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1.
Phys Rev Lett ; 132(11): 118202, 2024 Mar 15.
Article in English | MEDLINE | ID: mdl-38563948

ABSTRACT

Using a statistical mechanical model and numerical simulations, we provide the design principle for the bridging strength (ξ) and linker density (ρ) dependent superselectivity in linker-mediated multivalent nanoparticle adsorption. When the bridges are insufficient, the formation of multiple bridges leads to both ξ- and ρ-dependent superselectivity. When the bridges are excessive, the system becomes insensitive to bridging strength due to entropy-induced self-saturation and shows a superselective desorption with respect to the linker density. Counterintuitively, lower linker density or stronger bridging strength enhances the superselectivity. These findings help the understanding of relevant biological processes and open up opportunities for applications in biosensing, drug delivery, and programmable self-assembly.

2.
J Chem Phys ; 160(6)2024 Feb 14.
Article in English | MEDLINE | ID: mdl-38341787

ABSTRACT

Materials incorporating covalent adaptive networks (CAN), e.g., vitrimers, have received significant scientific attention due to their distinctive attributes of self-healing and stimuli-responsive properties. Different from direct crosslinked systems, bivalent and multivalent systems require a bond swap algorithm that respects detailed balance, considering the multiple equilibria in the system. Here, we propose a simple and robust algorithm to handle bond swap in multivalent and multi-species CAN systems. By including a bias term in the acceptance of Monte Carlo moves, we eliminate the imbalance from the bond swap site selection and multivalency effects, ensuring the detailed balance for all species in the system.

3.
Soft Matter ; 20(5): 1114-1119, 2024 Jan 31.
Article in English | MEDLINE | ID: mdl-38224143

ABSTRACT

Kirigami-inspired designs can enable self-folding three-dimensional materials from flat, two-dimensional sheets. Hierarchical designs of connected levels increase the diversity of possible target structures, yet they can lead to longer folding times in the presence of fluctuations. Here, we study the effect of rotational coupling between levels on the self-folding of two-level kirigami designs driven by thermal noise in a fluid. Naturally present due to hydrodynamic resistance, we find that this coupling parameter can significantly impact a structure's self-folding pathway, thus enabling us to assess the quality of a kirigami design and the possibility for its optimization in terms of its folding rate and yield.

4.
Phys Rev Lett ; 132(1): 018202, 2024 Jan 05.
Article in English | MEDLINE | ID: mdl-38242650

ABSTRACT

A simple geometric constraint often leads to novel, complex crystalline phases distinct from the bulk. Using thin-film charge colloidal crystals, a model system with tunable interactions, we study the effects of geometric constraints. Through a combination of experiments and simulations, we systematically explore phase reentrances and solid deformation modes concerning geometrical confinement strength, identifying two distinct categories of phase reentrances below a characteristic layer number, N_{c}: one for bcc bulk-stable and another for fcc bulk-stable systems. We further verify that the dominant thermodynamic origin is the nonmonotonic dependence of solids' free energy on the degree of spatial confinement. Moreover, we discover transitions in solid deformation modes between interface-energy and bulk-energy dominance: below a specific layer number, N_{k}, geometric constraints generate unique soft deformation modes adaptive to confinement. These findings on the N-dependent thermodynamic and kinetic behaviors offer fresh insights into understanding and manipulating thin-film crystal structures.

5.
Nat Commun ; 14(1): 8494, 2023 Dec 21.
Article in English | MEDLINE | ID: mdl-38129397

ABSTRACT

Janus particles, which have an attractive patch on the otherwise repulsive surface, have been commonly employed for anisotropic colloidal assembly. While current methods of particle synthesis allow for control over the patch size, they are generally limited to producing dome-shaped patches with a high symmetry (C∞). Here, we report on the synthesis of Janus particles with patches of various tunable shapes, having reduced symmetries ranging from C2v to C3v and C4v. The Janus particles are synthesized by partial encapsulation of an octahedral metal-organic framework particle (UiO-66) in a polymer matrix. The extent of encapsulation is precisely regulated by a stepwise, asymmetric dewetting process that exposes selected facets of the UiO-66 particle. With depletion interaction, the Janus particles spontaneously assemble into colloidal clusters reflecting the particles' shapes and patch symmetries. We observe the formation of chiral structures, whereby chirality emerges from achiral building blocks. With the ability to encode symmetry and directional bonding information, our strategy could give access to more complex colloidal superstructures through assembly.

6.
Proc Natl Acad Sci U S A ; 120(48): e2312866120, 2023 Nov 28.
Article in English | MEDLINE | ID: mdl-37988461

ABSTRACT

All phase transitions can be categorized into two different types: continuous and discontinuous phase transitions. Discontinuous phase transitions are normally accompanied with significant structural changes, and nearly all of them have the kinetic pathway of nucleation and growth, if the system does not suffer from glassy dynamics. Here, in a system of barrier-controlled reactive particles, we find that the discontinuous freezing transition of a nonequilibrium hyperuniform fluid into an absorbing state does not have the kinetic pathway of nucleation and growth, and the transition is triggered by long-wavelength fluctuations. The transition rate decreases with increasing the system size, which suggests that the metastable hyperuniform fluid could be kinetically stable in an infinitely large system. This challenges the common understanding of metastability in discontinuous phase transitions. Moreover, we find that the "metastable yet kinetically stable" hyperuniform fluid features a scaling in the structure factor [Formula: see text] in 2D, which is the third dynamic hyperuniform state in addition to the critical hyperuniform state with [Formula: see text] and the nonequilibrium hyperuniform fluid with [Formula: see text].

7.
J Chem Phys ; 159(8)2023 Aug 28.
Article in English | MEDLINE | ID: mdl-37606337

ABSTRACT

Randomly organizing hyperuniform fluid induced by reciprocal activation is a non-equilibrium fluid with vanishing density fluctuations at large length scales such as crystals. Here, we extend this new state of matter to a closed manifold, namely a spherical surface. We find that the random organization on a spherical surface behaves similar to that in two dimensional Euclidean space, and the absorbing transition on a sphere also belongs to the conserved directed percolation universality class. Moreover, the reciprocal activation can also induce a non-equilibrium hyperuniform fluid on a sphere. The spherical structure factor at the absorbing transition and the non-equilibrium hyperuniform fluid phases are scaled as S(l → 0) ∼ (l/R)0.45 and S(l → 0) ∼ l(l + 1)/R2, respectively, which are both hyperuniform according to the definition of hyperuniformity on a sphere with l, the wave number, and R, the radius of the spherical surface. We also consider the impact of inertia in realistic hyperuniform fluids, and it is found only by adding an extra length-scale, above which hyperuniform scaling appears. Our finding suggests a new method for creating non-equilibrium hyperuniform fluids on closed manifolds to avoid boundary effects.

8.
JACS Au ; 3(5): 1385-1391, 2023 May 22.
Article in English | MEDLINE | ID: mdl-37234107

ABSTRACT

Multivalency is prevalent in various biological systems and applications due to the superselectivity that arises from the cooperativity of multivalent binding. Traditionally, it was thought that weaker individual binding would improve the selectivity in multivalent targeting. Here, using analytical mean field theory and Monte Carlo simulations, we discover that, for receptors that are highly uniformly distributed, the highest selectivity occurs at an intermediate binding energy and can be significantly greater than the weak binding limit. This is caused by an exponential relationship between the bound fraction and receptor concentration, which is influenced by both the strength and combinatorial entropy of binding. Our findings not only provide new guidelines for the rational design of biosensors using multivalent nanoparticles but also introduce a new perspective in understanding biological processes involving multivalency.

9.
Small Methods ; 7(9): e2300383, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37183306

ABSTRACT

The shape-dictated self-assembly of hybrid colloids induced by chemical concentration gradients generated by photocatalytic reactions of the colloids is studied. Different shapes enable the formation of assemblies with distinct lattice structures including hexagons, distorted hexagons, and squares, which are corroborated by computer simulations. Furthermore, assemblies change from lattices to chains when increasing the attraction between the colloids. The results show that photoresponsive hybrid colloids possess a unique capability for shape-dependent self-assembly, offering a practical and versatile approach to manipulate self-assembly at the microscale.

10.
Front Biosci (Landmark Ed) ; 28(12): 361, 2023 12 29.
Article in English | MEDLINE | ID: mdl-38179740

ABSTRACT

Pancreatic cancer is the seventh leading cause of cancer-related deaths, and chemotherapy is one of the most important treatments for pancreatic cancer. Unfortunately, pancreatic cancer cells can block chemotherapy drugs from entering the tumor. This is owing to interactions between the tumor's environment and the cancer cells. Here, we review the latest research on the mechanisms by which pancreatic cancer cells block the chemotherapy drug, gemcitabine. The results of our review can help identify potential therapeutic targets for the blocking of gemcitabine by pancreatic cancer cells and may provide new strategies to help chemotherapy drugs penetrate tumors.


Subject(s)
Carcinoma, Pancreatic Ductal , Pancreatic Neoplasms , Humans , Gemcitabine , Deoxycytidine/pharmacology , Deoxycytidine/therapeutic use , Drug Resistance, Neoplasm , Carcinoma, Pancreatic Ductal/drug therapy , Carcinoma, Pancreatic Ductal/pathology , Pancreatic Neoplasms/drug therapy , Pancreatic Neoplasms/pathology , Cell Line, Tumor
11.
JACS Au ; 2(10): 2359-2366, 2022 Oct 24.
Article in English | MEDLINE | ID: mdl-36311840

ABSTRACT

Thermo-gelling polymers have been envisioned as promising smart biomaterials but limited by their weak mechanical and thermodynamic stabilities. Here, we propose a new thermo-gelling vitrimer, which remains at a liquid state because of the addition of protector molecules preventing the crosslinking, and with increasing temperature, an entropy-driven crosslinking occurs to induce the sol-gel transition. Moreover, we find that the activation barrier in the metathesis reaction of vitrimers plays an important role, and experimentally, one can use catalysts to tune the activation barrier to drive the vitrimer to form an equilibrium gel at high temperature, which is not subject to any thermodynamic instability. We formulate a mean-field theory to describe the entropy-driven crosslinking of the vitrimer, which agrees quantitatively with computer simulations and paves the way for the design and fabrication of novel vitrimers for biomedical applications.

12.
Phys Rev Lett ; 129(12): 125501, 2022 Sep 16.
Article in English | MEDLINE | ID: mdl-36179189

ABSTRACT

Recently, a new type of duality was reported in some deformable mechanical networks that exhibit Kramers-like degeneracy in phononic spectrum at the self-dual point. In this work, we clarify the origin of this duality and propose a design principle of 2D self-dual structures with arbitrary complexity. We find that this duality originates from the partial central inversion (PCI) symmetry of the hinge, which belongs to a more general end-fixed scaling transformation. This symmetry gives the structure an extra degree of freedom without modifying its dynamics. This results in dynamic isomers, i.e., dissimilar 2D mechanical structures, either periodic or aperiodic, having identical dynamic modes, based on which we demonstrate a new type of wave guide without reflection or loss. Moreover, the PCI symmetry allows us to design various 2D periodic isostatic networks with hinge duality. At last, by further studying a 2D nonmechanical magnonic system, we show that the duality and the associated hidden symmetry should exist in a broad range of Hamiltonian systems.

13.
Phys Rev E ; 106(1): L012601, 2022 Jul.
Article in English | MEDLINE | ID: mdl-35974520

ABSTRACT

In living and engineered systems of active particles, self-propulsion induces an unjamming transition from a solid to a fluid phase and phase separation between a gas and a liquidlike phase. We demonstrate an interplay between these two nonequilibrium transitions in systems of persistent active particles. The coexistence and jamming lines in the activity-density plane meet at the jamming transition point in the limit of hard particles or zero activity. This interplay induces an anomalous dynamic in the liquid phase and hysteresis at the active jamming transition.

14.
Sci Adv ; 8(26): eabq0969, 2022 Jul.
Article in English | MEDLINE | ID: mdl-35776790

ABSTRACT

The ordered coassembly of mixed-dimensional species-such as zero-dimensional (0D) nanocrystals and 2D microscale nanosheets-is commonly deemed impracticable, as phase separation almost invariably occurs. Here, by manipulating the ligand grafting density, we achieve ordered coassembly of 0D nanocrystals and 2D nanosheets under standard solvent evaporation conditions, resulting in macroscopic, freestanding hybrid-dimensional superlattices with both out-of-plane and in-plane order. The key to suppressing the notorious phase separation lies in hydrophobizing nanosheets with molecular ligands identical to those of nanocrystals but having substantially lower grafting density. The mismatched ligand density endows the two mixed-dimensional components with a molecular recognition-like capability, driving the spontaneous organization of densely capped nanocrystals at the interlayers of sparsely grafted nanosheets. Theoretical calculations reveal that the intercalation of nanocrystals can substantially reduce the short-range repulsions of ligand-grafted nanosheets and is therefore energetically favorable, while subsequent ligand-ligand van der Waals attractions induce the in-plane order and kinetically stabilize the laminate superlattice structure.

15.
BMC Cancer ; 22(1): 382, 2022 Apr 09.
Article in English | MEDLINE | ID: mdl-35397524

ABSTRACT

BACKGROUND: The accuracy of CT and tumour markers in screening lung cancer needs to be improved. Computer-aided diagnosis has been reported to effectively improve the diagnostic accuracy of imaging data, and recent studies have shown that circulating genetically abnormal cell (CAC) has the potential to become a novel marker of lung cancer. The purpose of this research is explore new ways of lung cancer screening. METHODS: From May 2020 to April 2021, patients with pulmonary nodules who had received CAC examination within one week before surgery or biopsy at First Affiliated Hospital of Zhengzhou University were enrolled. CAC counts, CT scan images, serum tumour marker (CEA, CYFRA21-1, NSE) levels and demographic characteristics of the patients were collected for analysis. CT were uploaded to the Pulmonary Nodules Artificial Intelligence Diagnostic System (PNAIDS) to assess the malignancy probability of nodules. We compared diagnosis based on PNAIDS, CAC, Mayo Clinic Model, tumour markers alone and their combination. The combination models were built through logistic regression, and was compared through the area under (AUC) the ROC curve. RESULTS: A total of 93 of 111 patients were included. The AUC of PNAIDS was 0.696, which increased to 0.847 when combined with CAC. The sensitivity (SE), specificity (SP), and positive (PPV) and negative (NPV) predictive values of the combined model were 61.0%, 94.1%, 94.7% and 58.2%, respectively. In addition, we evaluated the diagnostic value of CAC, which showed an AUC of 0.779, an SE of 76.3%, an SP of 64.7%, a PPV of 78.9%, and an NPV of 61.1%, higher than those of any single serum tumour marker and Mayo Clinic Model. The combination of PNAIDS and CAC exhibited significantly higher AUC values than the PNAIDS (P = 0.009) or the CAC (P = 0.047) indicator alone. However, including additional tumour markers did not significantly alter the performance of CAC and PNAIDS. CONCLUSIONS: CAC had a higher diagnostic value than traditional tumour markers in early-stage lung cancer and a supportive value for PNAIDS in the diagnosis of cancer based on lung nodules. The results of this study offer a new mode of screening for early-stage lung cancer using lung nodules.


Subject(s)
Lung Neoplasms , Multiple Pulmonary Nodules , Solitary Pulmonary Nodule , Antigens, Neoplasm , Artificial Intelligence , Biomarkers, Tumor , Early Detection of Cancer/methods , Humans , Keratin-19 , Lung Neoplasms/diagnostic imaging , Lung Neoplasms/genetics , Multiple Pulmonary Nodules/diagnostic imaging , Solitary Pulmonary Nodule/diagnostic imaging , Tomography, X-Ray Computed/methods
16.
J Chem Phys ; 156(2): 021102, 2022 Jan 14.
Article in English | MEDLINE | ID: mdl-35032980

ABSTRACT

One of the most intriguing phenomena in active matter has been the gas-liquid-like motility-induced phase separation (MIPS) observed in repulsive active particles. However, experimentally, no particle can be a perfect sphere, and the asymmetric shape, mass distribution, or catalysis coating can induce an active torque on the particle, which makes it a chiral active particle. Here, using computer simulations and dynamic mean-field theory, we demonstrate that the large enough torque of circle active Brownian particles in two dimensions generates a dynamical clustering state interrupting the conventional MIPS. Multiple clusters arise from the combination of the conventional MIPS cohesion, and the circulating current caused disintegration. The nonvanishing current in non-equilibrium steady states microscopically originates from the motility "relieved" by automatic rotation, which breaks the detailed balance at the continuum level. This suggests that no equilibrium-like phase separation theory can be constructed for chiral active colloids even with tiny active torque, in which no visible collective motion exists. This mechanism also sheds light on the understanding of dynamic clusters observed in a variety of active matter systems.

17.
Soft Matter ; 17(33): 7708-7713, 2021 Sep 07.
Article in English | MEDLINE | ID: mdl-34351349

ABSTRACT

We demonstrate the existence of unconventional rheological and memory properties in systems of soft-deformable particles whose energy depends on their shape, via numerical simulations. At large strains, these systems experience an unconventional shear weakening transition characterized by an increase in the mechanical energy and a drastic drop in shear stress, which stems from the emergence of short-ranged tetratic order. In these weakened states, the contact network evolves reversibly under strain reversal, keeping memory of its initial state, while the microscopic dynamics is irreversible.

18.
Phys Rev Lett ; 127(1): 018001, 2021 Jul 02.
Article in English | MEDLINE | ID: mdl-34270286

ABSTRACT

Self-dual structures whose dual counterparts are themselves possess unique hidden symmetry, beyond the description of classical spatial symmetry groups. Here we propose a strategy based on a nematic monolayer of attractive half-cylindrical colloids to self-assemble these exotic structures. This system can be seen as a 2D system of semidisks. By using Monte Carlo simulations, we discover two isostatic self-dual crystals, i.e., an unreported crystal with pmg space-group symmetry and the twisted kagome crystal. For the pmg crystal approaching the critical point, we find the double degeneracy of the full phononic spectrum at the self-dual point and the merging of two tilted Weyl nodes into one critically tilted Dirac node. The latter is "accidentally" located on the high-symmetry line. The formation of this unconventional Dirac node is due to the emergence of the critical flatbands at the self-dual point, which are linear combinations of "finite-frequency" floppy modes. These modes can be understood as mechanically coupled self-dual rhombus chains vibrating in some unique uncoupled ways. Our work paves the way for designing and fabricating self-dual materials with exotic mechanical or phononic properties.

19.
Phys Rev E ; 103(5-1): 052607, 2021 May.
Article in English | MEDLINE | ID: mdl-34134288

ABSTRACT

Nonequilibrium critical phenomena generally exist in many dynamic systems, like chemical reactions and some driven-dissipative reactive particle systems. Here, by using computer simulation and theoretical analysis, we demonstrate the crucial role of the activation barrier on the criticality of dynamic phase transitions in a minimal reactive hard-sphere model. We find that at zero thermal noise, with increasing the activation barrier, the type of transition changes from a continuous conserved directed percolation into a discontinuous dynamic transition by crossing a tricritical point. A mean-field theory combined with field simulation is proposed to explain this phenomenon. The possibility of Ising-type criticality in the nonequilibrium system at finite thermal noise is also discussed.

20.
Sci Adv ; 7(3)2021 Jan.
Article in English | MEDLINE | ID: mdl-33523902

ABSTRACT

Critical-like behaviors have been found in translational degrees of freedom near the glass transition of spherical particle systems mainly with local polycrystalline structures, but it is not clear if criticality exists in more general glassy systems composed of nonspherical particles without crystalline structures. Here, through experiments and simulations, we show critical-like behaviors in both translational and rotational degrees of freedom in monolayers of monodisperse colloidal ellipsoids in the absence of crystalline orders. We find rich features of the Ising-like criticality in structure and slow dynamics at the ideal glass transition point ϕ0, showing the thermodynamic nature of glass transition at ϕ0 A dynamic criticality is found at the mode-coupling critical point ϕc for the fast-moving clusters whose critical exponents increase linearly with fragility, reflecting a dynamic glass transition. These results cast light on the glass transition and explain the mystery that the dynamic correlation lengths diverge at two different temperatures.

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