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2.
Sci Rep ; 12(1): 10921, 2022 Jun 30.
Article in English | MEDLINE | ID: mdl-35773286

ABSTRACT

Magnetic reconnection is a universal process in space, astrophysical, and laboratory plasmas. It alters magnetic field topology and results in energy release to the plasma. Here we report the experimental results of a pure electron outflow in magnetic reconnection, which is not accompanied with ion flows. By controlling an applied magnetic field in a laser produced plasma, we have constructed an experiment that magnetizes the electrons but not the ions. This allows us to isolate the electron dynamics from the ions. Collective Thomson scattering measurements reveal the electron Alfvénic outflow without ion outflow. The resultant plasmoid and whistler waves are observed with the magnetic induction probe measurements. We observe the unique features of electron-scale magnetic reconnection simultaneously in laser produced plasmas, including global structures, local plasma parameters, magnetic field, and waves.

3.
Phys Rev E ; 105(2-2): 025203, 2022 Feb.
Article in English | MEDLINE | ID: mdl-35291161

ABSTRACT

We present an experimental method to generate quasiperpendicular supercritical magnetized collisionless shocks. In our experiment, ambient nitrogen (N) plasma is at rest and well magnetized, and it has uniform mass density. The plasma is pushed by laser-driven ablation aluminum (Al) plasma. Streaked optical pyrometry and spatially resolved laser collective Thomson scattering clarify structures of plasma density and temperatures, which are compared with one-dimensional particle-in-cell simulations. It is indicated that just after the laser irradiation, the Al plasma is magnetized by a self-generated Biermann battery field, and the plasma slaps the incident N plasma. The compressed external field in the N plasma reflects N ions, leading to counterstreaming magnetized N flows. Namely, we identify the edge of the reflected N ions. Such interacting plasmas form a magnetized collisionless shock.

4.
Sci Rep ; 12(1): 2346, 2022 Feb 16.
Article in English | MEDLINE | ID: mdl-35173182

ABSTRACT

Graphene is known as an atomically thin, transparent, highly electrically and thermally conductive, light-weight, and the strongest 2D material. We investigate disruptive application of graphene as a target of laser-driven ion acceleration. We develop large-area suspended graphene (LSG) and by transferring graphene layer by layer we control the thickness with precision down to a single atomic layer. Direct irradiations of the LSG targets generate MeV protons and carbons from sub-relativistic to relativistic laser intensities from low contrast to high contrast conditions without plasma mirror, evidently showing the durability of graphene.

5.
Carbohydr Polym ; 194: 111-121, 2018 Aug 15.
Article in English | MEDLINE | ID: mdl-29801818

ABSTRACT

The design and structural optimisation of a novel polysaccharide-based nanomaterial for the controlled and sustained release of doxorubicin are here reported. A cross-linked polymer was obtained by reacting a tetraglucose, named cyclic nigerosyl-1-6-nigerose (CNN), with pyromellitic dianhydride. The cross-linking reaction formed solid nanoparticles, named nanosponges, able to swell as a function of the pH. Nanoparticle sizes were reduced using High Pressure Homogenization, to obtain uniform nanosuspensions. Doxorubicin was incorporated into the CNN-nanosponges in a good extent. DSC and solid state NMR analyses proved the drug interaction with the polymer matrix. In vitro studies demonstrated pH-dependent slow and prolonged release kinetics of the drug from the nanoformulation. Doxorubicin-loaded CNN-nanosponges were easily internalized in A2780 cell line. They might considered an intracellular doxorubicin reservoir, able to slowly release the drug over time. CNN-nanosponges may be promising biocompatible nanocarriers for the sustained delivery of doxorubicin with potential localised application in cancer treatments.


Subject(s)
Antibiotics, Antineoplastic/pharmacology , Disaccharidases/chemistry , Doxorubicin/pharmacology , Nanostructures/chemistry , Antibiotics, Antineoplastic/chemistry , Benzoates/chemistry , Cell Line, Tumor , Cell Proliferation/drug effects , Cell Survival/drug effects , Cross-Linking Reagents/chemistry , Dose-Response Relationship, Drug , Doxorubicin/chemistry , Drug Carriers/chemistry , Drug Screening Assays, Antitumor , Humans , Hydrogen-Ion Concentration , Particle Size , Structure-Activity Relationship , Surface Properties , Time Factors
6.
Cell Mol Biol (Noisy-le-grand) ; 62(12): 74-78, 2016 Oct 31.
Article in English | MEDLINE | ID: mdl-27894404

ABSTRACT

Streptozotocin (STZ), a naturally occurring chemical, is toxic to the various kinds of cells such as insulin-producing beta cells. However, the beneficial effect of STZ on neuronal cells such as neurite outgrowth-inducing activity has been unknown. In this study, we examined the effect of STZ on neurite outgrowth in mouse neuronal Neuro2a cells. STZ (0.01 mM~5 mM) exerted remarkable neurite outgrowth-inducing activity in Neuro2a cells in a concentration dependent manner. STZ also had the same neurite outgrowth-inducing activity as that of retinoic acid (RA), which is well known neurite outgrowth inducer. As with the result of RA treatment, STZ administration increased MAP2-positive cells. The MAP2-positive cells reflect neurite outgrowth-induced cells. STZ (0.01 mM~5 mM) did not induce cell death, but significantly decreased cell proliferation. The serine/threonine kinase Akt, a downstream target of phosphatidylinositol-3 kinase (PI3K), was transiently phosphorylated at Ser473 and at Thr303 by STZ (5 mM) administration. Glycogen synthase kinase 3ß (GSK3ß), which has been reported to be inactivated by Akt, was also transiently phosphorylated at Ser9 by STZ (5 mM) administration. In addition, a blocker of PI3K, LY294002 (10 µM), significantly attenuated STZ-induced neurite outgrowth. These results suggest that STZ induces neurite outgrowth via activation of PI3K-Akt signaling pathway and GSK3ß inhibition.


Subject(s)
Glycogen Synthase Kinase 3 beta/metabolism , Neuronal Outgrowth/drug effects , Phosphatidylinositol 3-Kinases/metabolism , Proto-Oncogene Proteins c-akt/metabolism , Signal Transduction/drug effects , Streptozocin/pharmacology , Animals , Apoptosis/drug effects , Cell Line, Tumor , Cell Proliferation/drug effects , Chromones/pharmacology , Immunoblotting , Mice , Morpholines/pharmacology , Neurons/cytology , Neurons/drug effects , Neurons/metabolism , Phosphoinositide-3 Kinase Inhibitors , Phosphorylation/drug effects
8.
Clin Exp Rheumatol ; 32(2): 211-7, 2014.
Article in English | MEDLINE | ID: mdl-24321457

ABSTRACT

OBJECTIVES: Recent genome-wide association studies disclosed that several single nucleotide polymorphisms (SNPs), including tumour necrosis factor (TNF) receptor-associated factor 1 (TRAF1) (+16860A/G), are associated with the pathophysiology of rheumatoid arthritis (RA). We assessed the usefulness of TRAF1 genotyping as a genetic predictor of the response to anti-TNF treatment in Japanese RA patients. METHODS: TRAF1 (+16860A/G) was genotyped using the TaqMan SNP genotyping assay in 101 Japanese RA patients treated with anti-TNF drugs for >24 weeks. We retrospectively analysed the association between SNP and the clinical response to treatment. TRAF1 mRNA and protein expression was also evaluated in CD4+, CD8+, CD14+, or CD19+ cells from 25 healthy subjects using quantitative polymerase chain reaction and intracellular staining flow cytometry, respectively. RESULTS: No statistical difference in DAS28-ESR at baseline was observed between the patient groups with the AA, AG, or GG genotype. The GG genotype was more frequent in non-responders than in good or moderate responders [odds ratio (OR) 7.4, 95% confidence interval (CI) 1.5-37.5]. The non-responders possessed the G allele more frequently than the good or moderate responders (OR 3.5, 95% CI 1.4-9.0). TRAF1 protein expression increased significantly in CD14+ monocytes from healthy subjects with the GG genotype compared with that in subjects with the AA or AG genotype. CONCLUSIONS: TRAF1 (+16860A/G) may be useful for predicting the clinical response to anti-TNF treatment and may contribute to resistance to treatment in RA patients with the GG genotype by increasing the TRAF1 expression in circulating inflammatory cells.


Subject(s)
Antibodies, Monoclonal, Humanized/pharmacology , Arthritis, Rheumatoid , TNF Receptor-Associated Factor 1/genetics , Tumor Necrosis Factor-alpha/antagonists & inhibitors , Adult , Aged , Antirheumatic Agents/pharmacology , Arthritis, Rheumatoid/drug therapy , Arthritis, Rheumatoid/genetics , Asian People/genetics , Female , Genotyping Techniques , Humans , Japan , Male , Middle Aged , Pharmacogenetics/methods , Polymorphism, Single Nucleotide , Predictive Value of Tests , Retrospective Studies , Treatment Outcome
10.
Cell Mol Biol (Noisy-le-grand) ; 56 Suppl: OL1447-52, 2010 Dec 15.
Article in English | MEDLINE | ID: mdl-21215240

ABSTRACT

Preconditioning of sublethal ischemia implies a cytoprotective mechanism against subsequent ischemia­induced cell death; however, the precise mechanism by which preconditioning protects against ischemic injury is not known. In the present study, we clarified whether pretreatment with a sublethal concentration of H2O2 could counter subsequent H2O2-induced cytotoxicity and also investigated the mechanisms of the cytoprotective effect of a sublethal concentration of H2O2. Using the MTT reduction assay and Calcein-AM staining assay, we showed that pretreatment with H2O2 (10 µM, 24 hr) of COS7 cells partially protected cells against subsequent H2O2 (6 mM, 1 hr) - induced cytotoxicity. The phosphorylation of Akt/PKB, a downstream target of phosphatydylinositol-3 kinase (PI3K), at Ser473 was augmented by H2O2 (10 µM) administration. This augmentation peaked at 10 minutes after H2O2 (10 µM) treatment and fell to the basal level at 24 hr. A blocker of PI3K, LY294002, significantly attenuated H2O2 (10 µM, 24 hr) - induced cytoprotection. In addition, pretreatment with LY294002 reduced H2O2 (10 µM, 10 min)-induced phosphorylation of Akt at Ser473. These findings suggest that a sublethal concentration of H2O2 exerts a cytoprotective effect against subsequent H2O2-induced cell death and that this cytoprotective effect of H2O2 is mediated by activation of the PI3K-Akt signaling pathway.


Subject(s)
Hydrogen Peroxide/toxicity , Phosphatidylinositol 3-Kinases/metabolism , Proto-Oncogene Proteins c-akt/metabolism , Signal Transduction , Animals , Apoptosis , COS Cells , Chlorocebus aethiops , Chromones/chemistry , Chromones/pharmacology , Cytoprotection/drug effects , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Morpholines/chemistry , Morpholines/pharmacology , Phosphorylation , Time Factors
11.
Gene Ther ; 16(5): 669-80, 2009 May.
Article in English | MEDLINE | ID: mdl-19225547

ABSTRACT

A conditionally replicative adenovirus is a novel anticancer agent designed to replicate selectively in tumor cells. However, a leak of the virus into systemic circulation from the tumors often causes ectopic infection of various organs. Therefore, suppression of naive viral tropism and addition of tumor-targeting potential are necessary to secure patient safety and increase the therapeutic effect of an oncolytic adenovirus in the clinical setting. We have recently developed a direct selection method of targeted vector from a random peptide library displayed on an adenoviral fiber knob to overcome the limitation that many cell type-specific ligands for targeted adenovirus vectors are not known. Here we examined whether the addition of a tumor-targeting ligand to a replication-competent adenovirus ablated for naive tropism enhances its therapeutic index. First, a peptide-display adenovirus library was screened on a pancreatic cancer cell line (AsPC-1), and particular peptide sequences were selected. The replication-competent adenovirus displaying the selected ligand (AdDeltaCAR-SYE) showed higher oncolytic potency in several other pancreatic cancer cell lines as well as AsPC-1 compared with the untargeted adenovirus (AdDeltaCAR). An intratumoral injection of AdDeltaCAR-SYE significantly suppressed the growth of AsPC-1 subcutaneous tumors, and an analysis of adenovirus titer in the tumors revealed an effective replication of the virus in the tumors. Ectopic liver gene transduction following the intratumoral injection of AdDeltaCAR-SYE was not increased compared with the AdDeltaCAR. The results showed that a tumor-targeting strategy using an adenovirus library is promising for optimizing the safety and efficacy of oncolytic adenovirus therapy.


Subject(s)
Adenoviridae/genetics , Oncolytic Virotherapy/methods , Pancreatic Neoplasms/therapy , Peptide Library , Adenoviridae/physiology , Animals , Cell Death , Female , Genetic Vectors , Humans , Mice , Mice, Inbred BALB C , Mice, Nude , Pancreatic Neoplasms/metabolism , Pancreatic Neoplasms/pathology , Tissue Distribution , Transduction, Genetic , Tumor Cells, Cultured , Viral Tropism/genetics , Virus Replication , Xenograft Model Antitumor Assays
12.
Br J Pharmacol ; 154(5): 949-57, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18587443

ABSTRACT

BACKGROUND AND PURPOSE: Inhibition of squalene synthesis could transform unstable, macrophage/lipid-rich coronary plaques into stable, fibromuscular plaques. We have here treated WHHLMI rabbits, a model for coronary atherosclerosis and myocardial infarction, with a novel squalene synthase inhibitor, lapaquistat acetate (TAK-475). EXPERIMENTAL APPROACH: Young male WHHLMI rabbits were fed a diet supplemented with lapaquistat acetate (100 or 200 mg per kg body weight per day) for 32 weeks. Serum lipid levels were monitored every 4 weeks. After the treatment, lipoprotein lipid and coenzyme Q10 levels were assayed, and coronary atherosclerosis and xanthomas were examined histopathologically or immunohistochemically. From histopathological and immunohistochemical sections, the composition of the plaque was analysed quantitatively with computer-assisted image analysis. Xanthoma was evaluated grossly. KEY RESULTS: Lapaquistat acetate decreased plasma cholesterol and triglyceride levels, by lowering lipoproteins containing apoB100. Development of atherosclerosis and xanthomatosis was suppressed. Accumulation of oxidized lipoproteins, macrophages and extracellular lipid was decreased in coronary plaques of treated animals. Treatment with lapaquistat acetate increased collagen concentration and transformed coronary plaques into fibromuscular plaques. Lapaquistat acetate also suppressed the expression of matrix metalloproteinase-1 and plasminogen activator inhibitor-1 in the plaque and increased peripheral coenzyme Q10 levels. Increased coenzyme Q10 levels and decreased very low-density lipoprotein cholesterol levels were correlated with improvement of coronary plaque composition. CONCLUSION AND IMPLICATIONS: Inhibition of squalene synthase by lapaquistat acetate delayed progression of coronary atherosclerosis and changed coronary atheromatous plaques from unstable, macrophage/lipid accumulation-rich, lesions to stable fibromuscular lesions.


Subject(s)
Coronary Artery Disease/prevention & control , Enzyme Inhibitors/pharmacology , Farnesyl-Diphosphate Farnesyltransferase/antagonists & inhibitors , Hypercholesterolemia/drug therapy , Hypolipidemic Agents/pharmacology , Macrophages/drug effects , Oxazepines/pharmacology , Piperidines/pharmacology , Xanthomatosis/prevention & control , Animals , Apolipoprotein B-100/blood , Cholesterol/blood , Collagen/metabolism , Coronary Artery Disease/enzymology , Coronary Artery Disease/etiology , Coronary Artery Disease/pathology , Disease Models, Animal , Disease Progression , Dose-Response Relationship, Drug , Enzyme Inhibitors/blood , Farnesyl-Diphosphate Farnesyltransferase/metabolism , Hypercholesterolemia/complications , Hypercholesterolemia/enzymology , Hypercholesterolemia/pathology , Hypolipidemic Agents/blood , Image Interpretation, Computer-Assisted , Immunohistochemistry , Lipid Metabolism/drug effects , Lipoproteins, LDL/metabolism , Macrophages/pathology , Male , Matrix Metalloproteinase 1/metabolism , Oxazepines/blood , Piperidines/blood , Plasminogen Activator Inhibitor 1/metabolism , Rabbits , Triglycerides/blood , Ubiquinone/analogs & derivatives , Ubiquinone/metabolism , Xanthomatosis/enzymology , Xanthomatosis/etiology , Xanthomatosis/pathology
13.
Gene Ther ; 14(20): 1448-60, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17700705

ABSTRACT

Targeting of gene transfer at the level of cell entry is one of the most attractive challenges in vector development. However, attempts to redirect adenovirus vectors to alternative receptors by engineering the capsid-coding region have shown limited success because proper targeting ligand-receptor systems on the cells of interest are generally unknown. Systematic approaches to generate adenovirus vectors targeting any given cell type need to be developed to achieve this goal. Here, we constructed an adenovirus library that was generated by a Cre-lox-mediated in vitro recombination between an adenoviral fiber-modified plasmid library and genomic DNA to display random peptides on a fiber knob. As proof of concept, we screened the adenovirus display library on a glioma cell line and observed selection of several particular peptide sequences. The targeted vector carrying the most frequently isolated peptide significantly enhanced gene transduction in the glioma cell line but not in many other cell lines. Because the insertion of a pre-selected peptide into a fiber knob often fails to generate an adenovirus vector, the selection of targeting peptides is highly useful in the context of the adenoviral capsid. This vector-screening system can facilitate the development of a targeted adenovirus vector for a variety of applications in medicine.


Subject(s)
Adenoviridae/genetics , Capsid Proteins/genetics , DNA, Viral/genetics , Genetic Vectors/genetics , Peptide Library , Animals , Bioreactors , Cell Line , Cell Line, Tumor , Female , Genetic Engineering , Glioma/genetics , Humans , Mice , Mice, Nude , Plasmids , Recombination, Genetic , Transduction, Genetic/methods , Transfection/methods
14.
Gene ; 303: 47-54, 2003 Jan 16.
Article in English | MEDLINE | ID: mdl-12559565

ABSTRACT

A truncated human RanBPM has been isolated as a protein binding to Ran, Ras-like nuclear small GTPase. Full-sized human RanBPM cDNA which was recently isolated, was found to encode a protein of 90 kDa which comprises a large protein complex. Consistent with this finding, several proteins were found to be co-precipitated with RanBPM by immunoprecipitation analysis. Accordingly, in the present study, we screened the human cDNA library by the two-hybrid method using RanBPM cDNA as bait. One novel protein designated as Twa1 (Two hybrid associated protein No. 1 with RanBPM), and two known proteins, a human homologue (hMuskelin) of mouse Muskelin and HSMpp8 were isolated repeatedly. Twa1 was well conserved through evolution and was localized within the nucleus. Interestingly, in addition to Muskelin and RanBPM, Twa1 was found to possess the LisH-CTLH motif which is detected in proteins involved in microtubule dynamics, cell migration, nucleokinesis and chromosome segregation. These functions overlap with functions suggested for the RanGTPase cycle. Immunoprecipitation and gel-filtration analyses indicated that both Twa1 and hMuskelin did indeed comprise a protein complex with RanBPM. Taken together with the fact that RanBPM interacts with Ran, our present findings suggested that there is an as yet uncovered function of the RanGTPase cycle.


Subject(s)
Nuclear Proteins/metabolism , Proteins/metabolism , ran GTP-Binding Protein/metabolism , Adaptor Proteins, Signal Transducing , Amino Acid Sequence , Animals , Blotting, Northern , CHO Cells , COS Cells , Cell Adhesion Molecules , Cell Line , Cricetinae , Cytoskeletal Proteins , Gene Expression , Glutathione Transferase/genetics , Glutathione Transferase/metabolism , HeLa Cells , Humans , Immunoblotting , Intracellular Signaling Peptides and Proteins , Mice , Molecular Sequence Data , Nuclear Proteins/genetics , Precipitin Tests , Protein Binding , Proteins/genetics , RNA, Messenger/genetics , RNA, Messenger/metabolism , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Saccharomyces cerevisiae/genetics , Sequence Homology, Amino Acid , Tumor Cells, Cultured , Two-Hybrid System Techniques , ran GTP-Binding Protein/genetics
15.
J Exp Clin Cancer Res ; 22(4): 557-63, 2003 Dec.
Article in English | MEDLINE | ID: mdl-15053297

ABSTRACT

It is well known that there are various adverse effects during chemotherapy for cancer treatment. A taste disorder is also seen in 35-70% of patients. It has been reported that a zinc deficiency is associated with the development of these alterations in taste sensation. The purpose of this pilot study was to determine whether the zinc including infusion had the effect on taste disorder in patients with lung cancer. Taste disorder was evaluated as the increase in electrical taste thresholds using an electrogustometer. The plasma zinc concentration was also measured. Although there was no significant correlation, the increase in taste thresholds was detected in many patients who had a low zinc concentration even before receiving chemotherapy. Moreover, after 2 weeks of chemotherapy, almost all patients who did not have a zinc containing infusion showed development of taste disorder (5/5, 100% at chorda tympani area; 4/5, 80% at glossopharyngeal area), whereas no development of taste disorder was observed in those patients receiving a zinc containing infusion. These results suggest the possibility that the administration of zinc during chemotherapy could be a useful supportive therapy for preventing taste disorder and to help maintain a better quality of life.


Subject(s)
Lung Neoplasms/drug therapy , Taste Disorders/prevention & control , Taste Threshold/drug effects , Zinc/administration & dosage , Zinc/pharmacology , Aged , Electricity , Humans , Lung Neoplasms/complications , Middle Aged , Pilot Projects , Quality of Life , Taste Disorders/drug therapy , Taste Disorders/etiology , Zinc/blood , Zinc/therapeutic use
16.
Intern Med ; 40(10): 1024-7, 2001 Oct.
Article in English | MEDLINE | ID: mdl-11688827

ABSTRACT

A 48-year-old man was diagnosed with primary alveolar proteinosis (PAP). Whole lung lavage was performed for treatment, and the opacity on his chest X-ray completely disappeared. The value of cytokeratin 19 fragment (CYFRA) in the serum was high at the beginning, decreased after lung lavage, and became elevated again when the disease recurred 7 months later. As PAP is thought to be a problem of surfactant secreted from type II pneumocytes, and a cytokeratin is present in the alveolar epithelial tissue, the value of serum CYFRA might be related to the severity of PAP.


Subject(s)
Keratins/blood , Pulmonary Alveolar Proteinosis/blood , Biomarkers/blood , Humans , Male , Middle Aged , Recurrence , Severity of Illness Index
17.
J Biol Chem ; 276(48): 44905-11, 2001 Nov 30.
Article in English | MEDLINE | ID: mdl-11555648

ABSTRACT

S-phase onset is controlled, so that it occurs only once every cell cycle. DNA is licensed for replication after mitosis in G(1), and passage through S-phase removes the license to replicate. In fission yeast, Cdc6/18 and Cdt1, two factors required for licensing, are central to ensuring that replication occurs once per cell cycle. We show that the human Cdt1 homologue (hCdt1), a nuclear protein, is present only during G(1). After S-phase onset, hCdt1 levels decrease, and it is hardly detected in cells in early S-phase or G(2). hCdt1 can associate with the DNA replication inhibitor Geminin, however these two proteins are mostly expressed at different cell cycle stages. hCdt1 mRNA, in contrast to hCdt1 protein, is expressed in S-phase-arrested cells, and its levels do not change dramatically during a cell cycle, suggesting that proteolytic rather than transcriptional controls ensure the timely accumulation of hCdt1. Consistent with this view, proteasome inhibitors stabilize hCdt1 in S-phase. In contrast, hCdc6/18 levels are constant through most of the cell cycle and are only low for a brief period at the end of mitosis. These results suggest that the presence of active hCdt1 may be crucial for determining when licensing is legitimate in human cells.


Subject(s)
Cell Cycle Proteins/chemistry , Cell Cycle Proteins/metabolism , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/metabolism , DNA/biosynthesis , G1 Phase , S Phase , Animals , Blotting, Northern , Blotting, Western , COS Cells , Cell Cycle , Cell Cycle Proteins/pharmacology , Cell Line , Cell Nucleus/metabolism , Cloning, Molecular , Geminin , HeLa Cells , Humans , Microscopy, Fluorescence , Plasmids/metabolism , Precipitin Tests , RNA, Messenger/metabolism , Time Factors , Tissue Distribution , Transcription, Genetic , Xenopus , Xenopus Proteins
18.
Gene ; 272(1-2): 25-33, 2001 Jul 11.
Article in English | MEDLINE | ID: mdl-11470507

ABSTRACT

Previously isolated RanBPM, a Ran-binding protein in the microtubule-organizing center, which had been thought to play a role in Ran-stimulated microtubule assembly, turned out to be a truncated protein. To clarify the function of RanBPM, we cloned the full-sized RanBPM cDNA that encodes a 90 kDa protein, compared to the previously isolated cDNA that encoded a 55 kDa protein. The newly cloned 5' coding region contains a great number of cytidine and guanidine nucleotides, like the CpG island. Thus, full-sized RanBPM cDNA encodes a long stretch of proline and glutamine residues in the N-terminal region. It comprises a protein complex of more than 670 kDa. Ran was detected in this complex when RanBPM and Ran were both ectopically expressed. New antibodies to RanBPM were prepared against three different regions of RanBPM. All of them detected a 90 kDa protein that is predominantly localized both in the nucleus and in the cytoplasmic region surrounding the centrosome, but none of them stained the centrosome. In this context, our previous notion that RanBPM is a centrosomal protein should be discarded. RanBPM is well conserved in the animal kingdom. It may play an important role in uncovering Ran-dependent nuclear events.


Subject(s)
DNA, Complementary/genetics , ran GTP-Binding Protein/genetics , Adaptor Proteins, Signal Transducing , Amino Acid Sequence , Animals , CHO Cells , COS Cells , Cell Line , Centrosome/chemistry , Cricetinae , Cytoskeletal Proteins , DNA, Complementary/chemistry , Glutamine/genetics , HeLa Cells , Humans , Immunoblotting , KB Cells , Molecular Sequence Data , Nuclear Proteins , Proline/genetics , Sequence Alignment , Sequence Analysis, DNA , Sequence Homology, Amino Acid , ran GTP-Binding Protein/analysis
19.
Genetics ; 158(2): 613-25, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11404326

ABSTRACT

Dis3p, a subunit of the exosome, interacts directly with Ran. To clarify the relationship between the exosome and the RanGTPase cycle, a series of temperature-sensitive Saccharomyces cerevisiae dis3 mutants were isolated and their 5.8S rRNA processing was compared with processing in strains with mutations in a S. cerevisiae Ran homologue, Gsp1p. In both dis3 and gsp1 mutants, 3' processing of 7S-to-5.8S rRNA was blocked at three identical sites in an allele-specific manner. In contrast, the 5' end of 5.8S rRNA was terminated normally in gsp1 and in dis3. Inhibition of 5.8S rRNA maturation in gsp1 was rescued by overexpression of nuclear exosome components Dis3p, Rrp4p, and Mtr4p, but not by a cytoplasmic exosome component, Ski2p. Furthermore, gsp1 and dis3 accumulated the 5'-A0 fragment of 35S pre-rRNA, which is also degraded by the exosome, and the level of 27S rRNA was reduced. Neither 5.8S rRNA intermediates nor 5'-A0 fragments were observed in mutants defective in the nucleocytoplasmic transport, indicating that Gsp1p regulates rRNA processing through Dis3p, independent of nucleocytoplasmic transport.


Subject(s)
GTP Phosphohydrolases/metabolism , Monomeric GTP-Binding Proteins/metabolism , Nuclear Proteins/metabolism , RNA, Ribosomal, 5.8S/metabolism , RNA, Small Cytoplasmic/metabolism , Saccharomyces cerevisiae Proteins , Saccharomyces cerevisiae/genetics , Signal Recognition Particle/metabolism , Active Transport, Cell Nucleus , Alleles , Cell Nucleus/metabolism , Cytoplasm/metabolism , DEAD-box RNA Helicases , DNA Primers/metabolism , Exoribonucleases , Exosome Multienzyme Ribonuclease Complex , Fungal Proteins/genetics , Genotype , Models, Genetic , Monomeric GTP-Binding Proteins/genetics , Mutagenesis, Site-Directed , Mutation , Nuclear Proteins/genetics , Plasmids/metabolism , Polymerase Chain Reaction , RNA Helicases/metabolism , RNA Splicing , RNA, Messenger/metabolism , RNA, Ribosomal/metabolism , RNA-Binding Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Temperature , Time Factors
20.
Electrophoresis ; 22(2): 230-4, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11288889

ABSTRACT

We have developed quartz microchips for electrophoresis and a linear imaging UV detector along with the microchip. The microchips have an optical slit, which cut off the stray light in order to improve the sensitivity of UV absorption detection on the chip, at the bonding interface. They have been successfully fabricated on synthesized quartz glass substrates using the hydrofluoric acid (HF) solution bonding method. The signal level of UV absorption detection was effectively improved by applying microchips with the "on-chip" optical slit. It is also possible to improve the signal-to-noise ratio by repetitive scanning of linear photodiode array located along the separation channel, and signal averaging during elimination of the potential. Furthermore, the analysis may be performed until the separation of the target component is complete, because the real-time migration pattern of each component in the sample can be seen just as in a slab-gel electrophoresis, thus enabling a shorter analysis time.


Subject(s)
Electrophoresis/instrumentation , Microchemistry/instrumentation , Photometry/instrumentation , Ultraviolet Rays , Equipment Design , Miniaturization , Optics and Photonics/instrumentation , Quartz , Silicon
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