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1.
J Gen Appl Microbiol ; 68(2): 109-116, 2022 Sep 15.
Article in English | MEDLINE | ID: mdl-35831135

ABSTRACT

The aromatic compound 3-amino-4-hydroxybenzoic acid (3,4-AHBA) can be employed as a raw material for high-performance industrial plastics. The aim of this study is to produce 3,4-AHBA via a recombinant Streptomyces lividans strain containing griI and griH genes derived from Streptomyces griseus using culture medium with glucose and/or xylose, which are the main components in lignocellulosic biomass. Production of 3,4-AHBA by the recombinant S. lividans strain was successful, and the productivity was affected by the kind of sugar used as an additional carbon source. Metabolic profiles revealed that L aspartate-4-semialdehyde (ASA), a precursor of 3,4-AHBA, and coenzyme NADPH were supplied in greater amounts in xylose medium than in glucose medium. Moreover, cultivation in TSB medium with a mixed sugar (glucose/xylose) was found to be effective for 3,4-AHBA production, and optimal conditions for efficient production were designed by changing the ratio of glucose to xylose. The best productivity of 2.70 g/L was achieved using a sugar mixture of 25 g/L glucose and 25 g/L xylose, which was 1.5 times higher than the result using 50 g/L glucose alone. These results suggest that Streptomyces is a suitable candidate platform for 3,4-AHBA production from lignocellulosic biomass-derived sugars under appropriate culture conditions.


Subject(s)
Streptomyces lividans , Xylose , Aminobenzoates , Fermentation , Glucose/metabolism , Hydroxybenzoates/metabolism , Streptomyces lividans/genetics , Streptomyces lividans/metabolism , Xylose/metabolism
2.
Biotechnol J ; 14(6): e1800478, 2019 Jun.
Article in English | MEDLINE | ID: mdl-30810277

ABSTRACT

3-Phenyllactic acid (PhLA) is useful as a start-up material in the pharmaceutical and biorefinery industries. To enhance the production of PhLA from glucose using recombinant Escherichia coli, the effects of glucose concentration and oxygen limitation on PhLA production are assessed in a fed-batch system using dissolved oxygen (DO)-stat method. The highest titer of PhLA (7.3 g L-1 ) is observed with a high concentration of glucose and under oxygen-limited conditions (DO = 0 ppm). Under oxygen limitation, cell growth and the formation of acetate and l-phenylalanine (Phe) by-products after 72 h of cultivation are reduced by 30%, 70%, and 81%, respectively, as compared to that under high DO conditions (DO = 5 ppm). Gene expression levels are compared between low and high DO conditions by quantitative polymerase chain reaction (qPCR) analysis. Several genes in the glycolysis (gapA and pykA), pentose phosphate (tktA), and early shikimate pathways for PhLA biosynthesis (aroF, aroG, and aroH) are upregulated under oxygen limitation. The results suggest that oxygen limitation affects metabolism in the shikimate pathway at both metabolic and transcriptional levels and that controlling the DO level is critical for enhanced production of a variety of aromatic compounds through the shikimate pathway.


Subject(s)
Lactates/metabolism , Escherichia coli/metabolism , Escherichia coli Proteins/metabolism , Gene Expression/physiology , Oxygen/metabolism , Shikimic Acid/metabolism
3.
Int J Mol Sci ; 18(6)2017 May 30.
Article in English | MEDLINE | ID: mdl-28556796

ABSTRACT

Chitin-binding lectins form the hevein family in plants, which are defined by the presence of single or multiple structurally conserved GlcNAc (N-acetylglucosamine)-binding domains. Although they have been used as probes for chito-oligosaccharides, their detailed specificities remain to be investigated. In this study, we analyzed six chitin-binding lectins, DSA, LEL, PWM, STL, UDA, and WGA, by quantitative frontal affinity chromatography. Some novel features were evident: WGA showed almost comparable affinity for pyridylaminated chitotriose and chitotetraose, while LEL and UDA showed much weaker affinity, and DSA, PWM, and STL had no substantial affinity for the former. WGA showed selective affinity for hybrid-type N-glycans harboring a bisecting GlcNAc residue. UDA showed extensive binding to high-mannose type N-glycans, with affinity increasing with the number of Man residues. DSA showed the highest affinity for highly branched N-glycans consisting of type II LacNAc (N-acetyllactosamine). Further, multivalent features of these lectins were investigated by using glycoconjugate and lectin microarrays. The lectins showed substantial binding to immobilized LacNAc as well as chito-oligosaccharides, although the extents to which they bound varied among them. WGA showed strong binding to heavily sialylated glycoproteins. The above observations will help interpret lectin-glycoprotein interactions in histochemical studies and glyco-biomarker investigations.


Subject(s)
Antimicrobial Cationic Peptides/metabolism , Chitin/metabolism , Lectins/metabolism , Plant Lectins/metabolism , Sugars/metabolism , Chromatography, Affinity
4.
Appl Microbiol Biotechnol ; 101(13): 5279-5290, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28396925

ABSTRACT

Caffeic acid (3,4-dihydroxycinnamic acid) serves as a building block for thermoplastics and a precursor for biologically active compounds and was recently produced from glucose by microbial fermentation. To produce caffeic acid from inedible cellulose, separate hydrolysis and fermentation (SHF) and simultaneous saccharification and fermentation (SSF) reactions were compared using kraft pulp as lignocellulosic feedstock. Here, a tyrosine-overproducing Escherichia coli strain was metabolically engineered to produce caffeic acid from glucose by introducing the genes encoding a 4-hydroxyphenyllactate 3-hydroxylase (hpaBC) from Pseudomonas aeruginosa and tyrosine ammonia lyase (fevV) from Streptomyces sp. WK-5344. Using the resulting recombinant strain, the maximum yield of caffeic acid in SSF (233 mg/L) far exceeded that by SHF (37.9 mg/L). In the SSF with low cellulase loads (≤2.5 filter paper unit/g glucan), caffeic acid production was markedly increased, while almost no glucose accumulation was detected, indicating that the E. coli cells experienced glucose limitation in this culture condition. Caffeic acid yield was also negatively correlated with the glucose concentration in the fermentation medium. In SHF, the formation of by-product acetate and the accumulation of potential fermentation inhibitors increased significantly with kraft pulp hydrolysate than filter paper hydrolysate. The combination of these inhibitors had synergistic effects on caffeic acid fermentation at low concentrations. With lower loads of cellulase in SSF, less potential fermentation inhibitors (furfural, 5-hydroxymethyfurfural, and 4-hydroxylbenzoic acid) accumulated in the medium. These observations suggest that glucose limitation in SSF is crucial for improving caffeic acid yield, owing to reduced by-product formation and fermentation inhibitor accumulation.


Subject(s)
Caffeic Acids/metabolism , Escherichia coli/genetics , Fermentation , Lignin/metabolism , Acetates/metabolism , Ammonia-Lyases/genetics , Biomass , Caffeic Acids/chemistry , Caffeic Acids/isolation & purification , Cellulase/metabolism , Culture Media/chemistry , Escherichia coli/metabolism , Furaldehyde/analogs & derivatives , Furaldehyde/metabolism , Glucose/metabolism , Hydrogen-Ion Concentration , Hydrolysis , Metabolic Engineering/methods , Pseudomonas aeruginosa/genetics , Recombinant Proteins/metabolism , Streptomyces/genetics
5.
Bioresour Technol ; 198: 410-7, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26409852

ABSTRACT

The production of the bioplastic precursor 3-amino-4-hydroxybenzoic acid (3,4-AHBA) from sweet sorghum juice, which contains amino acids and the fermentable sugars sucrose, glucose and fructose, was assessed to address the limitations of producing bio-based chemicals from renewable feedstocks. Recombinant Corynebacterium glutamicum strain KT01 expressing griH and griI derived from Streptomyces griseus produced 3,4-AHBA from the sweet sorghum juice of cultivar SIL-05 at a final concentration (1.0 g l(-1)) that was 5-fold higher than that from pure sucrose. Fractionation of sweet sorghum juice by nanofiltration (NF) membrane separation (molecular weight cut-off 150) revealed that the NF-concentrated fraction, which contained the highest concentrations of amino acids, increased 3,4-AHBA production, whereas the NF-filtrated fraction inhibited 3,4-AHBA biosynthesis. Amino acid supplementation experiments revealed that leucine specifically enhanced 3,4-AHBA production by strain KT01. Taken together, these results suggest that sweet sorghum juice is a potentially suitable feedstock for 3,4-AHBA production by recombinant C. glutamicum.


Subject(s)
Aminobenzoates/chemical synthesis , Corynebacterium glutamicum/metabolism , Hydroxybenzoates/chemical synthesis , Sorghum/chemistry , Amino Acids/metabolism
6.
J Nanobiotechnology ; 13: 15, 2015 Feb 13.
Article in English | MEDLINE | ID: mdl-25890025

ABSTRACT

BACKGROUND: The hepatitis B virus core (HBc) particle is known as a promising new carrier for the delivery of drugs and nucleic acids. However, since the arginine-rich domain that is located in the C-terminal region of the HBc monomer binds to the heparan sulphate proteoglycan on the cell surface due to its positive charge, HBc particles are introduced non-specifically into a wide range of cells. To avoid non-specific cellular uptake with the intent to control the ability of cell targeting, we individually replaced the respective arginine (R) residues of the arginine-rich domain located in amino acid positions 150-159 in glycine (G) residues. RESULTS: The mutated HBc particles in which R154 was replaced with glycine (G) residue (R154G) showed a drastic decrease in the ability to bind to the heparan sulphate proteoglycan and to avoid non-specific cellular uptake by several types of cancer cells. CONCLUSIONS: Because this mutant particle retains most of its C-terminal arginine-rich residues, it would be useful in the targeting of specificity-altered HBc particles in the delivery of nucleic acids.


Subject(s)
Arginine/genetics , Drug Carriers/pharmacokinetics , Hepatitis B virus/chemistry , Amino Acid Substitution , Drug Carriers/chemistry , Drug Carriers/metabolism , Fluorescence , Glycine/genetics , HeLa Cells/drug effects , HeLa Cells/metabolism , Heparan Sulfate Proteoglycans/metabolism , Hepatitis B virus/genetics , Humans , Microscopy, Atomic Force , Mutagenesis, Site-Directed , Mutation , Surface Plasmon Resonance
7.
Fish Physiol Biochem ; 39(6): 1619-30, 2013 Dec.
Article in English | MEDLINE | ID: mdl-23740100

ABSTRACT

Osmerus (Spirinchus) lanceolatus egg lectin (OLL) is a member of the rhamnose-binding lectin (RBL) family which is mainly found in aqueous beings. cDNA of OLL was cloned, and its genomic architecture was revealed. The deduced amino acid (aa) sequence indicated that OLL was composed of 213 aa including 95 aa of domain N and 97 aa of domain C. N and C showed 73 % sequence identity and contained both -ANYGR- and -DPC-KYL-peptide motifs which are conserved in most of the RBL carbohydrate recognition domains. The calculated molecular mass of mature OLL was 20,852, consistent with the result, and 20,677.716, from mass spectrometry. OLL was encoded by eight exons: exons 1 and 2 for a signal peptide; exons 3-5 and 6-8 for N- and C-domains, respectively. Surface plasmon resonance spectrometric analyses revealed that OLL showed comparable affinity for Galα- and ß-linkages, whereas Silurus asotus lectin (SAL), a catfish RBL, bound preferentially to α-linkages of neoglycoproteins. The Kd values of OLL and SAL against globotriaosylceramide (Gb3) were 1.69 × 10⁻5 M for and 2.81 × 10⁻6 M, respectively. Thus, the carbohydrate recognition property of OLL is slightly different from that of SAL. On the other hand, frontal affinity chromatography revealed that both OLL and SAL interacted with only glycolipid-type oligosaccharides such as Gb3 trisaccharides, not with N-linked oligosaccharides. The domain composition of these RBLs and an analytical environment such as the "cluster effect" of a ligand might influence the binding between RBL and sugar chains.


Subject(s)
Carbohydrate Metabolism , Fish Proteins/metabolism , Lectins/metabolism , Osmeriformes/metabolism , Amino Acid Sequence , Animals , Female , Fish Proteins/genetics , Genome Components , Glycolipids/metabolism , Glycoproteins/metabolism , Lectins/genetics , Molecular Sequence Data , Molecular Weight , Osmeriformes/genetics , Ovum/metabolism , Protein Structure, Tertiary/genetics , Sequence Analysis, DNA
8.
Carbohydr Res ; 350: 49-54, 2012 Mar 01.
Article in English | MEDLINE | ID: mdl-22277540

ABSTRACT

For immunological experiments on glycogens, anti-glycogen antibodies are indispensable to capture, detect, and visualize sugar molecules. An anti-glycogen monoclonal antibody (IV58B6) and newly constructed antibody (ESG1A9mAb) have a common immunoglobulin type (IgM) and binding ability to glycogens, but overall possess different binding features. Therefore, they may prove useful for the construction of an advanced system of quantitative ELISA based on their molecular structures. For this purpose, detailed information on the carbohydrate-specificities of ESG1A9mAb and IV58B6 is first required, but their fine specificities for various types of glycogens have not been elucidated. To overcome this problem, we performed interaction analysis by ELISA of ESG1A9mAb and IV58B6 toward 15 glucose polymers, that is, 5 enzymatically-synthesized glycogens (ESGs), 6 natural source glycogens (NSGs), 3 enzymatically digested glycogens (EDGs), and soluble starch. To provide a more detailed analysis, we determined the association constants (K(a)) of the two antibodies toward these glycogens by surface plasmon resonance. The results indicated that the carbohydrate-binding properties toward NSGs of ESG1A9mAb and IV58B6 were similar, but markedly differed for ESGs and EDGs. ESG1A9mAb showed significant affinity for all the ESGs and NSGs tested, whereas IV58B6 had only slight affinity for ESGs, although the affinities were increased when the ESGs were enzymatically digested. This information should be helpful for the design of both in vitro and in vivo immunological assays.


Subject(s)
Antibodies, Monoclonal/immunology , Antibody Specificity , Enzyme-Linked Immunosorbent Assay/methods , Glycogen/immunology , Surface Plasmon Resonance/methods , Animals , Cattle , Glycogen/metabolism , Rabbits , alpha-Amylases/metabolism
9.
J Biol Chem ; 287(2): 871-8, 2012 Jan 06.
Article in English | MEDLINE | ID: mdl-22102286

ABSTRACT

Lentinan (LNT), a ß-glucan from the fruiting bodies of Lentinus edodes, is well known to have immunomodulatory activity. NO and TNF-α are associated with many inflammatory diseases. In this study, we investigated the effects of LNT extracted by sonication (LNT-S) on the NO and TNF-α production in LPS-stimulated murine RAW 264.7 macrophages. The results suggested that treatment with LNT-S not only resulted in the striking inhibition of TNF-α and NO production in LPS-activated macrophage RAW 264.7 cells, but also the protein expression of inducible NOS (iNOS) and the gene expression of iNOS mRNA and TNF-α mRNA. It is surprising that LNT-S enhanced LPS-induced NF-κB p65 nuclear translocation and NF-κB luciferase activity, but severely inhibited the phosphorylation of JNK1/2 and ERK1/2. The neutralizing antibodies of anti-Dectin-1 and anti-TLR2 hardly affected the inhibition of NO production. All of these results suggested that the suppression of LPS-induced NO and TNF-α production was at least partially attributable to the inhibition of JNK1/2 and ERK1/2 activation. This work discovered a promising molecule to control the diseases associated with overproduction of NO and TNF-α.


Subject(s)
Lentinula/chemistry , Lipopolysaccharides/pharmacology , Nitric Oxide/biosynthesis , Tumor Necrosis Factor-alpha/biosynthesis , beta-Glucans/pharmacology , Animals , Cell Line , Enzyme Activation/drug effects , Extracellular Signal-Regulated MAP Kinases/metabolism , Macrophages , Mice , Nitric Oxide Synthase Type II/metabolism , Phosphorylation/drug effects , Transcription Factor RelA/metabolism , beta-Glucans/chemistry
10.
J Agric Food Chem ; 59(16): 8985-93, 2011 Aug 24.
Article in English | MEDLINE | ID: mdl-21751816

ABSTRACT

Black soybean seed coat extract (BE) is a polyphenol-rich food material consisting of 9.2% cyanidin 3-glucoside, 6.2% catechins, 39.8% procyanidins, and others. This study demonstrated that BE ameliorated obesity and glucose intolerance by up-regulating uncoupling proteins (UCPs) and down-regulating inflammatory cytokines in C57BL/6 mice fed a control or high-fat diet containing BE for 14 weeks. BE suppressed fat accumulation in mesenteric adipose tissue, reduced the plasma glucose level, and enhanced insulin sensitivity in the high-fat diet-fed mice. The gene and protein expression levels of UCP-1 in brown adipose tissue and UCP-2 in white adipose tissue were up-regulated by BE. Moreover, the gene expression levels of major inflammatory cytokines, tumor necrosis factor-α and monocyte chemoattractant protein-1 were remarkably decreased by BE in white adipose tissue. BE is a beneficial food material for the prevention of obesity and diabetes by enhancing energy expenditure and suppressing inflammation.


Subject(s)
Cytokines/analysis , Glucose Intolerance/prevention & control , Glycine max/chemistry , Obesity/prevention & control , Plant Extracts/administration & dosage , Uncoupling Agents/analysis , Adipose Tissue, Brown/chemistry , Adipose Tissue, White/chemistry , Animals , Cytokines/genetics , Down-Regulation , Inflammation , Ion Channels/analysis , Ion Channels/genetics , Male , Mice , Mice, Inbred C57BL , Mitochondrial Proteins/analysis , Mitochondrial Proteins/genetics , Seeds/chemistry , Uncoupling Protein 1 , Uncoupling Protein 2 , Up-Regulation
11.
Biochim Biophys Acta ; 1810(7): 643-51, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21514365

ABSTRACT

BACKGROUND: Galectins form a large family of animal lectins, individual members having variously divergent carbohydrate-recognition domains (CRDs) responsible for extensive physiological phenomena. Sugar-binding affinities of galectins were previously investigated by us using frontal affinity chromatography (FAC) with a relatively small set (i.e., 41) of oligosaccharides. However, total understanding of a consensus rule for galectin-recognition saccharides is still hampered by the lack of fundamental knowledge about their sugar-binding specificity toward a much larger panel of oligosaccharides in terms of dissociation constant (K(d)). METHODS: In the present study, we extended a FAC analysis from a more systematic viewpoint by using 142 fluorescent-labeled oligosaccharides, initially with focus on functional human galectins-1-9. Binding characteristics were further validated with 11 non-human galectins and 13 non-galectin Gal/GalNAc-binding lectins belonging to different families. RESULTS: An empirical [Galß-equatorial] rule for galectin-recognition disaccharides was first derived by our present research and previous works by others. However, this rule was not valid for a recently reported nematode disaccharide, "Galß1-4-L-Fuc" [Butschi et al. PLoS Pathog, 2010; 6(1):e1000717], because this glycosidic linkage was directed to 'axial' 4-OH of L-Fuc. After careful reconsideration of the structural data, we reached an ultimate rule of galectin-recognition disaccharides, which all of the galectins so far identified fulfilled, i.e., under the re-defined configuration "Galß-(syn)-gauche". The rule also worked perfectly for differentiation of galectins from other types of lectins. GENERAL SIGNIFICANCE: The present attempt should provide a basis to solve the riddle of the glyco-code as well as to develop therapeutic inhibitors mimicking galectin ligands.


Subject(s)
Chromatography, Affinity/methods , Disaccharides/chemistry , Galectins/chemistry , Molecular Conformation , Binding Sites , Binding, Competitive , Chromatography, Affinity/instrumentation , Disaccharides/metabolism , Galectins/genetics , Galectins/metabolism , Humans , Molecular Structure , Oligosaccharides/chemistry , Protein Binding , Protein Isoforms/chemistry , Protein Isoforms/genetics , Protein Isoforms/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism
12.
J Biol Chem ; 286(12): 10305-15, 2011 Mar 25.
Article in English | MEDLINE | ID: mdl-21247895

ABSTRACT

CEL-IV is a C-type lectin isolated from a sea cucumber, Cucumaria echinata. This lectin is composed of four identical C-type carbohydrate-recognition domains (CRDs). X-ray crystallographic analysis of CEL-IV revealed that its tetrameric structure was stabilized by multiple interchain disulfide bonds among the subunits. Although CEL-IV has the EPN motif in its carbohydrate-binding sites, which is known to be characteristic of mannose binding C-type CRDs, it showed preferential binding of galactose and N-acetylgalactosamine. Structural analyses of CEL-IV-melibiose and CEL-IV-raffinose complexes revealed that their galactose residues were recognized in an inverted orientation compared with mannose binding C-type CRDs containing the EPN motif, by the aid of a stacking interaction with the side chain of Trp-79. Changes in the environment of Trp-79 induced by binding to galactose were detected by changes in the intrinsic fluorescence and UV absorption spectra of WT CEL-IV and its site-directed mutants. The binding specificity of CEL-IV toward complex oligosaccharides was analyzed by frontal affinity chromatography using various pyridylamino sugars, and the results indicate preferential binding to oligosaccharides containing Galß1-3/4(Fucα1-3/4)GlcNAc structures. These findings suggest that the specificity for oligosaccharides may be largely affected by interactions with amino acid residues in the binding site other than those determining the monosaccharide specificity.


Subject(s)
Cucumaria/chemistry , Lectins, C-Type/chemistry , Amino Acid Motifs , Animals , Binding Sites , Carbohydrates/chemistry , Crystallography, X-Ray , Protein Structure, Tertiary , Substrate Specificity/physiology
13.
Phytochemistry ; 71(5-6): 648-57, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20096904

ABSTRACT

Ingestion of the toxic mushroom Boletus venenatus causes a severe gastrointestinal syndrome, such as nausea, repetitive vomiting, diarrhea, and stomachache. A family of isolectins (B. venenatus lectins, BVLs) was isolated as the toxic principles from the mushroom by successive 80% ammonium sulfate-precipitation, Super Q anion-exchange chromatography, and TSK-gel G3000SW gel filtration. Although BVLs showed a single band on SDS-PAGE, they were further divided into eight isolectins (BVL-1 to -8) by BioAssist Q anion-exchange chromatography. All the isolectins showed lectin activity and had very similar molecular weights as detected by matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF-MS) analysis. Among them, BVL-1 and -3 were further characterized with their complete amino acid sequences of 99 amino acids determined and found to be identical to each other. In the hemagglutination inhibition assay, both proteins failed to bind to any mono- or oligo-saccharides tested and showed the same sugar-binding specificity to glycoproteins. Among the glycoproteins examined, asialo-fetuin was the strongest inhibitor. The sugar-binding specificity of each isolectin was also analyzed by using frontal affinity chromatography and surface plasmon resonance analysis, indicating that they recognized N-linked sugar chains, especially Galbeta1-->4GlcNAcbeta1-->4Manbeta1-->4GlcNAcbeta1-->4GlcNAc (Type II) residues in N-linked sugar chains. BVLs ingestion resulted in fatal toxicity in mice upon intraperitoneal administration and caused diarrhea upon oral administration in rats.


Subject(s)
Agaricales/chemistry , Lectins/isolation & purification , Plant Lectins/isolation & purification , Amino Acid Sequence , Animals , Asialoglycoproteins , Carbohydrates/chemistry , Diarrhea/chemically induced , Electrophoresis, Polyacrylamide Gel , Fetuins , Glycoproteins/chemistry , Lectins/chemistry , Lectins/toxicity , Mice , Mycotoxins/chemistry , Mycotoxins/isolation & purification , Mycotoxins/toxicity , Plant Lectins/chemistry , Plant Lectins/toxicity , Rats , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , alpha-Fetoproteins
14.
Biochem Biophys Res Commun ; 384(2): 204-9, 2009 Jun 26.
Article in English | MEDLINE | ID: mdl-19393618

ABSTRACT

Previously, we developed an alpha2-6-sialic acid (Sia)-specific lectin (SRC) starting from an R-type galactose-specific lectin C-terminal domain. However, it showed relatively low affinity because of its monovalency. Here, we engineered a tandem repeat construct (SRC2) showing substantial affinity for alpha2,6-sialylated N-glycans (in the order of 10(-6)M in K(d)), almost comparable to a natural alpha2-6Sia-specific lectin from Sambucus sieboldiana (SSA). Notably, its binding to branched N-glycans was found to be more selective than SSA. Nevertheless, SRC2 showed no apparent hemagglutinating activity, while it exerted strong erythrocyte-binding activity. This unique feature will help flow cytometry analysis, where usual lectins including SSA agglutinate cells. Some other biochemical properties investigated for SRC2, e.g., high productivity in bacteria and easy release of captured glycoproteins with lactose have demonstrated versatility of this mutant protein as a powerful tool for sialoglycomics.


Subject(s)
Lectins/metabolism , Plant Lectins/genetics , Plant Lectins/metabolism , Protein Engineering , Cell Line , Glycoproteins/chemistry , Glycoproteins/metabolism , Humans , Lectins/chemistry , Lectins/genetics , N-Acetylneuraminic Acid/chemistry , N-Acetylneuraminic Acid/metabolism , Plant Lectins/chemistry , Protein Binding , Sambucus/chemistry , Sambucus/metabolism , Tandem Repeat Sequences/genetics
15.
Biosci Biotechnol Biochem ; 73(4): 912-20, 2009 Apr 23.
Article in English | MEDLINE | ID: mdl-19352030

ABSTRACT

Small-sized isolectins (9 KDa) from Hypnea japonica belong to a new lectin family. Here, we describe the carbohydrate-binding properties of the three isolectins (hypninA1, A2, and A3) and the amino acid sequence of hypninA3 (P85888). In frontal affinity chromatography with about 100 pyridylaminated oligosaccharides, the isolectins, which had no affinity for monosaccharides, commonly bound only core (alpha1-6) fucosylated N-glycans, and did not the other oligosaccharides examined, including (alpha1-2), (alpha1-3), and (alpha1-4) fucosylated glycans. The specific binding of hypninA3 with the fucosylated N-glycans (Ka; 0.52-7.58 x 10(6) M(-1)) was confirmed by surface plasmon resonance analyses on an immobilized glycoprotein with and without core (alpha1-6) fucose. Such specificity of hypninA is clearly distinct from those of other known fucose-binding lectins, making it a valuable tool for cancer diagnosis and quality control of medicinal antibodies. HypninA3 is a polypeptide composed of 90 amino acids containing four half-cystines.


Subject(s)
Fucose/chemistry , Lectins/chemistry , Lectins/metabolism , Polysaccharides/chemistry , Polysaccharides/metabolism , Rhodophyta/chemistry , Amino Acid Sequence , Cystinuria , Glucose , Glycoproteins/chemistry , Glycoproteins/metabolism , Oligosaccharides/chemistry , Oligosaccharides/metabolism , Peptides/chemistry , Peptides/metabolism , Substrate Specificity
16.
J Agric Food Chem ; 57(7): 2896-902, 2009 Apr 08.
Article in English | MEDLINE | ID: mdl-19271711

ABSTRACT

The amino acid sequence of mannose-binding lectin, named DB1, from the yam (Dioscorea batatas, synonym Dioscorea polystachya) tubers was determined. The lectin was composed of two isoforms DB1(Cys86) and DB1(Leu86) consisting of 108 amino acid residues with 90% sequence homology between them. DB1 showed a high sequence similarity to snowdrop (Galanthus nivalis) bulb lectin, GNA; especially, the carbohydrate-binding sites of GNA were highly conserved in DB1. DB1 interacted with D-mannose residues of oligosaccharides, and the oligosaccharides carrying two mannose-alpha-1,3-D-mannose units showed high binding affinity. DB1 was examined for insecticidal activity against Helicoverpa armigera (Lepidoptera: Noctuidae) larvae at different stages of development. The rate of adults successfully emerging from pupae fed on DB1 was 33%, when incorporated into an artificial diet at a level of 0.01% (w/w). Although DB1 had no or marginal inhibitory effects on gut proteolytic and glycolic enzymes, the lectin strongly bound to larval brush border and peritrophic membrane detected by immunostaining. The results show that DB1 may fulfill a defense role against insect pests.


Subject(s)
Dioscorea/chemistry , Insecticides , Lepidoptera , Mannose-Binding Lectin/chemistry , Mannose-Binding Lectin/metabolism , Plant Tubers/chemistry , Amino Acid Sequence , Animals , Base Sequence , Binding Sites , DNA, Complementary/chemistry , Insecticides/chemistry , Insecticides/metabolism , Larva/growth & development , Larva/metabolism , Lepidoptera/enzymology , Lepidoptera/growth & development , Lepidoptera/metabolism , Mannose-Binding Lectin/isolation & purification , Molecular Sequence Data , Oligosaccharides/metabolism
17.
Glycobiology ; 19(5): 527-36, 2009 May.
Article in English | MEDLINE | ID: mdl-19218400

ABSTRACT

Lens culinaris lectin (LCA) is a useful probe for the detection in serum of a core-fucosylated alpha-fetoprotein, called AFP-L3 fraction, which is a well-known marker for the diagnosis and prognosis of hepatocellular carcinoma. Here we performed a systematic quantitative interaction analysis of LCA and its close homolog, Pisum sativum lectin (PSA), by frontal affinity chromatography with 143 pyridylaminated (PA) glycans including a series of core-fucosylated glycans. Both lectins showed binding affinity to core-fucosylated, mono- and bi-antennary N-glycans, but not to their tri- and tetra-antennary forms, indicating that the addition of the GlcNAc residue at the N-acetylglucosaminyltransferase IV position abrogates the binding affinity. However, their specificities are distinguishable: while LCA showed the highest affinity to the core-fucosylated, agalactosylated, bi-antennary N-glycan (K(a)=1.1 x 10(5) M(-1)), PSA showed the highest affinity to the core-fucosylated, trimannosyl structure (K(a)=1.2 x 10(5) M(-1)). Glycan-binding specificities of LCA and PSA were also analyzed by glycoconjugate microarray compared to other core-fucose-binding lectins from Aspergillus oryzae (AOL) and Aleuria auratia (AAL). LCA and PSA bound specifically to core fucose, whereas AOL and AAL exhibited broad specificity to fucosylated glycans. These results explain why LCA is appropriate as a specific probe for AFP-L3, which mainly contains a core-fucosylated, biantennary N-glycan, but not its highly branched forms.


Subject(s)
Lens Plant/metabolism , Pisum sativum/metabolism , Plant Lectins/metabolism , Binding Sites , Cell Line , Chromatography, Affinity , Fucose/chemistry , Fucose/metabolism , Humans , Microarray Analysis , N-Acetylglucosaminyltransferases/metabolism , Plant Lectins/chemistry , Polysaccharides/chemistry , Polysaccharides/metabolism , alpha-Fetoproteins/metabolism
18.
Anal Biochem ; 386(2): 217-21, 2009 Mar 15.
Article in English | MEDLINE | ID: mdl-19109923

ABSTRACT

Aleuria aurantia lectin (AAL) is widely used to estimate the extent of alpha1,6-fucosylated oligosaccharides and to fractionate glycoproteins for the detection of specific biomarkers for developmental antigens. Our previous studies have shown that Aspergillus oryzae lectin (AOL) reflects the extent of alpha1,6-fucosylation more clearly than AAL. However, the subtle specificities of these lectins to fucose linked to oligosaccharides through the 2-, 3-, 4-, or 6-position remain unclear, because large amounts of oligosaccharides are required for the systematic comparative analysis using surface plasmon resonance. Here we show a direct comparison of the dissociation constants (K(d)) of AOL and AAL using 113 pyridylaminated oligosaccharides with frontal affinity chromatography. As a result, AOL showed a similar specificity as AAL in terms of the high affinity for alpha1,6-fucosylated oligosaccharides, for smaller fucosylated oligosaccharides, and for oligosaccharides fucosylated at the reducing terminal core GlcNAc. On the other hand, AOL showed 2.9-6.2 times higher affinity constants (K(a)) for alpha1,6-fucosylated oligosaccharides than AAL and only AAL additionally recognized oligosaccharides which were alpha1,3-fucosylated at the reducing terminal GlcNAc. These results explain why AOL reflects the extent of alpha1,6-fucosylation on glycoproteins more clearly than AAL. This systematic comparative analysis made from a quantitative viewpoint enabled a clear physical interpretation of these fucose-specific lectins with multivalent fucose-binding sites.


Subject(s)
Ascomycota/metabolism , Aspergillus oryzae/metabolism , Chromatography, Affinity/methods , Lectins/chemistry , Oligosaccharides/chemistry , Binding Sites , Kinetics , Lectins/metabolism , Oligosaccharides/metabolism , Substrate Specificity
19.
Dev Comp Immunol ; 33(2): 187-97, 2009 Feb.
Article in English | MEDLINE | ID: mdl-18809432

ABSTRACT

L-rhamnose-binding lectins (RBLs) have been isolated from various kinds of fish and invertebrates and interact with various kinds of bacteria, suggesting RBLs are involved in various inflammatory reactions. We investigated the effect of RBLs from chum salmon (Oncorhynchus keta), named CSL1, 2 and 3, on the peritoneal macrophage cell line from rainbow trout (Oncorhynchus mykiss) (RTM5) and an established fibroblastic-like cell line derived from gonadal tissue of rainbow trout (RTG-2). CSLs were bound to the surface of RTM5 and RTG-2 cells and induced proinflammatory cytokines, including IL-1beta1, IL-1beta2, TNF-alpha1, TNF-alpha2 and IL-8 in both cells by recognizing globotriaosylceramide (Gb3). In addition, CSLs had an opsonic effect on RTM5 cells and this effect was significantly inhibited by L-rhamnose, indicating that CSLs enhanced their phagocytosis by binding to Gb3 on cell surfaces. This is the first finding that Gb3 plays a role in innate immunity by cooperating with natural ligands, RBLs.


Subject(s)
Antigens, Tumor-Associated, Carbohydrate/immunology , Immunity, Innate/drug effects , Immunity, Innate/immunology , Lectins/metabolism , Lectins/pharmacology , Rhamnose/metabolism , Animals , Antibodies/immunology , Antigens, Tumor-Associated, Carbohydrate/metabolism , Cell Line , Cell Membrane/immunology , Cell Membrane/metabolism , Cytokines/genetics , Cytokines/immunology , Gene Expression Regulation/genetics , Gene Expression Regulation/immunology , Oncorhynchus keta/genetics , Oncorhynchus keta/immunology , Oncorhynchus keta/metabolism , Oncorhynchus mykiss/genetics , Oncorhynchus mykiss/immunology , Oncorhynchus mykiss/metabolism , Phagocytes , Protein Binding , Substrate Specificity
20.
J Biochem ; 143(6): 833-9, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18344541

ABSTRACT

To obtain lectins without tedious purification steps, we developed a convenient method for a one-step purification of lectins using sugar-immobilized gold nano-particles (SGNPs). Proteins in crude extracts from plant materials were precipitated with 60% ammonium sulphate, and the precipitate was re-dissolved in a small volume of phosphate buffer. The resultant solution was then mixed with appropriate SGNPs under an optimized condition. After incubating overnight at 4 degrees C, lectins in the mixture formed aggregate with SGNPs, which was visually detected and easily sedimented by centrifugation. The aggregate was dissolved by adding inhibitory sugars, which were identical to the non-reducing sugar moieties on the SGNPs. According to SDS-PAGE and MS of thus obtained proteins, it was found that SGNPs isolated lectins with a high purity. For example, a protein isolated from banana using Glcalpha-GNP (alpha-glucose-immobilized gold nano-particle) was identified as banana lectin by trypsin-digested peptide-MS finger printing method.


Subject(s)
Carbohydrates/chemistry , Gold Colloid/chemistry , Lectins/isolation & purification , Musa/metabolism , Nanoparticles , Lectins/chemistry , Lectins/pharmacology , Musa/chemistry , Peptide Fragments , Plant Extracts/pharmacology , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
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