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2.
Plants (Basel) ; 12(4)2023 02 07.
Article in English | MEDLINE | ID: mdl-36840090

ABSTRACT

Seeds and bark of Garcinia kola Heckel (Clusiaceae) are popular products in West and Central Africa. Despite the tree's economic and cultural importance, little is known about its phenotypic and genotypic variation. This study characterised the morphological and genetic diversity of G. kola in South Cameroon, searching for traits and populations that might be used for domestication. Morphological assessment and amplified fragment length polymorphism (AFLP) markers were applied to characterise diversity among geographic populations from Central and South regions, and between managed and wild trees. AFLP-SURV and analysis of molecular variance results indicated that a major part of genetic diversity is harboured within populations rather than between them. Bayesian analysis, principal component analysis and t-SNE identified three clusters where Ebolowa emerged as the transition population, combining features from both regions. Trees from the south had a higher prevalence of morphological domestication-related characteristics. Trees from the central region, on the other hand, demonstrated greater genetic diversity. No significant differences in phenotype and genotype were revealed between wild and managed populations, suggesting G. kola is still in the early stages of its domestication process.

3.
Malar J ; 20(1): 236, 2021 May 26.
Article in English | MEDLINE | ID: mdl-34039364

ABSTRACT

BACKGROUND: Malaria remains a public health burden especially in Nigeria. To develop new malaria control and elimination strategies or refine existing ones, understanding parasite population diversity and transmission patterns is crucial. METHODS: In this study, characterization of the parasite diversity and structure of Plasmodium falciparum isolates from 633 dried blood spot samples in Nigeria was carried out using 12 microsatellite loci of P. falciparum. These microsatellite loci were amplified via semi-nested polymerase chain reaction (PCR) and fragments were analysed using population genetic tools. RESULTS: Estimates of parasite genetic diversity, such as mean number of different alleles (13.52), effective alleles (7.13), allelic richness (11.15) and expected heterozygosity (0.804), were high. Overall linkage disequilibrium was weak (0.006, P < 0.001). Parasite population structure was low (Fst: 0.008-0.105, AMOVA: 0.039). CONCLUSION: The high level of parasite genetic diversity and low population structuring in this study suggests that parasite populations circulating in Nigeria are homogenous. However, higher resolution methods, such as the 24 SNP barcode and whole genome sequencing, may capture more specific parasite genetic signatures circulating in the country. The results obtained can be used as a baseline for parasite genetic diversity and structure, aiding in the formulation of appropriate therapeutic and control strategies in Nigeria.


Subject(s)
Genetic Variation , Malaria, Falciparum/parasitology , Microsatellite Repeats , Plasmodium falciparum/genetics , Child , Child, Preschool , Dried Blood Spot Testing , Female , Humans , Infant , Linkage Disequilibrium , Male , Nigeria
4.
Clin Gastroenterol Hepatol ; 19(4): 836-838.e3, 2021 04.
Article in English | MEDLINE | ID: mdl-33278574

ABSTRACT

The COVID-19 pandemic poses unprecedented and unique challenges to gastroenterologists eager to maintain clinical practice, patients' health, and their own physical/mental well-being. We aimed to estimate the prevalence and critical determinants of psychological distress in gastroenterologists during the COVID-19 pandemic.


Subject(s)
COVID-19/epidemiology , Gastroenterologists/psychology , Mental Health , Stress, Psychological/epidemiology , COVID-19/complications , COVID-19/psychology , Cross-Sectional Studies , Humans , Pandemics , Prevalence , Retrospective Studies , Stress, Psychological/etiology , Stress, Psychological/psychology , Surveys and Questionnaires , United States/epidemiology
5.
Pediatr Infect Dis J ; 33 Suppl 1: S19-22, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24343608

ABSTRACT

BACKGROUND: Severe rotavirus diarrhea in children is a major cause of morbidity globally and mortality in developing countries. It is estimated to be responsible for >453,000 deaths in children <5 years of age globally and 232,000 in the African region. The aim of the current study was to determine the prevalence of rotavirus gastroenteritis among hospitalized children <5 years of age in Enugu and to support awareness and advocacy efforts for the introduction of rotavirus vaccines in Nigeria. METHODS: World Health Organization-standardized case forms were used to collect data from eligible children with non-bloody diarrhea from October 2010 to September 2012. Data collected included socio-demographic and clinical information. Stool samples were obtained from recruited children and tested for rotavirus antigen using the Oxoid Prospect ELISA Kit (Basingstoke, United Kingdom). RESULTS: Of the 615 diarrhea stool samples collected, 344 (56%) were positive for human rotavirus. Of the 344 positive samples, 329 (96%) were children <2 years of age, while 247 (77%) were <1 year of age. Peak rotavirus season occurred during the cold dry months of December to April during which 95% of all cases occurred. CONCLUSIONS: This study found a relatively high incidence of severe rotavirus-associated diarrhea disease in Nigeria and infants were the most affected. It highlights the urgent need for introduction of rotavirus vaccine into the national immunization program and the need to adequately equip health facilities to enable them administer intravenous fluids to severe diarrhea patients to reduce morbidity and mortality.


Subject(s)
Diarrhea/epidemiology , Gastroenteritis/epidemiology , Rotavirus Infections/epidemiology , Child, Preschool , Cross-Sectional Studies , Diarrhea/therapy , Diarrhea/virology , Female , Fluid Therapy , Gastroenteritis/therapy , Gastroenteritis/virology , Hospitalization , Humans , Infant , Male , Nigeria/epidemiology , Rotavirus Infections/therapy
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