evaluate effects of cupule (including lemma and palea) removal and caryopsis scarification on germination of eastern gamagrass by means of different commercial seed lots produced in different locations and years. Germination tests were conducted at 20/30 degrees C alternating temperature with light during 30 degrees C for 8 h daily. Germination counts were made every 7 d. After 28 d, the germination of decupulated caryopses from different seed lots germinated from 16 to 49% across seed lots, compared with 5 to 18% germination for caryopses with cupule intact. Scarifying the pericarp over the embryo, however, resulted in germination of all dormant seeds. We conclude that while the cupule (including the lemma and palea) contributes to the dormancy of eastern gamagrass, the pericarp and/or testa are the main factors restricting germination of this species. In addition, caryopsis scarification increased the germination rate and the germination test could be shortened to 21 or even 14 d depending on the seed lot.

8.
J Biomol Screen ; 6(1): 29-37, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11679163

ABSTRACT

G Protein-coupled receptors (GPCRs) represent one of the most important target classes for drug discovery. Various assay formats are currently applied to screen large compound libraries for agonists or antagonists. However, the development of nonradioactive, miniaturizable assays that are compatible with the requirements of ultra-high throughput screening (uHTS) has so far been slow. In this report we describe homogeneous fluorescence-based binding assays that are highly amenable to miniaturization. Fluorescence intensity distribution analysis (FIDA) is a single-molecule detection method that is sensitive to brightness changes of individual particles, such as those induced by binding of fluorescent ligands to membrane particles with multiple receptor sites. As a confocal detection technology, FIDA inherently allows reduction of the assay volume to the microliter range and below without any loss of signal. Binding and displacement experiments are demonstrated for various types of GPCRs, such as chemokine, peptide hormone, or small-molecule ligand receptors, demonstrating the broad applicability of this method. The results correlate quantitatively with radioligand binding data. We compare FIDA with fluorescence anisotropy (FA), which is based on changes of molecular rotation rates upon binding of fluorescent ligands to membranes. While FA requires a higher degree of binding, FIDA is sensitive down to lower levels of receptor expression. Both methods are, within these boundary conditions, applicable to uHTS.


Subject(s)
Drug Evaluation, Preclinical/methods , GTP-Binding Proteins/metabolism , Receptors, Cell Surface/analysis , Drug Evaluation, Preclinical/statistics & numerical data , Fluorescence , Fluorescence Polarization , Ligands , Miniaturization , Radioligand Assay , Receptors, Cell Surface/metabolism , Sensitivity and Specificity
12.
Curr Opin Lipidol ; 12(5): 519-27, 2001 Oct.
Article in English | MEDLINE | ID: mdl-11561171

ABSTRACT

Peroxisome proliferator-activated receptor (PPAR)-gamma is a nuclear hormone receptor, with a well-established role in adipogenesis and glucose metabolism. Over the past 3 years several laboratories have reported that this protein can influence macrophage responses to a variety of inflammatory stimuli. The effect of PPAR-gamma activation on macrophage lipid uptake, cholesterol efflux, and cytokine production have all recently been examined in several in-vitro culture systems. In addition, PPAR-gamma ligands have been shown to influence atherosclerotic lesion formation in murine models of that disease. This review attempts to summarize and critically evaluate that work and its implications for the use of PPAR-gamma activators in understanding and treating the pathogenetic processes that contribute to atherosclerotic plaque formation.


Subject(s)
Inflammation/physiopathology , Lipid Metabolism , Macrophages/physiology , Receptors, Cytoplasmic and Nuclear/physiology , Transcription Factors/physiology , Animals , Arteriosclerosis/drug therapy , Arteriosclerosis/physiopathology , Cell Differentiation/drug effects , Cell Differentiation/physiology , Humans , Macrophages/cytology , Transcription Factors/pharmacology
13.
15.
Hum Mutat ; 18(2): 120-31, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11462236

ABSTRACT

Carboxypeptidase E (CPE) is involved in the biosynthesis of peptide hormones and neurotransmitters, including insulin. One of the features of type 2 diabetes mellitus (T2DM) is an elevation in the proinsulin level and/or proinsulin/insulin molar ratio, suggesting that mutations in proinsulin processing enzymes may contribute to the development of T2DM. We scanned CPE for mutations in a collection of Ashkenazi T2DM families and identified five novel single nucleotide polymorphisms (SNPs). An SNP in the 283(rd) codon, c.847C>T, changes arginine to tryptophan (R283W). The residue Arg283 is conserved among CPE orthologs as well as most enzymatically active metallocarboxypeptidases. Of the 272 Ashkenazi T2DM pedigrees screened, we found four families segregating R283W. Within these four families, patients who inherited one copy of this variant had much earlier age of onset for T2DM. The R283W CPE protein cleaves peptide substrates with substantially lower efficiencies and is less stable at elevated temperature. In addition, the R283W CPE variant has a narrower pH optimum and is much less active at pH 6.0-6.5, indicating that the R283W CPE variant would be substantially less active than wild type CPE in the trans-Golgi network and immature secretory vesicles where the enzyme functions in vivo. To summarize, we uncovered a rare non-conservative missense mutation in CPE and demonstrated that the mutant protein has altered enzymatic properties. We predict that this mutant could cause hyperproinsulinism and diabetes in the homozygous state.


Subject(s)
Carboxypeptidases/genetics , Carboxypeptidases/metabolism , Mutation, Missense/genetics , Polymorphism, Single Nucleotide/genetics , 5' Untranslated Regions/genetics , Amino Acid Sequence , Carboxypeptidase H , Carboxypeptidases/chemistry , Cell Line , Chromatography, High Pressure Liquid , DNA Mutational Analysis , Enzyme Stability , Exons/genetics , Female , Genetic Testing , Heterozygote , Humans , Hydrogen-Ion Concentration , Jews/genetics , Kinetics , Male , Molecular Sequence Data , Pedigree , Promoter Regions, Genetic/genetics , Sequence Alignment , Temperature , White People/genetics
16.
Pediatr Emerg Care ; 17(3): 220-5, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11437153

ABSTRACT

Emergency care of the pediatric sickle cell patient requires complex nursing care and interventions including patient assessment, pain management, infection control, and appropriate understanding of complex hematological and immunological issues. This article includes two case studies that will illustrate the pathophysiology of sickle cell disease in the context of the bedside emergency nursing of the pediatric patient.


Subject(s)
Anemia, Sickle Cell/nursing , Emergency Nursing/methods , Pediatric Nursing/methods , Adolescent , Child , Emergencies , Female , Humans , Infant , Infant, Newborn , Male , Nursing Assessment/methods , United States
17.
J Biol Chem ; 276(18): 15137-45, 2001 May 04.
Article in English | MEDLINE | ID: mdl-11328826

ABSTRACT

Mutations in the ATP-binding cassette transporter A1 (ABCA1) transporter are associated with Tangier disease and a defect in cellular cholesterol efflux. The amino terminus of the ABCA1 transporter has two putative in-frame translation initiation sites, 60 amino acids apart. A cluster of hydrophobic amino acids form a potentially cleavable signal sequence in this 60-residue extension. We investigated the functional role of this extension and found that it was required for stable protein expression of transporter constructs containing any downstream transmembrane domains. The extension directed transporter translocation across the ER membrane with an orientation that resulted in glycosylation of amino acids immediately distal to the signal sequence. Neither the native signal sequence nor a green fluorescent protein tag, fused at the amino terminus, was cleaved from ABCA1. The green fluorescent protein fusion protein had efflux activity comparable with wild type ABCA1 and demonstrated a predominantly plasma membrane distribution in transfected cells. These data establish a requirement for the upstream 60 amino acids of ABCA1. This region contains an uncleaved signal anchor sequence that positions the amino terminus in a type II orientation leading to the extracellular presentation of an approximately 600-amino acid loop in which loss-of-function mutations cluster in Tangier disease patients.


Subject(s)
ATP-Binding Cassette Transporters/metabolism , ATP-Binding Cassette Transporters/chemistry , ATP-Binding Cassette Transporters/genetics , ATP-Binding Cassette Transporters/immunology , Antibody Specificity , Cholesterol/metabolism , DNA, Complementary , Green Fluorescent Proteins , Luminescent Proteins/metabolism , Protein Biosynthesis , Recombinant Fusion Proteins/metabolism , Transfection
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