Hospital-based case-control study of risk factors for early neonatal mortality in the Gaza Strip.

Background: Early neonatal death is an essential epidemiological indicator of maternal and child health. Aims: To identify risk factors for early neonatal deaths in the Gaza Strip. Methods: This hospital-based case-control study included 132 women who experienced neonatal deaths from January to September 2018. The control group comprised 264 women who were selected using systematic random sampling and gave birth to live newborns at the time of data collection. Results: The controls who had no history of neonatal death or stillbirth were less likely to have an early neonatal death than women who had such history. The controls who did not have meconium aspiration syndrome or amniotic fluid complications were less likely to have an early neonatal death than women who experienced these complications during delivery. The controls who had a singleton birth outcome were less likely to have an early neonatal death than women who had multiple births. Conclusion: Interventions are needed to provide preconception care, improve the quality of intrapartum and postnatal care, provide high-quality health education, and improve the quality of care provided by neonatal intensive care units in the Gaza Strip.

Viruses representing two new genomovirus species identified in citrus from Tunisia.

Using a high-throughput sequencing approach, we identified four genomoviruses (family Genomoviridae) associated with a sweet orange (Citrus sinensis) plant collected in Tunisia. The ssDNA genomes of these genomoviruses, which were amplified, cloned and Sanger sequenced, range in size from 2156 to 2191 nt. Three of these viruses share > 99% full-genome pairwise sequence identity and are referred to as citrus Tunisia genomovirus 1 (CTNGmV-1). The CTNGmV-1 isolates share < 62% genome-wide pairwise nucleotide sequence identity with other genomoviruses and belong to the genus Gemykolovirus. The genome of the fourth virus, which was called CTNGmV-2, shares < 68% nucleotide sequence identity with other genomoviruses and belongs to the genus Gemycircularvirus. Based on the species demarcation criteria for members of the family Genomoviridae, CTNGmV-1 and -2 would each represent a new species. Although found associated with Citrus sp. plants, it is likely that these viruses infect fungi or other organisms associated with the plants.

Molecular characterization of faba bean necrotic yellows viruses in Tunisia.

Faba bean necrotic yellows virus (FBNYV) (genus Nanovirus; family Nanoviridae) has a genome comprising eight individually encapsidated circular single-stranded DNA components. It has frequently been found infecting faba bean (Vicia faba L.) and chickpea (Cicer arietinum L.) in association with satellite molecules (alphasatellites). Genome sequences of FBNYV from Azerbaijan, Egypt, Iran, Morocco, Spain and Syria have been determined previously and we now report the first five genome sequences of FBNYV and associated alphasatellites from faba bean sampled in Tunisia. In addition, we have determined the genome sequences of two additional FBNYV isolates from chickpea plants sampled in Syria and Iran. All individual FBNYV genome component sequences that were determined here share > 84% nucleotide sequence identity with FBNYV sequences available in public databases, with the DNA-M component displaying the highest degree of diversity. As with other studied nanoviruses, recombination and genome component reassortment occurs frequently both between FBNYV genomes and between genomes of nanoviruses belonging to other species.

The effect of viroid infection of citrus trees on the amoebicidal activity of 'Maltese half-blood' (Citrus sinensis) against trophozoite stage of Acanthamoeba castellanii Neff.

In order to promote a local Tunisian product, this study was designed to examine, for the first time, the anti-Acanthamoeba activity (Acanthamoeba castellanii Neff) of the essential oils of Tunisian Citrus sinensis peels (Maltese half-blood) and the effect of viroid plant infection on this activity. To do so, three samples of peels' essential oils were studied: from a healthy plant (Control), a plant inoculated with Citrus exocortis viroid (CEVd) and one inoculated with hot stunt cachexia viroid (HSVd). The samples were extracted by hydrodistillation from dried peels and characterized by GC-MS. Limonene was the major component with a percentage ranging from 90.76 to 93.34% for (CEVd) sample and (Control), respectively. Anti-Acanthamoeba activity of the tested oils was determined by the Alamar Blue® assay. Primary results showed a strong potential anti-Acanthamoeba activity with an IC50 ranging from 36.6 to 54.58 µg/ml for (HSVd) and (CEVd) samples, respectively. In terms of the effect of viroid infection, a strong positive correlation was observed between different chemical classes and anti-Acanthamoeba activity.

A Survey of Viruses Affecting Faba Bean (Vicia faba) in Tunisia Includes First Record of Soybean dwarf virus.

A survey was conducted in April 2003 to identify viruses infecting faba bean (Vicia faba L.) in six regions (Beja, Bizerte, Cap-bon, Le Kef, Siliana, and Zaghouan) in Tunisia. A total of 292 faba bean samples with symptoms of viral infection (leaf rolling, yellowing, and mosaic) were collected. The samples were tested at the virology laboratory of the International Center for Agricultural Research in the Dry Areas (ICARDA), Syria, for 11 viruses using the tissue-blot immunoassay procedure (3). Specific rabbit polyclonal antisera were used to test for Chickpea chlorotic dwarf virus (CpCDV) (provided by H. J. Vetten, BBA, Braunschweig, Germany), Alfalfa mosaic virus (AMV), Bean yellow mosaic virus (BYMV), Broad bean mottle virus (BBMV), Broad bean stain virus (BBSV), Cucumber mosaic virus (CMV), and Pea seedborne mosaic virus (PSbMV) (ICARDA, Aleppo, Syria). In addition, four specific monoclonal antibodies were used to detect Bean leaf roll virus (BLRV) (4B10) (2), Beet western yellows virus (BWYV) (ATCC PVAS-647; American Type Culture Collection, Manassas, VA), Faba bean necrotic yellows virus (FBNYV) (3-2E9) (1), and Soybean dwarf virus (SbDV) (ATCC PVAS-650). Serological tests showed that BBMV, a beetle-transmitted and seedborne virus identified in 23.3% (68 samples) of the samples tested, was the most common. BLRV, FBNYV, BWYV, BYMV, SbDV, and PSbMV were detected in 56, 33, 31, 10, 5, and 1 sample(s) of 292 samples tested, respectively. AMV, BBSV, CMV, and CpCDV were not detected in any samples tested. In Tunisia, BLRV, BWYV, BYMV, FBNYV, and PSbMV have previously been reported in faba bean (4), but to our knowledge, this is the first record of SbDV affecting faba bean in Tunisia, where it was detected in two fields in the Cap-bon Region. In sodium dodecyl sulfate-polyacrylamide gel electrophoresis followed by western blots, extracts from SbDV-infected plants were observed to contain 23-kDa structural proteins, which reacted strongly with SbDV monoclonal antibodies. Transmission tests showed that the samples, which reacted with SbDV monoclonal antibodies, were transmitted to faba bean plants by the pea aphid (Acyrthosiphon pisum Harris) in a persistent manner. To our knowledge, this is the first report of SbDV naturally infecting faba bean in Tunisia and it could cause a serious problem to other leguminous crops grown in Tunisia, such as French bean and peas, which are hosts for the virus. References: (1) A. Franz and K. M. Makkouk Ann. Appl. Biol. 128:255, 1996. (2) L. Katul. Characterization by serology and molecular biology of bean leaf roll virus and faba bean necrotic yellows virus. PhD thesis. University of Gottingen, Gottingen, Germany, 1992. (3) K. M. Makkouk and A. Comeau. Eur. J. Plant Pathol. 100:71, 1994. (4) A. Najar et al. Phytopathol. Mediterr. 39:423, 2000.

First Record of Faba bean necrotic yellows virus and Beet western yellows virus Infecting Faba Bean in Tunisia.

A survey was conducted in April 2000 to identify viruses infecting faba bean (Vicia faba L.) in seven regions (Beja, Bizerte, Cap-bon, Jendouba, Kairouan, Siliana, and Zaghouan) of Tunisia. Around 4,000 random samples were collected from 34 fields (100 to 200 samples per field). Samples were tested by tissue-blot immunoassay procedure (2) at the Virology Laboratory of INRAT for the presence of 14 different viruses. All antisera used were specific, including those for Faba bean necrotic yellows virus (FBNYV) (1) and Beet western yellows virus (BWYV) (ATCC-PVAS-647). Broad bean mottle, a beetle-transmitted and seedborne virus, was the most abundant with an average incidence of 2.3%. The highest disease incidence occurred with BWYV, which was in 20 and FBNYV in 4 of 98 random samples from a field in the Siliana region; and with BWYV in 7 and BBMV in 21 of 120 samples from a field in the Jendouba region. Other viruses such as broad bean stain, cucumber mosaic, and bean leaf roll were detected rarely (<1%). This is the first record of FBNYV and BWYV infecting faba bean in Tunisia. BWYV was detected in 1.2% of the samples tested collected from 20 fields comprising all seven regions. FBNYV was detected in 0.9% of the samples tested collected from 13 fields comprising all except the Capbon region. References: (1) A. Franz et al. Ann. Appl. Biol. 128:255, 1996. (2) K. M. Makkouk and A. Comeau. Eur. J. Plant Pathol. 100:71, 1994.