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1.
Molecules ; 27(14)2022 Jul 21.
Article in English | MEDLINE | ID: mdl-35889518

ABSTRACT

Apparent amylose content (AAC) is one of the most important parameters in rice quality evaluation. In this study, four rice reference materials used to test rice AAC were developed. The AAC of rice reference materials were measured by a spectrophotometric method with a defatting procedure, calibrated from potato amylose and waxy rice amylopectin at the absorption wavelengths of 620 and 720 nm. Homogeneity test (n = 20) was judged by F-test based on the mean squares of among and within bottles, and short- and long-term stability monitoring was performed by T-test to check if there was significant degradation at the delivery temperature of under 40 °C (14 days) and at 0-4 °C storage condition (18 months), respectively. After joint evaluation by ten laboratories, Dixion and Cochran statistical analyses were presented. The expanded uncertainties were calculated based on the uncertainty of homogeneity, short- and long-term stability, and inter-laboratory validation containing factor k = 2. It found that the four reference materials were homogenous and stable, and had the AAC (g/100 g, k = 2) of 2.96 ± 1.01, 10.68 ± 0.66, 17.18 ± 1.04, and 16.09 ± 1.29, respectively, at 620 nm, and 1.46 ± 0.49, 10.44 ± 0.56, 16.82 ± 0.75, and 24.33 ± 0.52, respectively, at 720 nm. It was indicated that 720 nm was more suitable for the determination of rice AAC with lower uncertainties. The determinations of the AAC of 11 rice varieties were carried out by two methods, the method without defatting and with calibration from the four rice reference materials and the method with a defatting procedure and calibrating from potato amylose and waxy rice amylopectin. It confirmed that the undefatted rice reference materials could achieve satisfactory results to test the rice samples with the AAC ranging from 1 to 25 g/100 g. It would greatly reduce the time cost and improve testing efficiency and applicability, and provide technical support for the high-quality development of the rice industry.


Subject(s)
Amylose , Oryza , Amylopectin , Amylose/analysis , Oryza/metabolism , Starch/metabolism , Temperature
2.
Pestic Biochem Physiol ; 179: 104970, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34802520

ABSTRACT

The widespread use of herbicides has raised considerable concern with regard to their harmful consequences on plant growth, crop yield and the soil ecological environment. It has been well documented that colonization of rhizobacteria in the plant root system has a positive effect on activation of plant defenses to protect the plant from damage. Using the platform of high-throughput analysis with tandem mass spectrometry and Illumina sequencing, we identified the specific activated rhizobacteria, the key growth stimulating substances and the metabolic pathways involved in seedling stage tolerance to mefenacet stress in rice. The relative abundance of beneficial rhizospheremicrobes such as Acidobacteria and Firmicutes increased with mefenacet treatment, indicating that the rhizosphere recruited some beneficial microbes to resist mefenacet stress. Mefenacet treatment induced alterations in several interlinked metabolic pathways, many of which were related to activation of defense response signaling, especially the indole-3-pyruvate pathway. Indole-3-acetaldehyde and indole-3-ethanol from this pathway may act as flexible storage pools for indole-3-acetic acid (IAA). Our findings also suggest that a significant increase of IAA produced by the enrichment of beneficial rhizospheremicrobes, for example genus Bacillus, alleviated the dwarfing phenomenon observed in hydroponic medium following mefenacet exposure, which may be a key signaling molecule primarily for phytostimulation and phytotolerance in microbe-plant interactions.


Subject(s)
Oryza , Rhizosphere , Acetanilides , Benzothiazoles , Plant Roots , Soil Microbiology
3.
Anal Bioanal Chem ; 412(22): 5435-5446, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32572545

ABSTRACT

Low-abundance proteins (LAPs) play a very important role in interaction, regulation, and metabolism of plant biological processes. A combinatorial peptide ligand library (CPLL) can solve the problem of high-abundance proteins (HAPs) masking LAPs and enlarging the dynamic range of protein concentrations perfectly and be considered as one of the most advanced approaches for plant proteomics research. In this paper, a proper CPLL method to rice leaf proteins was established for the first time and 1056 proteins were identified in rice leaf extracts, and 624 (59.1%) LAPs were newly detected after CPLL. Based on this technology, we detected the response of rice to Cd stress and analyzed the differential LAPs and the biological significance of misexpressed proteins before and after Cd stress by bioinformatics analysis. An important contribution has also been made to a better understanding of the complex mechanisms by which rice adapts to Cd stress. Graphical abstract.


Subject(s)
Cadmium/toxicity , Combinatorial Chemistry Techniques/methods , Oryza/metabolism , Peptide Library , Plant Leaves/metabolism , Plant Proteins/metabolism , Stress, Physiological/drug effects , Ligands , Limit of Detection , Oryza/drug effects
4.
Environ Pollut ; 262: 114145, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32142974

ABSTRACT

The widely used fungicide triadimefon (TDF) has been detected in aquatic environments, and appears to disrupt steroid homeostasis; however, the toxic effects on fish reproduction triggered by TDF via the key receptor signaling pathways remain largely unknown. The present study showed that TDF (0.069, 0.138, 0.690 mg/L) exposure not only caused disordered germ cell maturation, but also decreased spawned egg production. In order to better understand this reproductive inhibition, we investigated the effects of TDF based on quantitative PCR, Western blot and mass spectrometry methodology in zebrafish. Due to the preferential accumulation of TDF in the liver, a general pattern of up-regulation of genes involved in biotransformation pathway was observed. A significant increase in abcb4 expression appeared to be responsible for TDF excretion. TDF-induced receptors (AhR2 and PXR) changed many genes involved in steroid metabolism, and subsequent disruptions in steroid homeostasis, which might be the key biological pathway in TDF reproductive toxicity. However, due to the different metabolic demands, the transcript profiles involved in steroid metabolism in zebrafish exhibited a sex-specific expression pattern. For example, the increase in gene expression of ahr2 was accompanied by a reduction in the rate of E2 biosynthesis resulting from the diminished cyp19a1a expression, and in turn led to down-regulation of esr1 and vtg1 in the liver, supporting the anti-estrogenic effect of TDF in male fish. In contrast, the increase in E2 production was accompanied by an increase in Esr1 protein expression caused by TDF and paralleled the increase in ahrr1 expression, suggesting that TDF may induce estrogenic activity through AhR-ER interactions in females. In addition, over-induction of cyp3a65 activity mediated through pxr, which helped to accelerate the transformation from TDF to triadimenol in the liver, appeared to elevate T metabolite rate in females. The down-regulation of fshß transcript in males further suggested that TDF might adversely affect normal gametogenesis and induce reproductive toxicity.


Subject(s)
Water Pollutants, Chemical , Zebrafish Proteins , Animals , Biotransformation , Female , Male , Triazoles , Zebrafish
5.
J Agric Food Chem ; 67(17): 5026-5032, 2019 May 01.
Article in English | MEDLINE | ID: mdl-30933518

ABSTRACT

Allergen Glb33 is an important allergen in rice that can cause allergic reactions such as asthma and atopic dermatitis. However, knowledge of the content in rice is sparse. In the present work, an absolute protein quantification method was established for allergen Glb33 in rice samples using liquid chromatography-tandem mass spectrometry. After extraction of allergen Glb33 from rice grains using salt solution, the isotope-labeled peptide internal standard was added to the extract, followed by enzymatic digestion with trypsin. The signature peptide and its isotope-labeled analogue from the tryptic hydrolysates of allergen Glb33 and the internal standard were detected by liquid chromatography-tandem mass spectrometry. The quantitative bias caused by tryptic efficiency and matrix effect was corrected by using two isotope-labeled standard peptides. The method exhibited good linearity in the range of 1-200 nM, with coefficients of determination of R2 > 0.998. A high sensitivity was observed, with a limit of quantification of 0.97 nM. Mean recoveries obtained from different rice matrices ranged from 82.7%-98.1% with precision <8.5% in intraday trials ( n = 6), while mean recoveries were from 75.1%-107.4% with precision <14.6% in interday trials ( n = 14). The developed method was successfully applied to the analysis of allergen Glb33 in 24 different rice cultivars.


Subject(s)
Allergens/chemistry , Chromatography, Liquid/methods , Oryza/chemistry , Peptides/chemistry , Plant Proteins/chemistry , Tandem Mass Spectrometry/methods , Allergens/immunology , Carbon Isotopes/analysis , Isotope Labeling , Nitrogen Isotopes/analysis , Oryza/immunology , Peptides/immunology , Plant Proteins/immunology , Seeds/chemistry , Seeds/immunology
6.
J Sci Food Agric ; 99(10): 4602-4608, 2019 Aug 15.
Article in English | MEDLINE | ID: mdl-30891755

ABSTRACT

BACKGROUND: High levels of harmful pesticide residues in rice can cause undesirable side effects and are a source of great concern to consumers. Reduction of pesticide residues to provide rice security has thus became an urgent problem. RESULTS: In this study, the effects of commercial and home processing on removal of chlorpyrifos and carbosulfan residues from rice, and the formation of metabolites during processing, were studied. The results showed that 3,5,6-trichloro-2-pyridinol (0.87 mg kg-1 ) and carbofuran (0.43 mg kg-1 ) were the predominant components detected in paddy rice. All detected residues were primarily deposited on the rice hull and bran. Washing twice followed by high-pressure cooking was able to further decrease residues in polished rice with the processing factor value <0.25. Following application of pesticides at the recommended rate and twice the recommended rate, with a preharvest interval of 28 days, changes in residues from harvest to dining table based on efficient processing techniques were investigated. The final residues dropped to below maximum residue levels after washing twice followed by high-pressure cooking. CONCLUSION: This simple cooking process thus reduces the risk of dietary exposure, and it is recommended that it is adopted by all consumers. © 2019 Society of Chemical Industry.


Subject(s)
Cooking/methods , Oryza/chemistry , Pesticide Residues/chemistry , Carbamates/chemistry , Carbofuran/chemistry , Chlorpyrifos/chemistry , Food Contamination/analysis , Kinetics
7.
Rapid Commun Mass Spectrom ; 33(9): 867-874, 2019 May 15.
Article in English | MEDLINE | ID: mdl-30735598

ABSTRACT

RATIONALE: The presence of organotins in the environment affects food safety, making it important to monitor the levels of organotin pesticides (OTPs) in fruit and vegetable samples. METHODS: In the present study, a simple and low cost method for simultaneous determination of three OTPs (azocyclotin, fenbutatin oxide and triphenyltin hydroxide) in vegetable and fruit samples was developed and validated, based on solid-phase extraction and liquid chromatography/tandem mass spectrometry. RESULTS: Extraction with acetonitrile containing 0.2% formic acid positively affected the recoveries of the three OTPs. Moreover, the simultaneous purification of the three OTPs was the most efficient using mixed-mode cation-exchange cartridges and 5.0% ammonium hydroxide in methanol as eluent, and, in this case, mild matrix effects (-9.3% to 21.6%) were obtained for the three OTPs monitored. The developed method reached limits of quantification of 1 µg kg-1 , and linearity was satisfactory, with correlation coefficients >0.995. A fortification study showed that when spiked at 1.0-50.0 µg kg-1 the mean trueness values were from 72.3 to 110.0% in all matrices (three vegetables and three fruits). The intra-day precision was <14.1%, and the inter-day precision (n = 11) was <18.2%. CONCLUSIONS: The proposed method was successfully applied to the simultaneous analysis of three OTPs in vegetables and fruits.


Subject(s)
Chromatography, High Pressure Liquid/methods , Fruit/chemistry , Organotin Compounds/analysis , Pesticide Residues/analysis , Tandem Mass Spectrometry/methods , Vegetables/chemistry , Food Contamination/analysis , Limit of Detection , Organotin Compounds/isolation & purification , Pesticide Residues/isolation & purification , Solid Phase Extraction
8.
Se Pu ; 36(11): 1132-1139, 2018 Nov 01.
Article in Chinese | MEDLINE | ID: mdl-30378376

ABSTRACT

Ultrasound-assisted extraction coupled with liquid chromatography-tandem mass spectrometry (UAE-LC-MS/MS) was used to develop a trace multi-residue detection method for six novel acetolactate synthase (ALS) inhibitor herbicide residues (mesosulfuron-methyl, halosulfuron-methyl, bispyribac-sodium, pyriminobac-methyl, orthosulfamuron, and ethoxysulfuron) in oil crops. In this study, the recoveries of the six herbicides based on ultrasound-assisted and QuEChERS extraction methods were compared, and five adsorbent materials (C18, PSA, GCB, Florisil, and EMR) were optimized based on their purification and adsorption capacities. The results showed that the ultrasound-assisted extractions gave recoveries greater than 90% for the six compounds. Furthermore, EMR showed little adsorption for the six compounds and a reduced matrix effect by effective removal of the oil lipids. The six herbicide residues had good linearities in the concentrations ranging from 0.05 to 500.0 µg/L, and the correlation coefficients were greater than 0.9984. The limits of detection and limits of quantification for this method were 0.08-0.8 µg/kg and 0.25-2.5 µg/kg, respectively. The recoveries of the six pesticides at three spiked levels in four matrices (rapeseed, soybean, peanut, and sunflower seed) ranged from 70.7% to 103.8%, with relative standard deviations of 0.8%-9.2%. This method was successfully applied to the simultaneous determination of six ALS inhibitor herbicide residues in oil crops.


Subject(s)
Acetolactate Synthase/antagonists & inhibitors , Crops, Agricultural/chemistry , Pesticide Residues/analysis , Chromatography, Liquid , Herbicides , Sulfonylurea Compounds , Tandem Mass Spectrometry
9.
J Basic Microbiol ; 58(8): 670-678, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29897133

ABSTRACT

Ustilaginoidea (U.) virens grows on rice grains and leads to significant rice yield losses in most of the major rice producing areas. Meanwhile, ustiloxins produced by U. virens are a serious hazard to human health and ecological safety of farmlands. The other key point is that ustiloxins have been regarded as a novel resource with their potential in the treatment of cancers. There is no better way to extract ustiloxins than from pure culture of the high ustilotoxin-producing strains. U. virens has become a key research organism. However, due to the presence of some interference components, it is a certain difficulty in the successful isolation of the strain from the false smut balls. We present here a detailed study based on the separation, screening and identification of high ustiloxins-producing strains of U. virens. Through this study, we got a satisfactory success rate of separation and provided a good solution to the problem of separation. At the same time, this study provides quality resources for researchers interested in ustiloxins as anticancer agents.


Subject(s)
Hypocreales/isolation & purification , Mycotoxins/biosynthesis , Oryza , Plant Diseases/microbiology , Antineoplastic Agents/isolation & purification , Chromatography, Liquid , Culture Media , DNA, Fungal/genetics , DNA, Ribosomal Spacer/genetics , Hypocreales/genetics , Hypocreales/growth & development , Light , Mycotoxins/classification , Mycotoxins/isolation & purification , Sequence Analysis, DNA , Tandem Mass Spectrometry
10.
Food Chem ; 239: 733-741, 2018 Jan 15.
Article in English | MEDLINE | ID: mdl-28873629

ABSTRACT

Soluble-free, soluble-conjugated, insoluble-bound phenolics and antioxidant activity, flavonoid (TFC), proanthocyanidins (TPAC), anthocyanins and minerals of fifteen whole rice grains with different colors were investigated. Soluble-free protocatechuic and vanillic acids were only quantified in black rice, which had the most quantities. Non-pigmented rice had no detectable conjugated protocatechuic and 2,5-dihydroxybenzoic acids both of which were found in black and red rice, respectively. The main bound phenolic acids were ferulic and p-coumaric, as well as 2,5-dihydroxybenzoic in red rice and protocatechuic and vanillic acids in black rice. Soluble-conjugated phenolics, TFC, and anthocyanins were negatively correlated with L∗, b∗, C and H° values. TPAC was positively correlated with a∗ (P<0.01). Protocatechuic, vanillic, syringic and ferulic acids were associated with TPC and antioxidant activity in the soluble-conjugated fraction while protocatechuic and ferulic acid were correlated with those in the insoluble-bound fraction. Principal component analysis divided samples into non-pigmented, red and black rice groups.


Subject(s)
Oryza , Anthocyanins , Antioxidants , Hydroxybenzoates , Minerals , Phenols , Plant Extracts , Proanthocyanidins
11.
J Agric Food Chem ; 65(45): 9909-9915, 2017 Nov 15.
Article in English | MEDLINE | ID: mdl-29058434

ABSTRACT

Coconut contains many uncharacterized cytokinins that have important physiological effects in plants and humans. In this work, a method based on liquid chromatography-tandem mass spectrometry was developed for identification and quantification of six cytokinin nucleotide monophosphates in coconut flesh. Excellent separation was achieved using a low-coverage C18 bonded-phase column with an acidic mobile phase, which greatly improved the retention of target compounds. To enable high-throughput analysis, a single-step solid-phase extraction using mixed-mode anion-exchange cartridges was employed for sample preparation. This proved to be an effective method to minimize matrix effects and ensure high selectivity. The limits of detection varied from 0.06 to 0.3 ng/mL, and the limits of quantification ranged from 0.2 to 1.0 ng/mL. The linearity was statistically verified over 2 orders of magnitude, giving a coefficient of determination (R2) greater than 0.9981. The mean recoveries were from 81 to 108%; the intraday precision (n = 6) was less than 11%; and the interday precision (n = 11) was within 14%. The developed method was applied to the determination of cytokinin nucleotide monophosphates in coconut flesh samples, and four of them were successfully identified and quantified. The results showed that trans-zeatin riboside-5'-monophosphate was the dominant cytokinin, with a concentration of 2.7-34.2 ng/g, followed by N6-isopentenyladenosine-5'-monophosphate (≤12.9 ng/g), while the concentrations of cis-zeatin riboside-5'-monophosphate and dihydrozeatin riboside-5'-monophosphate were less than 2.2 and 4.9 ng/g, respectively.


Subject(s)
Chromatography, Reverse-Phase/methods , Cocos/chemistry , Cytokinins/chemistry , Fruit/chemistry , Nucleotides/chemistry , Plant Extracts/chemistry , Tandem Mass Spectrometry/methods , Chromatography, High Pressure Liquid/methods , Cytokinins/isolation & purification , Nucleotides/isolation & purification , Plant Extracts/isolation & purification , Solid Phase Extraction
12.
Plant Methods ; 13: 64, 2017.
Article in English | MEDLINE | ID: mdl-28785299

ABSTRACT

BACKGROUND: Plant glutathione S-transferases (GSTs, EC 2.5.1.18) are multifunctional enzymes involved in heavy metal cellular detoxification by conjugating the tripeptide (g-Glu-Cys-Gly) glutathione to heavy metals. Previous studies demonstrated that individual rice GSTs were differentially induced by heavy metal exposure at the mRNA transcript level. However, little information is available concerning changes in protein concentration of rice GSTs under heavy metal stress. Because the correlation between changes in protein concentration and gene expression under abiotic stress is poor, direct determination of rice GSTs protein concentrations during cadmium (Cd) exposure is a more effective and reliable approach to explore possible mechanisms of rice Cd translocation and accumulation. RESULTS: This study established an optimized and advanced liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based targeted proteomics assay for quantification of OsGSTF14 and OsGSTU6 proteins in Cd-stressed rice roots. The tryptic signature peptides were chosen as surrogate analytes and winged peptides containing the isotope-labeled signature peptides were used as the internal standards. The signature peptides exhibited good linearity in the range of 0.6-60 and 0.3-30 nM, respectively. The limit of detection and limit of quantification were 4.5 and 14.5 µg/g for OsGSTF14, respectively, and 2.1 and 7.0 µg/g for OsGSTU6. The spiking recoveries rates at low, medium and high levels were in the range of 72.5-93.4%, with intra- and inter-day precisions of 5.5-9.1 and 4.2-10.2%, respectively. CONCLUSIONS: The assay successfully quantified the temporal and dose responses of OsGSTF14 and OsGSTU6 proteins in Cd-stressed rice roots, with good accuracy, precision and high-throughput. This assay will have significant application in developing quantification methods of other proteins in Cd-stressed rice, which may provide more insight into the mechanisms of Cd translocation and accumulation in rice.

13.
Food Addit Contam Part B Surveill ; 10(1): 69-77, 2017 Mar.
Article in English | MEDLINE | ID: mdl-27782776

ABSTRACT

Nickel (Ni) concentrations in milled rice obtained from China and their variations among different provinces and varieties, as well as associated health risks, were investigated. Results showed that the mean Ni concentration in milled rice was 0.49 ± 0.51 mg/kg, which was much higher than reported in United Kingdom, French and Iranian cereals. There were significant variations (P < 0.05) of Ni concentrations in milled rice among different provinces and among varieties in the same province. According to the dietary risk assessment, the mean values of the target hazard quotient for chronic risk ranged from 1.24 to 1.46 for 2-4, 4-7 and 7-11-year-old children, and all values of margin of exposure for hypersensitivity risk were considerably below 10 for all age groups, indicating that the current dietary exposure to Ni in rice is of concern for 2-11-year-old children and Ni-sensitised individuals. It is essential to establish a continuous monitoring programme to control Ni contamination in rice.


Subject(s)
Diet , Edible Grain/chemistry , Environmental Exposure/analysis , Food Contamination/analysis , Food Supply/standards , Nickel/analysis , Oryza , Agriculture , Child , Child, Preschool , China , Environmental Exposure/adverse effects , Environmental Illness/etiology , Humans , Nickel/adverse effects , Risk Assessment , Soil Pollutants/adverse effects , Soil Pollutants/analysis
14.
J Chromatogr A ; 1476: 46-52, 2016 Dec 09.
Article in English | MEDLINE | ID: mdl-27865455

ABSTRACT

Ustiloxins are cyclopeptide mycotoxins produced by the pathogenic fungus Ustilaginoidea virens of rice false smut. Quantification of ustiloxins is essential to assess the food safety of rice infected by rice false smut disease. This paper describes a sensitive method for the simultaneous quantification of ustiloxins A, B, C, D and F in rice grains using liquid chromatography-tandem mass spectrometry (LC-MS/MS). Since notable matrix enhancement effects (21%-78%) occurred for all of the target analytes (except for ustiloxin A), several solid phase extraction materials were tested for their ability to retain ustiloxins from aqueous solutions prior to the LC-MS/MS analysis, including C18 sorbents, polymer anion exchange sorbents resin (PAX), and polymer cation exchange resin (PCX). The PCX resin was adopted due to its higher extraction capability and selectivity for all targets compared to others, and in this case, almost no matrix effects (-5% to 8%) were observed for all of the ustiloxins monitored. The developed method reached limits of quantification of 0.2-2ngg-1, and linearity was statistically verified over two orders of magnitude with regression coefficients (R2)>0.991. The mean recoveries were from 85% to 109%, and the inter-day precisions (n=11) were less than 16%, with intra-day precisions (n=6) within 12%. Analysis of samples showed that ustiloxin A was the dominant species, with the content ranging from 5.5 to 273.8ngg-1, followed by ustiloxin B (≤88.7ngg-1), while concentrations of ustiloxins C, D and F were slightly lower (≤43.2ngg-1). To our knowledge, this is the first report on the determination and analysis of five ustiloxins simultaneously in a single analysis.


Subject(s)
Cation Exchange Resins , Chromatography, High Pressure Liquid , Mycotoxins/analysis , Oryza/microbiology , Peptides, Cyclic/analysis , Solid Phase Extraction/methods , Tandem Mass Spectrometry , Hypocreales/chemistry , Mycotoxins/chemistry , Mycotoxins/isolation & purification , Peptides, Cyclic/chemistry , Peptides, Cyclic/isolation & purification , Polymers
15.
Rapid Commun Mass Spectrom ; 30(16): 1891-900, 2016 08 30.
Article in English | MEDLINE | ID: mdl-27426698

ABSTRACT

RATIONALE: The identification and quantification of phytochelatins (PCs) and their derivatives are important to understand their roles in plant growth and development. A method couplling high-performance liquid chromatography with hybrid linear ion trap Orbitrap mass spectrometry (HPLC-LTQ/Orbitrap) was developed to screen PCs that have the same characteristic product ions. This approach was used for the fragmentation pattern analysis of glutathione (GSH) and PC standards, which allowed identification of the fragmentation pathways of their derivatives isolated from rice roots, stems and leaves. METHODS: In this study, we developed a method to detect and identify PCs and their derivatives in rice based on HPLC/LTQ-Orbitrap. Spectrum interpretation and MS/MS fragmentation patterns of PCs provide sufficient information to discover the novel PC derivatives. This approach includes precursor ion scan and product ion scan to detect and character the novel PC derivatives. RESULTS: Based on HCD-MS/MS fragmentation patterns, four PCs and 18 PC derivatives were identified. Among them, seven PC derivatives, i.e., iso-PC2 (Asn), iso-PC3 (Asn), iso-PC2 (Cys), des-γGlu-iso-PC3 (Ser), des-Cys-iso-PC2 (Glu), des-Cys-iso-PC3 (Glu) and des-Cys-iso-PC4 (Glu), have not been previously reported. This method was validated by profiling GSH, PCs and PC derivatives in rice. Preliminary results revealed that PCs and their derivatives, except GSH, are markedly induced by Cd treatment. CONCLUSIONS: The HPLC/LTQ-Orbitrap method was successfully developed for the identification of PCs and their derivatives. The C-terminal linked to Gly is replaced with Glu, Ser, Asn, Gln or Cys, thereby creating a family of chemicals that share several structural properties. This technique could be particularly useful for investigators studying plant metabolomics. Copyright © 2016 John Wiley & Sons, Ltd.


Subject(s)
Cadmium/toxicity , Chromatography, High Pressure Liquid/methods , Oryza/chemistry , Phytochelatins/chemistry , Phytochelatins/metabolism , Tandem Mass Spectrometry/methods , Biodegradation, Environmental , Oryza/drug effects , Oryza/metabolism
16.
Sci Total Environ ; 569-570: 97-104, 2016 Nov 01.
Article in English | MEDLINE | ID: mdl-27341110

ABSTRACT

Cadmium (Cd) pollution is a serious widespread environmental problem that not only destroys the microbial ecology of soil and decreases crop production, but also poses a serious risk to human health. Many methods have been used for the remediation of Cd pollution but none of these is totally satisfactory. Microbial remediation strategies have attracted increasing interest since they are environmentally friendly and cost-effective. In the present study, three Cd-resistant bacteria were isolated and evaluated for potential application in Cd bioremediation. Based on their morphological, physiological and biochemical characteristics, together with 16S rDNA gene sequence analyses, bacteria were identified as Stenotrophomonas acidaminiphila (2#), Pseudomonas aeruginosa (9#) and Delftia tsuruhatensis (12#). Pseudomonas aeruginosa showed very high tolerance to metals, especially Cd (2200mg/L), Zn (1800mg/L) and Pb (1200mg/L), and is thought to be a multi-metal-resistant bacterium. Pseudomonas aeruginosa was also sensitive to 13 different antibiotics. The effects of the bacterial strains on the growth of rice plants and their ability to reduce Cd accumulation from Cd-contaminated soils in pot experiments were also evaluated. For Oryza sativa L. A grown in contaminated soil (3mg/kg Cd), the accumulation of Cd was decreased by 31.2 and 25.5% in brown rice and polished rice, respectively, by strain 9#; Pseudomonas aeruginosa was more effective in reducing Cd accumulation in rice grains than a mixture of strains. For Oryza sativa L. B, a mixture of strains acting synergistically was more effective than a single strain in reducing Cd accumulation; treatment with mixed strains (strains+3mg/kg Cd) resulted in 41.3, 35.9, and 32.6% reductions in Cd accumulation in unhulled rice, brown rice and polished rice, respectively. Although different results were obtained for two rice varieties, it can still be concluded that Cd-resistant bacteria are suitable for reducing Cd accumulation in rice grains and show potential for bioremediation of Cd-contaminated soils.


Subject(s)
Cadmium/metabolism , Delftia/metabolism , Oryza/metabolism , Pseudomonas aeruginosa/metabolism , Soil Microbiology , Soil Pollutants/metabolism , Stenotrophomonas/metabolism , Biodegradation, Environmental , DNA, Bacterial/genetics , Delftia/genetics , Drug Resistance, Bacterial , Edible Grain/metabolism , Pseudomonas aeruginosa/genetics , RNA, Ribosomal, 16S/genetics , Stenotrophomonas/genetics
17.
J Chromatogr A ; 1451: 67-74, 2016 Jun 17.
Article in English | MEDLINE | ID: mdl-27208989

ABSTRACT

A high-throughput method was developed using liquid chromatography-triple quadrupole mass spectrometry (LC-MS/MS) for the profiling and quantification of 43 phytohormones and their major metabolites, including auxins, abscisic acid, jasmonic acid, salicylic acid, cytokinins and gibberellins in a single sample extract. Considerable matrix effects (MEs) were observed (with most ME values in the range of 29%-84%, but maximum MEs of more than 115%, even up to 206%, existed) in sample extracts for most of the compounds studied. The application of the proposed binary solid-phase extraction using polymer anion and polymer cation exchange resins, was performed to purify 25 acidic and 18 alkaline phytohormones and their major metabolites prior to the LC-MS/MS analysis, which markedly reduced the MEs to acceptable levels, with ME values in the range of ±15%. Moreover, all of the isomers of cytokinins and their metabolites were fully separated on a sub-2µm particle C18 reverse-phase column with the optimized mobile phase consisting of methanol and 5mM ammonium formate. The method showed good linearity for all 43 analytes with regression coefficients (R(2))>0.991. Limits of detection ranged from 0.19 to 7.57 fmol for auxin, gibberellins, abscisic acid and their metabolites, 29.7 fmol for jasmonic acid, 18.1 fmol for salicylic acid, and from 0.03 to 0.31 fmol for cytokinins and their metabolites. The mean recoveries for all of the analytes were from 70.7 to 118.5%, and the inter-day precisions (n=6) were less than 18.7%, with intra-day precisions (n=6) within 25.4%. Finally, 20 compounds were successfully quantified in rice sample profiles using the proposed method, which will greatly facilitate the understanding of hormone-related regulatory networks that influence rice growth and development. To our knowledge, there are limited reports that measure this level of phytohormone species in rice samples using a single analysis.


Subject(s)
Chromatography, Liquid/methods , Oryza/chemistry , Plant Growth Regulators/analysis , Plant Growth Regulators/metabolism , Solid Phase Extraction/methods , Tandem Mass Spectrometry/methods , Abscisic Acid/analysis , Abscisic Acid/chemistry , Abscisic Acid/metabolism , Cyclopentanes/analysis , Cyclopentanes/chemistry , Cyclopentanes/metabolism , Cytokinins/analysis , Cytokinins/chemistry , Cytokinins/metabolism , Gibberellins/analysis , Gibberellins/chemistry , Gibberellins/metabolism , Indoleacetic Acids/analysis , Indoleacetic Acids/chemistry , Indoleacetic Acids/metabolism , Ion Exchange Resins/chemistry , Oryza/metabolism , Oxylipins/analysis , Oxylipins/chemistry , Oxylipins/metabolism , Plant Growth Regulators/chemistry
18.
Se Pu ; 33(7): 715-21, 2015 Jul.
Article in Chinese | MEDLINE | ID: mdl-26672200

ABSTRACT

A method was developed for the determination of 17 cytokinins in rice by solid phase extraction and liquid chromatography-tandem mass spectrometry. The rice samples were cryogenically ground under liquid nitrogen and extracted with methanol-water (80:20, v/v) at 4 °C for 16 h. The supernatant was purified on a column packed with polymer cation exchange resin (PCX). The samples were transported and eluted on an analytical column ZORBAX Extend-C18 (100 mm x 2.1 mm, 1.8 µm) by methanol and 5 mmol/L ammonium formate aqueous solution. All the analytes were detected in selected reaction monitoring (SRM) mode under positive electrospray ionization (ESI+) and quantified by external standard method. The separation conditions were optimized in order to achieve the sufficient separation for the several isomers of cytokinins, such as trans-zeatin-7-glucoside (tZ7G), trans-zeatin-9-glucoside (tZ9G), and trans-zeatin-O-glucoside (tZOG). Moreover, the extraction efficiency of different extraction solvents and clean-up effects of PCX cartridge for each analyte were further investigated. The results showed that the correlation coefficients were not less than 0.9984 in the linear range, and the limits of detection were ranged from 0.01 to 0.05 ng/g. The mean recoveries of the 17 cytokinins at three spiked levels of 0.2, 1 and 5 ng/g were from 60.2% to 125.4% with the relative standard deviations (RSDs) of 5.4%-29.7% (n = 6). Finally, five endogenous cytokinins were successfully quantified in real sample, and their contents were between 0.02 and 0.93 ng/g. It means that this method is reliable for quantitative analysis of cytokinins in rice.


Subject(s)
Cytokinins/chemistry , Oryza/chemistry , Chromatography, Liquid , Mass Spectrometry , Solid Phase Extraction
19.
J Sep Sci ; 38(23): 4146-52, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26541262

ABSTRACT

A sensitive and robust high-performance liquid chromatography coupled with electrospray tandem mass spectrometry method for the identification and quantification of glutathione and phytochelatins from rice was developed. Homogenized samples were extracted with water containing 100 mM dithiothreitol, and solid-phase extraction using polymer anion exchange resin was employed for sample purification. Chromatography was performed on a polymeric column with acetonitrile and water containing 0.1% formic acid as the mobile phase at the flow rate of 300 µL/min. The limit of quantitation was 6-100 nM. This assay showed excellent linearity for both glutathione and phytochelatins over physiological normal ranges, with correlation coefficients (r) > 0.9976. Recoveries for four biothiols were within the range of 76-118%, within relative standard deviations less than 15%. The intraday precision (n = 7) was 2.1-13.3%, and the interday precision over 15 days was 4.3-15.2%. The optimized method was applied to analyze tissue samples from rice grown using nutrient solutions with three different cadmium concentrations (0, 50, and 100 µM). With increasing cadmium concentrations, the content of phytochelatin 2 and phytochelatin 3 in rice roots increased, in contrast to most phytochelatins, and the content of glutathione in rice stems and roots decreased significantly.


Subject(s)
Chemistry Techniques, Analytical/methods , Chromatography, High Pressure Liquid , Oryza/chemistry , Phytochelatins/chemistry , Polymers/chemistry , Spectrometry, Mass, Electrospray Ionization , Glutathione/analysis , Plant Roots/chemistry , Plant Stems/chemistry , Sensitivity and Specificity
20.
Se Pu ; 33(1): 35-9, 2015 Jan.
Article in Chinese | MEDLINE | ID: mdl-25958665

ABSTRACT

A high performance liquid chromatographic method with fluorescence detection and precolumn derivatization (HPLC-FLD) has been developed for the determination of seven biothiols including Cys, GSH, and phytochelatins (PCs: PC2, PC3, PC4, PC5 and PC6) in rice. The samples were ultrasonically extracted with 0.1% trifluoroacetic acid (TFA) containing 6. 3 mmol/L diethylenetriaminepentaacetic acid (DTPA), and then the seven biothiols were derivatized with monobromobimane (mBrB) as derivatization agent in 4-(2-hydroxyethyl)-1-piperazine propanesulfonic acid (HEPPS) buffer solution (pH 8.0). The separation was performed on an Agilent Eclipse Plus C18 column (50 mm x 4.6 mm, 5 microm) with gradient elution of 0.1% TFA solution (the pH value was adjusted to 2.5 with hydrochloric acid) and acetonitrile as mobile phases at a flow rate of 0.8 mL/min. The detection was performed at 380 nm for excitation and 470 nm for emission. The calibration curves of the seven biothiols showed good linearity in the concentration range of 0.7-100.0 mg/L with the correlation coefficients (r2) > or = 0.9991. The limits of detection were 0.03-0.20 mg/L. The recoveries of standard addition were in the range of 89.26%-99.42% with the relative standard deviations (RSDs, n = 6) of 2.05%-5.87%. The method is sensitive, accurate, reproducible and suitable for the simultaneous determination of Cys, GSH, PC2, PC3, PC4, PC5 and PC6 in rice.


Subject(s)
Oryza/chemistry , Sulfhydryl Compounds/analysis , Chromatography, High Pressure Liquid , Fluorescence
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