Species-specific wiring of cortical circuits for small-world networks in the primary visual cortex.

Long-range horizontal connections (LRCs) are conspicuous anatomical structures in the primary visual cortex (V1) of mammals, yet their detailed functions in relation to visual processing are not fully understood. Here, we show that LRCs are key components to organize a "small-world network" optimized for each size of the visual cortex, enabling the cost-efficient integration of visual information. Using computational simulations of a biologically inspired model neural network, we found that sparse LRCs added to networks, combined with dense local connections, compose a small-world network and significantly enhance image classification performance. We confirmed that the performance of the network appeared to be strongly correlated with the small-world coefficient of the model network under various conditions. Our theoretical model demonstrates that the amount of LRCs to build a small-world network depends on each size of cortex and that LRCs are beneficial only when the size of the network exceeds a certain threshold. Our model simulation of various sizes of cortices validates this prediction and provides an explanation of the species-specific existence of LRCs in animal data. Our results provide insight into a biological strategy of the brain to balance functional performance and resource cost.

Comparison of visual quantities in untrained neural networks.

The ability to compare quantities of visual objects with two distinct measures, proportion and difference, is observed even in newborn animals. However, how this function originates in the brain, even before visual experience, remains unknown. Here, we propose a model in which neuronal tuning for quantity comparisons can arise spontaneously in completely untrained neural circuits. Using a biologically inspired model neural network, we find that single units selective to proportions and differences between visual quantities emerge in randomly initialized feedforward wirings and that they enable the network to perform quantity comparison tasks. Notably, we find that two distinct tunings to proportion and difference originate from a random summation of monotonic, nonlinear neural activities and that a slight difference in the nonlinear response function determines the type of measure. Our results suggest that visual quantity comparisons are primitive types of functions that can emerge spontaneously before learning in young brains.

Kv7/KCNQ potassium channels in cortical hyperexcitability and juvenile seizure-related death in Ank2-mutant mice.

Autism spectrum disorders (ASD) represent neurodevelopmental disorders characterized by social deficits, repetitive behaviors, and various comorbidities, including epilepsy. ANK2, which encodes a neuronal scaffolding protein, is frequently mutated in ASD, but its in vivo functions and disease-related mechanisms are largely unknown. Here, we report that mice with Ank2 knockout restricted to cortical and hippocampal excitatory neurons (Ank2-cKO mice) show ASD-related behavioral abnormalities and juvenile seizure-related death. Ank2-cKO cortical neurons show abnormally increased excitability and firing rate. These changes accompanied decreases in the total level and function of the Kv7.2/KCNQ2 and Kv7.3/KCNQ3 potassium channels and the density of these channels in the enlengthened axon initial segment. Importantly, the Kv7 agonist, retigabine, rescued neuronal excitability, juvenile seizure-related death, and hyperactivity in Ank2-cKO mice. These results suggest that Ank2 regulates neuronal excitability by regulating the length of and Kv7 density in the AIS and that Kv7 channelopathy is involved in Ank2-related brain dysfunctions.

Npas4-mediated dopaminergic regulation of safety memory consolidation.

Amygdala circuitry encodes associations between conditioned stimuli and aversive unconditioned stimuli and also controls fear expression. However, whether and how non-threatening information for unpaired conditioned stimuli (CS-) is discretely processed remains unknown. The fear expression toward CS- is robust immediately after fear conditioning but then becomes negligible after memory consolidation. The synaptic plasticity of the neural pathway from the lateral to the anterior basal amygdala gates the fear expression of CS-, depending upon neuronal PAS domain protein 4 (Npas4)-mediated dopamine receptor D4 (Drd4) synthesis, which is precluded by stress exposure or corticosterone injection. Herein, we show cellular and molecular mechanisms that regulate the non-threatening (safety) memory consolidation, supporting the fear discrimination.

Invariance of object detection in untrained deep neural networks.

The ability to perceive visual objects with various types of transformations, such as rotation, translation, and scaling, is crucial for consistent object recognition. In machine learning, invariant object detection for a network is often implemented by augmentation with a massive number of training images, but the mechanism of invariant object detection in biological brains-how invariance arises initially and whether it requires visual experience-remains elusive. Here, using a model neural network of the hierarchical visual pathway of the brain, we show that invariance of object detection can emerge spontaneously in the complete absence of learning. First, we found that units selective to a particular object class arise in randomly initialized networks even before visual training. Intriguingly, these units show robust tuning to images of each object class under a wide range of image transformation types, such as viewpoint rotation. We confirmed that this "innate" invariance of object selectivity enables untrained networks to perform an object-detection task robustly, even with images that have been significantly modulated. Our computational model predicts that invariant object tuning originates from combinations of non-invariant units via random feedforward projections, and we confirmed that the predicted profile of feedforward projections is observed in untrained networks. Our results suggest that invariance of object detection is an innate characteristic that can emerge spontaneously in random feedforward networks.

Suppressed prefrontal neuronal firing variability and impaired social representation in IRSp53-mutant mice.

Social deficit is a major feature of neuropsychiatric disorders, including autism spectrum disorders, schizophrenia, and attention-deficit/hyperactivity disorder, but its neural mechanisms remain unclear. Here, we examined neuronal discharge characteristics in the medial prefrontal cortex (mPFC) of IRSp53/Baiap2-mutant mice, which show social deficits, during social approach. We found a decrease in the proportion of IRSp53-mutant excitatory mPFC neurons encoding social information, but not that encoding non-social information. In addition, the firing activity of IRSp53-mutant neurons was less differential between social and non-social targets. IRSp53-mutant excitatory mPFC neurons displayed an increase in baseline neuronal firing, but decreases in the variability and dynamic range of firing as well as burst firing during social and non-social target approaches compared to wild-type controls. Treatment of memantine, an NMDA receptor antagonist that rescues social deficit in IRSp53-mutant mice, alleviates the reduced burst firing of IRSp53-mutant pyramidal mPFC neurons. These results suggest that suppressed neuronal activity dynamics and burst firing may underlie impaired cortical encoding of social information and social behaviors in IRSp53-mutant mice.

Face detection in untrained deep neural networks.

Face-selective neurons are observed in the primate visual pathway and are considered as the basis of face detection in the brain. However, it has been debated as to whether this neuronal selectivity can arise innately or whether it requires training from visual experience. Here, using a hierarchical deep neural network model of the ventral visual stream, we suggest a mechanism in which face-selectivity arises in the complete absence of training. We found that units selective to faces emerge robustly in randomly initialized networks and that these units reproduce many characteristics observed in monkeys. This innate selectivity also enables the untrained network to perform face-detection tasks. Intriguingly, we observed that units selective to various non-face objects can also arise innately in untrained networks. Our results imply that the random feedforward connections in early, untrained deep neural networks may be sufficient for initializing primitive visual selectivity.

Excitatory synapses and gap junctions cooperate to improve Pv neuronal burst firing and cortical social cognition in Shank2-mutant mice.

NMDA receptor (NMDAR) and GABA neuronal dysfunctions are observed in animal models of autism spectrum disorders, but how these dysfunctions impair social cognition and behavior remains unclear. We report here that NMDARs in cortical parvalbumin (Pv)-positive interneurons cooperate with gap junctions to promote high-frequency (>80 Hz) Pv neuronal burst firing and social cognition. Shank2-/- mice, displaying improved sociability upon NMDAR activation, show impaired cortical social representation and inhibitory neuronal burst firing. Cortical Shank2-/- Pv neurons show decreased NMDAR activity, which suppresses the cooperation between NMDARs and gap junctions (GJs) for normal burst firing. Shank2-/- Pv neurons show compensatory increases in GJ activity that are not sufficient for social rescue. However, optogenetic boosting of Pv neuronal bursts, requiring GJs, rescues cortical social cognition in Shank2-/- mice, similar to the NMDAR-dependent social rescue. Therefore, NMDARs and gap junctions cooperate to promote cortical Pv neuronal bursts and social cognition.

Interhemispheric Cortico-Cortical Pathway for Sequential Bimanual Movements in Mice.

Animals precisely coordinate their left and right limbs for various adaptive purposes. While the left and right limbs are clearly controlled by different cortical hemispheres, the neural mechanisms that determine the action sequence between them remains elusive. Here, we have established a novel head-fixed bimanual-press (biPress) sequence task in which mice sequentially press left and right pedals with their forelimbs in a predetermined order. Using this motor task, we found that the motor cortical neurons responsible for the first press (1P) also generate independent motor signals for the second press (2P) by the opposite forelimb during the movement transitions between forelimbs. Projection-specific calcium imaging and optogenetic manipulation revealed these motor signals are transferred from one motor cortical hemisphere to the other via corticocortical projections. Together, our results suggest the motor cortices coordinate sequential bimanual movements through corticocortical pathways.

Parallel processing of working memory and temporal information by distinct types of cortical projection neurons.

It is unclear how different types of cortical projection neurons work together to support diverse cortical functions. We examined the discharge characteristics and inactivation effects of intratelencephalic (IT) and pyramidal tract (PT) neurons-two major types of cortical excitatory neurons that project to cortical and subcortical structures, respectively-in the deep layer of the medial prefrontal cortex in mice performing a delayed response task. We found stronger target-dependent firing of IT than PT neurons during the delay period. We also found the inactivation of IT neurons, but not PT neurons, impairs behavioral performance. In contrast, PT neurons carry more temporal information than IT neurons during the delay period. Our results indicate a division of labor between IT and PT projection neurons in the prefrontal cortex for the maintenance of working memory and for tracking the passage of time, respectively.

Non-Cell Autonomous Epileptogenesis in Focal Cortical Dysplasia.

OBJECTIVE: Low-level somatic mosaicism in the brain has been shown to be a major genetic cause of intractable focal epilepsy. However, how a relatively few mutation-carrying neurons are able to induce epileptogenesis at the local network level remains poorly understood. METHODS: To probe the origin of epileptogenesis, we measured the excitability of neurons with MTOR mutation and nearby nonmutated neurons recorded by whole-cell patch-clamp and array-based electrodes comparing the topographic distribution of mutation. Computational simulation is used to understand neural network-level changes based on electrophysiological properties. To examine the underlying mechanism, we measured inhibitory and excitatory synaptic inputs in mutated neurons and nearby neurons by electrophysiological and histological methods using the mouse model and postoperative human brain tissue for cortical dysplasia. To explain non-cell-autonomous hyperexcitability, an inhibitor of adenosine kinase was injected into mice to enhance adenosine signaling and to mitigate hyperactivity of nearby nonmutated neurons. RESULTS: We generated mice with a low-level somatic mutation in MTOR presenting spontaneous seizures. The seizure-triggering hyperexcitability originated from nonmutated neurons near mutation-carrying neurons, which proved to be less excitable than nonmutated neurons. Interestingly, the net balance between excitatory and inhibitory synaptic inputs onto mutated neurons remained unchanged. Additionally, we found that inhibition of adenosine kinase, which affects adenosine metabolism and neuronal excitability, reduced the hyperexcitability of nonmutated neurons. INTERPRETATION: This study shows that neurons carrying somatic mutations in MTOR lead to focal epileptogenesis via non-cell-autonomous hyperexcitability of nearby nonmutated neurons. ANN NEUROL 2021;90:285-299.

Periodic clustering of simple and complex cells in visual cortex.

Neurons in the primary visual cortex (V1) are often classified as simple or complex cells, but it is debated whether they are discrete hierarchical classes of neurons or if they represent a continuum of variation within a single class of cells. Herein, we show that simple and complex cells may arise commonly from the feedforward projections from the retina. From analysis of the cortical receptive fields in cats, we show evidence that simple and complex cells originate from the periodic variation of ON-OFF segregation in the feedforward projection of retinal mosaics, by which they organize into periodic clusters in V1. From data in cats, we observed that clusters of simple and complex receptive fields correlate topographically with orientation maps, which supports our model prediction. Our results suggest that simple and complex cells are not two distinct neural populations but arise from common retinal afferents, simultaneous with orientation tuning.

Visual number sense in untrained deep neural networks.

Number sense, the ability to estimate numerosity, is observed in naïve animals, but how this cognitive function emerges in the brain remains unclear. Here, using an artificial deep neural network that models the ventral visual stream of the brain, we show that number-selective neurons can arise spontaneously, even in the complete absence of learning. We also show that the responses of these neurons can induce the abstract number sense, the ability to discriminate numerosity independent of low-level visual cues. We found number tuning in a randomly initialized network originating from a combination of monotonically decreasing and increasing neuronal activities, which emerges spontaneously from the statistical properties of bottom-up projections. We confirmed that the responses of these number-selective neurons show the single- and multineuron characteristics observed in the brain and enable the network to perform number comparison tasks. These findings provide insight into the origin of innate cognitive functions.

Projection of Orthogonal Tiling from the Retina to the Visual Cortex.

In higher mammals, the primary visual cortex (V1) is organized into diverse tuning maps of visual features. The topography of these maps intersects orthogonally, but it remains unclear how such a systematic relationship can develop. Here, we show that the orthogonal organization already exists in retinal ganglion cell (RGC) mosaics, providing a blueprint of the organization in V1. From analysis of the RGC mosaics data in monkeys and cats, we find that the ON-OFF RGC distance and ON-OFF angle of neighboring RGCs are organized into a topographic tiling across mosaics, analogous to the orthogonal intersection of cortical tuning maps. Our model simulation shows that the ON-OFF distance and angle in RGC mosaics correspondingly initiate ocular dominance/spatial frequency tuning and orientation tuning, resulting in the orthogonal intersection of cortical tuning maps. These findings suggest that the regularly structured ON-OFF patterns mirrored from the retina initiate the uniform representation of combinations of map features over the visual space.

A brain-inspired network architecture for cost-efficient object recognition in shallow hierarchical neural networks.

The brain successfully performs visual object recognition with a limited number of hierarchical networks that are much shallower than artificial deep neural networks (DNNs) that perform similar tasks. Here, we show that long-range horizontal connections (LRCs), often observed in the visual cortex of mammalian species, enable such a cost-efficient visual object recognition in shallow neural networks. Using simulations of a model hierarchical network with convergent feedforward connections and LRCs, we found that the addition of LRCs to the shallow feedforward network significantly enhances the performance of networks for image classification, to a degree that is comparable to much deeper networks. We found that a combination of sparse LRCs and dense local connections dramatically increases performance per wiring cost. From network pruning with gradient-based optimization, we also confirmed that LRCs could emerge spontaneously by minimizing the total connection length while maintaining performance. Ablation of emerged LRCs led to a significant reduction of classification performance, which implies these LRCs are crucial for performing image classification. Taken together, our findings suggest a brain-inspired strategy for constructing a cost-efficient network architecture to implement parsimonious object recognition under physical constraints such as shallow hierarchical depth.

Spatial organization of functional clusters representing reward and movement information in the striatal direct and indirect pathways.

To obtain insights into striatal neural processes underlying reward-based learning and movement control, we examined spatial organizations of striatal neurons related to movement and reward-based learning. For this, we recorded the activity of direct- and indirect-pathway neurons (D1 and A2a receptor-expressing neurons, respectively) in mice engaged in probabilistic classical conditioning and open-field free exploration. We found broadly organized functional clusters of striatal neurons in the direct as well as indirect pathways for both movement- and reward-related variables. Functional clusters for different variables were partially overlapping in both pathways, but the overlap between outcome- and value-related functional clusters was greater in the indirect than direct pathway. Also, value-related spatial clusters were progressively refined during classical conditioning. Our study shows the broad and learning-dependent spatial organization of functional clusters of dorsal striatal neurons in the direct and indirect pathways. These findings further argue against the classic model of the basal ganglia and support the importance of spatiotemporal patterns of striatal neuronal ensemble activity in the control of behavior.

Spontaneous Retinal Waves Can Generate Long-Range Horizontal Connectivity in Visual Cortex.

In the primary visual cortex (V1) of higher mammals, long-range horizontal connections (LHCs) are observed to develop, linking iso-orientation domains of cortical tuning. It is unknown how this feature-specific wiring of circuitry develops before eye-opening. Here, we suggest that LHCs in V1 may originate from spatiotemporally structured feedforward activities generated from spontaneous retinal waves. Using model simulations based on the anatomy and observed activity patterns of the retina, we show that waves propagating in retinal mosaics can initialize the wiring of LHCs by coactivating neurons of similar tuning, whereas equivalent random activities cannot induce such organizations. Simulations showed that emerged LHCs can produce the patterned activities observed in V1, matching the topography of the underlying orientation map. The model can also reproduce feature-specific microcircuits in the salt-and-pepper organizations found in rodents. Our results imply that early peripheral activities contribute significantly to cortical development of functional circuits.SIGNIFICANCE STATEMENT Long-range horizontal connections (LHCs) in the primary visual cortex (V1) are observed to emerge before the onset of visual experience, thereby selectively connecting iso-domains of orientation map. However, it is unknown how such feature-specific wirings develop before eye-opening. Here, we show that LHCs in V1 may originate from the feature-specific activation of cortical neurons by spontaneous retinal waves during early developmental stages. Our simulations of a visual cortex model show that feedforward activities from the retina initialize the spatial organization of activity patterns in V1, which induces visual feature-specific wirings in the V1 neurons. Our model also explains the origin of cortical microcircuits observed in rodents, suggesting that the proposed developmental mechanism is universally applicable to circuits of various mammalian species.

Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mouse Visual Cortex.

Recent breakthroughs in neuroanatomical tracing methods have helped unravel complicated neural connectivity in whole-brain tissue at single-cell resolution. However, in most cases, analysis of brain images remains dependent on highly subjective and sample-specific manual processing, preventing precise comparison across sample animals. In the present study, we introduce AMaSiNe, software for automated mapping of single neurons in the standard mouse brain atlas with annotated regions. AMaSiNe automatically calibrates misaligned and deformed slice samples to locate labeled neuronal positions from multiple brain samples into the standardized 3D Allen Mouse Brain Reference Atlas. We exploit the high fidelity and reliability of AMaSiNe to investigate the topographic structures of feedforward projections from the lateral geniculate nucleus to the primary visual area by reconstructing rabies-virus-injected brain slices in 3D space. Our results demonstrate that distinct organization of neural projections can be precisely mapped using AMaSiNe.

Retino-Cortical Mapping Ratio Predicts Columnar and Salt-and-Pepper Organization in Mammalian Visual Cortex.

In the mammalian primary visual cortex, neural tuning to stimulus orientation is organized in either columnar or salt-and-pepper patterns across species. For decades, this sharp contrast has spawned fundamental questions about the origin of functional architectures in visual cortex. However, it is unknown whether these patterns reflect disparate developmental mechanisms across mammalian taxa or simply originate from variation of biological parameters under a universal development process. In this work, after the analysis of data from eight mammalian species, we show that cortical organization is predictable by a single factor, the retino-cortical mapping ratio. Groups of species with or without columnar clustering are distinguished by the feedforward sampling ratio, and model simulations with controlled mapping conditions reproduce both types of organization. Prediction from the Nyquist theorem explains this parametric division of the patterns with high accuracy. Our results imply that evolutionary variation of physical parameters may induce development of distinct functional circuitry.

Distinct roles of parvalbumin- and somatostatin-expressing neurons in flexible representation of task variables in the prefrontal cortex.

A hallmark of the prefrontal cortex (PFC) is flexible representation of task-relevant variables. To investigate roles of different interneuron subtypes in this process, we examined discharge characteristics and inactivation effects of parvalbumin (PV)- and somatostatin (SST)-expressing neurons in the mouse PFC during probabilistic classical conditioning. We found activity patterns and inactivation effects differed between PV and SST neurons: SST neurons conveyed cue-associated quantitative value signals until trial outcome, whereas PV neurons maintained valence signals even after trial outcome. Also, PV, but not SST, neuronal population showed opposite responses to reward and punishment. Moreover, inactivation of PV, but not SST, neurons affected outcome responses and activity reversal of pyramidal neurons. Modeling suggested opposite responses of PV neurons to reward and punishment as an efficient mechanism for facilitating rapid cue-outcome contingency learning. Our results suggest primary roles of mPFC PV neurons in rapid value updating and SST neurons in predicting values of upcoming events.