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1.
Life Sci ; 321: 121620, 2023 May 15.
Article in English | MEDLINE | ID: mdl-37011534

ABSTRACT

AIMS: Natural Killer T (NKT) cells are reported to be both pro- and anti-atherosclerotic. With this meta-analysis, we evaluated the NKT population and their subsets in regulating the atherosclerotic disease in mice. MAIN METHODS: Eighteen pre-clinical (mice, n = 1276) and 6 clinical observational studies (humans, n = 116) met the eligibility criteria for inclusion. Random effects model was used and standard mean difference (SMD) was calculated for the cell counts and aortic lesion area. KEY FINDINGS: Lesion area decreased in the absence of whole NKT cell population (-1.33[95%CI, -2.14, -0.52]), and in the absence of only iNKT subset (-0.66[95%CI, -1.69, 0.37]). However, lesion area increased after over-expression/activation of iNKTs (1.40[95%CI, 0.28, 2.52]). Atherogenic diet (AD) or high fat diet (HFD) increased the number of NKT cells (2.51[95%CI, 1.42, 3.61]), whereas the iNKT cell numbers and iNKT cell-specific gene expression decreased in mice (-2.04[95%CI, -3.34, -0.75]) and atherosclerotic patients (-1.81[95 % CI, -2.89, -0.74]). SIGNIFICANCE: Here we show that, NKT and iNKT cells promote atherosclerosis. In general, NKT cell population increases with the progression of the plaque in mice and the numbers of iNKT cells reduce once the disease is established both in mice and humans.


Subject(s)
Atherosclerosis , Natural Killer T-Cells , Humans , Mice , Animals , Natural Killer T-Cells/metabolism , Natural Killer T-Cells/pathology , Mice, Knockout , Atherosclerosis/metabolism , Mice, Inbred C57BL
2.
J Biomol Struct Dyn ; 40(21): 11216-11228, 2022.
Article in English | MEDLINE | ID: mdl-34308796

ABSTRACT

Studies on the intermediate states of proteins provide essential information on folding pathway and energy landscape of proteins. Osmolytes, known to alter the stability of proteins, might also affect the structure and energy states of folding intermediates. This was examined using cytochrome c (Cyt) as a model protein which forms a spectroscopically detectable intermediate during thermal denaturation transition. Most of the secondary structure and the native heme-ligation were intact in the intermediate state of the protein. Denaturants, urea and guanidinium hydrochloride, and ionic salt destabilizes the intermediate and drive the protein to follow two-state transition. The effect of polyol class of osmolytes, glycol, glycerol, erythritol, xylitol and sorbitol (with OH-groups two to six), on the intermediate was studied using Soret absorbance and far-UV circular dichroism. With the increasing concentration of any of the polyols, the transition-midpoint temperature (Tm) and the enthalpy change (ΔH) for native to intermediate transition were decreased. This indicated that the intermediate was destabilized by the polyols. However, the polyols increased the overall stability of the protein by increasing Tm and ΔH for intermediate to unfolded transition, except for glycol which destabilized the protein. These results show that the polyols could alter the energy state of the intermediate, and the effect of lower and higher polyols might be different on the stability and folding pathway of the protein.Communicated by Ramaswamy H. Sarma.


Subject(s)
Cytochromes c , Polymers , Protein Denaturation , Polymers/chemistry , Thermodynamics , Circular Dichroism , Glycols , Protein Folding
3.
J Phys Chem B ; 124(45): 10077-10088, 2020 11 12.
Article in English | MEDLINE | ID: mdl-33143422

ABSTRACT

Osmolytes are known to stabilize proteins under stress conditions. Thermal denaturation studies on globular proteins (ß-lactoglobulin, cytochrome c, myoglobin, α-chymotrypsin) in the presence of ethylene glycol (EG), a polyol class of osmolyte, demonstrate a unique property of EG. EG stabilizes proteins against cold denaturation and destabilizes them during heat-induced denaturation. Further, chemical denaturation experiments performed at room temperature and at a sub-zero temperature (-10 °C) show that EG stabilizes the proteins at subzero temperature but destabilizes them at room temperature. The experiments carried out in the presence of glycerol, however, showed that glycerol stabilizes proteins against all of the denaturing conditions. This differential effect has not been reported for any other polyol class of osmolyte and might be specific to EG. Moreover, molecular dynamics simulations of all of the four proteins were carried out at three different temperatures, 240, 300, and 340 K, in the absence and presence of EG (20 and 40%). The results suggest that EG preferably accumulates around the hydrophobic residues and reduces the hydrophobic hydration of the proteins at a low temperature leading to stabilization of the proteins. At 340 K, the preferential hydration of the proteins is significantly reduced and the preferential binding of EG destabilizes the proteins like common denaturants.


Subject(s)
Ethylene Glycol , Glycerol , Molecular Dynamics Simulation , Protein Denaturation , Temperature , Thermodynamics
4.
J Phys Chem B ; 115(49): 14760-7, 2011 Dec 15.
Article in English | MEDLINE | ID: mdl-22014160

ABSTRACT

Protein-surfactant interaction is widely studied to understand stability and structural changes in proteins. In this Article, we have investigated SDS-induced unfolding of RNase A using absorbance, intrinsic fluorescence of the protein, anisotropy, TNS fluorescence, and near- and far-UV circular dichroism. Unfolding titration curves obtained from the absorbance and fluorescence changes were fitted into a five-state protein unfolding model by assuming formation of three intermediate states. Free energy changes and m-values of all four transitions between the native and unfolded state were evaluated. The transitions are categorized into two different regions. Region I, up to 0.5 mM of SDS, involves ionic interaction between the protein and SDS where the secondary and tertiary structure of the protein is altered to a less extent. In region II, hydrophobic interaction dominates and has two distinct transitions. The first transition arises from the aggregation of surfactant molecules around the protein hydrophobic sites. In the following transition, the micelles probably expand more, and a few more hydrophobic sites are occupied by the surfactant. In this region, the tertiary contacts are completely broken, and almost 50% of the secondary structure is lost. The aggregation of SDS around the protein starts well below the CMC. These conformational changes can be explained by the necklace and beads model, and the free energy of formation of such a complex for the RNase A-SDS system is found to be 5.2 (±1.0) kcal mol(-1). The probable interaction sites and the mechanism of unfolding have been discussed in detail.


Subject(s)
Ribonuclease, Pancreatic/chemistry , Sodium Dodecyl Sulfate/chemistry , Animals , Cattle , Circular Dichroism , Hydrophobic and Hydrophilic Interactions , Protein Structure, Secondary , Protein Unfolding , Spectrometry, Fluorescence , Surface-Active Agents/chemistry
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