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1.
Commun Biol ; 5(1): 1249, 2022 11 15.
Article in English | MEDLINE | ID: mdl-36376429

ABSTRACT

Isoflavonoids play important roles in plant defense and also exhibit a range of mammalian health-promoting activities. Their biosynthesis is initiated by two enzymes with unusual catalytic activities; 2-hydroxyisoflavanone synthase (2-HIS), a membrane-bound cytochrome P450 catalyzing a coupled aryl-ring migration and hydroxylation, and 2-hydroxyisoflavanone dehydratase (2-HID), a member of a large carboxylesterase family that paradoxically catalyzes dehydration of 2-hydroxyisoflavanones to isoflavone. Here we report the crystal structures of 2-HIS from Medicago truncatula and 2-HID from Pueraria lobata. The 2-HIS structure reveals a unique cytochrome P450 conformation and heme and substrate binding mode that facilitate the coupled aryl-ring migration and hydroxylation reactions. The 2-HID structure reveals the active site architecture and putative catalytic residues for the dual dehydratase and carboxylesterase activities. Mutagenesis studies revealed key residues involved in substrate binding and specificity. Understanding the structural basis of isoflavone biosynthesis will facilitate the engineering of new bioactive isoflavonoids.


Subject(s)
Isoflavones , Animals , Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/metabolism , Protein Conformation , Hydro-Lyases/metabolism , Carboxylic Ester Hydrolases/metabolism , Mammals
2.
BMC Biol ; 17(1): 34, 2019 04 17.
Article in English | MEDLINE | ID: mdl-30995910

ABSTRACT

BACKGROUND: Ionotropic receptors (IRs) are a large, divergent subfamily of ionotropic glutamate receptors (iGluRs) that are expressed in diverse peripheral sensory neurons and function in olfaction, taste, hygrosensation and thermosensation. Analogous to the cell biological properties of their synaptic iGluR ancestors, IRs are thought to form heteromeric complexes that localise to the ciliated dendrites of sensory neurons. IR complexes are composed of selectively expressed 'tuning' receptors and one of two broadly expressed co-receptors (IR8a or IR25a). While the extracellular ligand-binding domain (LBD) of tuning IRs is likely to define the stimulus specificity of the complex, the role of this domain in co-receptors is unclear. RESULTS: We identify a sequence in the co-receptor LBD, the 'co-receptor extra loop' (CREL), which is conserved across IR8a and IR25a orthologues but not present in either tuning IRs or iGluRs. The CREL contains a single predicted N-glycosylation site, which we show bears a sugar modification in recombinantly expressed IR8a. Using the Drosophila olfactory system as an in vivo model, we find that a transgenically encoded IR8a mutant in which the CREL cannot be N-glycosylated is impaired in localisation to cilia in some, though not all, populations of sensory neurons expressing different tuning IRs. This defect can be complemented by the presence of endogenous wild-type IR8a, indicating that IR complexes contain at least two IR8a subunits and that this post-translational modification is dispensable for protein folding or complex assembly. Analysis of the subcellular distribution of the mutant protein suggests that its absence from sensory cilia is due to a failure in exit from the endoplasmic reticulum. Protein modelling and in vivo analysis of tuning IR and co-receptor subunit interactions by a fluorescent protein fragment complementation assay reveal that the CREL N-glycosylation site is likely to be located on the external face of a heterotetrameric IR complex. CONCLUSIONS: Our data reveal an important role for the IR co-receptor LBD in control of intracellular transport, provide novel insights into the stoichiometry and assembly of IR complexes and uncover an unexpected heterogeneity in the trafficking regulation of this sensory receptor family.


Subject(s)
Drosophila Proteins/genetics , Drosophila melanogaster/genetics , Receptors, Ionotropic Glutamate/genetics , Amino Acid Sequence , Animals , Animals, Genetically Modified/genetics , Animals, Genetically Modified/metabolism , Drosophila Proteins/chemistry , Drosophila Proteins/metabolism , Drosophila melanogaster/metabolism , Protein Transport , Receptors, Ionotropic Glutamate/chemistry , Receptors, Ionotropic Glutamate/metabolism , Sequence Alignment
3.
Sci Rep ; 8(1): 2796, 2018 02 12.
Article in English | MEDLINE | ID: mdl-29434276

ABSTRACT

During reproduction in flowering plants, the male gametophyte delivers an immotile male gamete to the female gametophyte in the pistil by formation of pollen tubes. In Arabidopsis thaliana, two synergid cells situated on either side of the egg cell produce cysteine-rich chemoattractant peptide LURE that guides the pollen tube to the female gametophyte for sexual reproduction. Recently, in Arabidopsis thaliana, Pollen Receptor Kinase 3 (PRK3), along with PRK1, PRK6, and PRK8, have been predicted to be the receptors responsible for sensing LURE. These receptors belong to the Leucine Rich Repeat Receptor Like Kinases (LRR-RLKs), the largest family of receptor kinases found in Arabidopsis thaliana. How PRKs regulate the growth and development of the pollen tube remains elusive. In order to better understand the PRK-mediated signaling mechanism in pollen tube growth and guidance, we have determined the crystal structure of the extracellular domain (ecd) of PRK3 at 2.5 Å, which resembles the SERK family of plant co-receptors. The structure of ecdPRK3 is composed of a conserved surface that coincides with the conserved receptor-binding surface of the SERK family of co-receptors. Our structural analyses of PRK3 have provided a template for future functional studies of the PRK family of LRR-RLK receptors in the regulation of pollen tube development.


Subject(s)
Arabidopsis Proteins/metabolism , Plant Proteins/metabolism , Protein Kinases/metabolism , Protein Serine-Threonine Kinases/metabolism , Arabidopsis/metabolism , Flowers/growth & development , Ovule/metabolism , Pollen/metabolism , Pollen Tube/growth & development , Pollination , Reproduction/physiology , Signal Transduction/physiology
4.
Neuroscience ; 357: 1-11, 2017 08 15.
Article in English | MEDLINE | ID: mdl-28576728

ABSTRACT

In mammals, the master circadian clock resides in the suprachiasmatic nucleus (SCN). The SCN is characterized by robust circadian oscillations of clock gene expression and neuronal firing. The synchronization of circadian oscillations among individual cells in the SCN is attributed to intercellular coupling. Previous studies have shown that gap junctions, specifically those composed of connexin-36 (Cx36) subunits, are required for coupling of electrical firing among SCN neurons at a time scale of milliseconds. However, it remains unknown whether Cx36 gap junctions also contribute to coupling of circadian (∼24h) rhythms of clock gene expression. Here, we investigated circadian expression patterns of the clock gene Period 2 (Per2) in the SCN of Cx36-deficient mice using luminometry and single-cell bioluminescence imaging. Surprisingly, we found that synchronization of circadian PER2 expression rhythms is maintained in SCN explants from Cx36-deficient mice. Since Cx36 expression levels change with age, we also tested circadian running-wheel behavior of juvenile (3-4weeks old) and adult (9-30weeks old) Cx36-deficient mice. We found that impact of connexin-36 expression on circadian behavior changes greatly during postnatal development. However, consistent with the intact synchrony among SCN cells in cultured explants, Cx36-deficient mice had intact locomotor circadian rhythms, although adults displayed a lengthened period in constant darkness. Our data indicate that even though Cx36 may be required for electrical coupling of SCN cells, it does not affect coupling of molecular clock gene rhythms. Thus, electrical coupling of neurons and coupling of circadian clock gene oscillations can be regulated independently in the SCN.


Subject(s)
Circadian Clocks/physiology , Circadian Rhythm/physiology , Connexins/deficiency , Period Circadian Proteins/metabolism , Suprachiasmatic Nucleus/metabolism , Adaptation, Physiological/physiology , Animals , Connexins/genetics , Female , Male , Mice, Transgenic , Suprachiasmatic Nucleus/growth & development , Tissue Culture Techniques , Gap Junction delta-2 Protein
5.
Zhongguo Zhong Yao Za Zhi ; 40(20): 3953-7, 2015 Oct.
Article in Chinese | MEDLINE | ID: mdl-27062808

ABSTRACT

The dynamic changes of germination percentage, germination potential, thousand-seed weight, antioxidase activity in Desmodium styracifolium seeds with different storage time were tested, and electrical conductivity, contents of soluble sugar, soluble protein, starch in seed leach liquor were also determined in order to reveal the mechanism of seed deterioration. The results as the following. (1) The germination percentage, germination potential and thousand-seed weight of D. styracifolium seeds declined, while the seed coat color darkened with the extension of storage time. (2) The activities of superoxide dismutase (SOD) and peroxidase (POD) decreased with the prolongation of storage period. The SOD activity declined fastest in 1,095-1,185 d of storage, while the POD activity declined significantly in 365-395 d of storage. (3) The electrical conductivity and the contents of soluble sugar, starch in seed leach liquor increased, while the content of soluble protein declined with the extension of storage time. (4) Correlation analysis indicated that the germination percentage, germination potential and thousand-seed weight of D. styracifolium seeds have a significantly positive correlation with SOD and POD activity, while have a significantly negative correlation with the electrical conductivity, contents of soluble sugar and starch. It can be concluded that during the storage of D. styracifolium seeds, physiological and biochemical changes including decrease in antioxidase activity, rise in electrical conductivity, degradation effluent of soluble sugar and starch, degradation of soluble protein were the main factors leading to the seed deterioration.


Subject(s)
Fabaceae/growth & development , Seeds/chemistry , Color , Fabaceae/chemistry , Fabaceae/enzymology , Fabaceae/metabolism , Germination , Peroxidases/metabolism , Plant Proteins/metabolism , Seeds/enzymology , Seeds/growth & development , Seeds/metabolism , Starch/metabolism , Superoxide Dismutase/metabolism , Time Factors
6.
Protein Expr Purif ; 107: 83-9, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25462811

ABSTRACT

Plant cytochrome P450 enzymes play vital roles in the biosynthesis of plant secondary metabolites, including phenylpropanoids and phytoalexins. Isoflavone-2'-hydroxylase (AmI2'H) from Astragalus membranaceus Bge. Var. mongolicus (Bge.) Hsiao is a membrane protein and an eukaryotic cytochrome P450 enzyme involved in isoflavonoid biosynthesis. We cloned the AmI2'H gene by employing RACE methods and modified the gene sequence to facilitate protein expression and increase protein solubility. Two vectors, pET-28a(+) and pCW ori(+), were used to express AmI2'H in Escherichia coli. The expression efficiency and purity of target protein were analyzed and demonstrated that pET-28a(+) vector containing the AmI2'H gene could produce larger amounts of target proteins with higher purity than pCWori(+). The purified proteins were identified as AmI2'H by LC-ESI-MS/MS analysis and their proper folding was assessed by CO difference spectrum.


Subject(s)
Astragalus propinquus/enzymology , Cloning, Molecular , Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/isolation & purification , Plant Proteins/genetics , Plant Proteins/isolation & purification , Amino Acid Sequence , Astragalus propinquus/chemistry , Astragalus propinquus/genetics , Cytochrome P-450 Enzyme System/metabolism , Molecular Sequence Data , Plant Proteins/chemistry , Plant Proteins/metabolism , Sequence Alignment
7.
Plant Cell ; 26(9): 3709-27, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25217505

ABSTRACT

The enzymes cinnamoyl-CoA reductase (CCR) and cinnamyl alcohol dehydrogenase (CAD) catalyze the two key reduction reactions in the conversion of cinnamic acid derivatives into monolignol building blocks for lignin polymers in plant cell walls. Here, we describe detailed functional and structural analyses of CCRs from Medicago truncatula and Petunia hybrida and of an atypical CAD (CAD2) from M. truncatula. These enzymes are closely related members of the short-chain dehydrogenase/reductase (SDR) superfamily. Our structural studies support a reaction mechanism involving a canonical SDR catalytic triad in both CCR and CAD2 and an important role for an auxiliary cysteine unique to CCR. Site-directed mutants of CAD2 (Phe226Ala and Tyr136Phe) that enlarge the phenolic binding site result in a 4- to 10-fold increase in activity with sinapaldehyde, which in comparison to the smaller coumaraldehyde and coniferaldehyde substrates is disfavored by wild-type CAD2. This finding demonstrates the potential exploitation of rationally engineered forms of CCR and CAD2 for the targeted modification of monolignol composition in transgenic plants. Thermal denaturation measurements and structural comparisons of various liganded and unliganded forms of CCR and CAD2 highlight substantial conformational flexibility of these SDR enzymes, which plays an important role in the establishment of catalytically productive complexes of the enzymes with their NADPH and phenolic substrates.


Subject(s)
Alcohol Oxidoreductases/chemistry , Aldehyde Oxidoreductases/chemistry , Lignin/biosynthesis , Medicago truncatula/enzymology , Petunia/enzymology , Propanols/metabolism , Alcohol Oxidoreductases/metabolism , Aldehyde Oxidoreductases/metabolism , Binding Sites , Biocatalysis , Cloning, Molecular , Crystallography, X-Ray , Cysteine/metabolism , Disulfides/metabolism , Esters/metabolism , Kinetics , Ligands , Lignin/chemistry , Models, Molecular , Mutant Proteins/chemistry , Mutant Proteins/metabolism , NADP/metabolism , Propanols/chemistry , Structural Homology, Protein , Substrate Specificity , Temperature
8.
Zhong Yao Cai ; 36(10): 1569-72, 2013 Oct.
Article in Chinese | MEDLINE | ID: mdl-24761663

ABSTRACT

OBJECTIVE: To study the effect of transplantation on the growth and oxymatrine content of Sophora flavescens and provide foundation for popularization and cultivation of Sophora flavescens in South China. METHODS: Sophora flavescens which was usually planted in North China and Northwest China was planted in a non-traditional location, Zhongshan city, Guangdong Province in South China to test its adaptability. The growth characters, such as plant height, leaf area, dry weight of root, diameter and length of root and so on were measured from 2010 to 2012. The oxymatrine content of one-year old and two-year old root of Sophora flavescens were determined by HPLC. Nine major growth indexes for one-year old Sophora flavescens were comprehensively analyzed and evaluated by the methods of weighted gray relational and hierarchy evaluation of fuzzy mathematics. RESULTS: The weighted relevancy of introduced and reference cultivars was 0.8545. The introduced cultivar was rather adaptable to the geography environment in Zhongshan. Its quality was very close to the reference cultivars. Oxymatrine content of root of one-year old and two-year old Sophora flavescens was 13.2784 mg/g (as much as origin) and 16.4779 mg/g (less than origin 28.67%), respectively. These were 10.65% and 37.32% higher than the quality standard which were set up in the Chinese Pharmacopoeia (2010 edition). CONCLUSION: Sophora flavescens performs quite well in the newly introducing region. It is suitable to be cultivated and extended in South China.


Subject(s)
Alkaloids/analysis , Chromatography, High Pressure Liquid/methods , Quinolizines/analysis , Sophora/chemistry , Sophora/growth & development , China , Climate , Ecosystem , Fertilizers , Plant Leaves/anatomy & histology , Plant Leaves/chemistry , Plant Leaves/growth & development , Plant Roots/anatomy & histology , Plant Roots/chemistry , Plant Roots/growth & development , Plants, Medicinal/chemistry , Plants, Medicinal/growth & development , Seasons , Sophora/anatomy & histology
9.
J Biol Rhythms ; 27(6): 443-52, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23223370

ABSTRACT

In mammals, the suprachiasmatic nucleus (SCN) is the central pacemaker organizing circadian rhythms of behavior and physiology. At the cellular level, the mammalian clock consists of autoregulatory feedback loops involving a set of "clock genes," including the Cryptochrome (Cry) genes, Cry1 and Cry2. Experimental evidence suggests that Cry1 and Cry2 play distinct roles in circadian clock function. In mice, Cry1 is required for sustained circadian rhythms in dissociated SCN neurons or fibroblasts but not in organotypic SCN slices or at the behavioral level, whereas Cry2 is not required at any of these levels. It has been argued that coupling among SCN cellular oscillators compensates for clock gene defects to preserve oscillatory function. Here we test this hypothesis in Cry1(-/-) mice by first disrupting intercellular coupling in vivo using constant light (resulting in behavioral arrhythmicity) and then examining circadian clock gene expression in SCN slices at the single cell level. In this manner, we were able to test the role of intercellular coupling without drugs and while preserving tissue organization, avoiding the confounding influences of more invasive manipulations. Cry1(-/-) mice (as well as control Cry2(-/-) mice) bearing the PER2::LUC knock-in reporter were transferred from a standard light:dark cycle to constant bright light (~650 lux) to induce arrhythmic locomotor patterns. In SCN slices from these animals, we used bioluminescence imaging to monitor PER2::LUC expression in single cells. We show that SCN slices from rhythmic Cry1(-/-) and Cry2(-/-) mice had similarly high percentages of functional single-cell oscillators. In contrast, SCN slices from arrhythmic Cry1(-/-) mice had significantly fewer rhythmic cells than SCN slices from arrhythmic Cry2(-/-) mice. Thus, constant light in vivo disrupted intercellular SCN coupling to reveal a cell-autonomous circadian defect in Cry1(-/-) cells that is normally compensated by intercellular coupling in vivo.


Subject(s)
Circadian Rhythm , Cryptochromes/physiology , Suprachiasmatic Nucleus/physiology , Animals , Genes, Reporter , Light , Male , Mice , Mice, Knockout , Period Circadian Proteins/metabolism , Photoperiod
10.
Chronobiol Int ; 29(6): 653-64, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22734566

ABSTRACT

The suprachiasmatic nucleus (SCN) of the hypothalamus synchronizes circadian rhythms of cells and tissues throughout the body. In SCN neurons, rhythms of clock gene expression are suppressed by manipulations that hyperpolarize the plasma membrane or lower intracellular Ca(2+). However, whether clocks in other cells also depend on membrane potential and calcium is unknown. In this study, the authors investigate the effects of membrane potential and intracellular calcium on circadian rhythms in mouse primary fibroblasts. Rhythms of clock gene expression were monitored using a PER2::LUC knockin reporter. Rhythms were lost or delayed at lower (hyperpolarizing) K(+) concentrations. Bioluminescence imaging revealed that this loss of rhythmicity in cultures was due to loss of rhythmicity of single cells rather than loss of synchrony among cells. In lower Ca(2+) concentrations, rhythms were advanced or had shorter periods. Buffering intracellular Ca(2+) by the calcium chelator 1,2-Bis(2-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid tetrakis acetoxymethyl ester (BAPTA-AM) or manipulation of inositol triphosphate (IP(3))-sensitive intracellular calcium stores by thapsigargin delayed rhythms. These results suggest that the circadian clock in fibroblasts, as in SCN neurons, is regulated by membrane potential and Ca(2+). Changes in intracellular Ca(2+) may mediate the effects of membrane potential observed in this study.


Subject(s)
Calcium/metabolism , Circadian Rhythm , Fibroblasts/metabolism , Intracellular Space/metabolism , Membrane Potentials , Period Circadian Proteins/metabolism , Animals , Cells, Cultured , Chelating Agents/pharmacology , Circadian Rhythm/drug effects , Circadian Rhythm/genetics , Egtazic Acid/analogs & derivatives , Egtazic Acid/pharmacology , Fibroblasts/cytology , Fibroblasts/drug effects , Gene Expression/genetics , Mice , Mice, Transgenic , Potassium/metabolism , Suprachiasmatic Nucleus/physiology
11.
Mol Biol Rep ; 39(3): 2275-83, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21647549

ABSTRACT

A chalcone reductase (CHR) gene was isolated from Astragalus membranaceus Bge. var. mongholicus (Bge.) Hsiao (A. mongholicus). The full-length cDNA of A. mongholicus CHR, designated as Amchr (GenBank accession No. HM357239), was 1196 bp long. It had a 957 bp open reading frame encoding a 318-amino acid protein of 35 kDa, a 67 bp 5' non-coding region and a 172 bp 3'-untranslated region. The putative AmCHR protein showed striking similarity to CHR from other leguminous species. Two-dimensional structure modeling showed that AmCHR consisted of 45.28% α-helix, 10.38% extended strand and 44.34% random coil. Prediction showed that three-dimensional AmCHR was a global protein containing an aldo-ket-red domain, with a putative Asp-Tyr-Lys-His catalytic tetrad in the center. The AmCHR gene was 1251 bp long, consisting of three exons and two introns. Intron I was 125 bp and intron II was 169 bp long. Southern blot analysis indicated that Amchr belonged to a small multigene family. Under natural conditions, Amchr was expressed differentially in the root, stem and leaf tissues of A. mongholicus, with a preferential expression in the root. The recombinant AmCHR protein was successfully expressed in Escherichia coli strain BL21 with pET42a vector. The result showed that the expressed AmCHR protein had molecular weight of about 35 kDa, which matched the size of the predicted protein by bioinformatic analysis. This study opened avenues towards understanding of the function of AmCHR protein and the role of the Amchr gene in the calycosin-7-O-ß-D: -glucoside branch pathway in A. mongholicus.


Subject(s)
Alcohol Oxidoreductases/genetics , Alcohol Oxidoreductases/metabolism , Astragalus propinquus/enzymology , Base Sequence , Blotting, Southern , Cloning, Molecular , Computational Biology , DNA, Complementary/genetics , Gene Expression Profiling , Molecular Sequence Data , Molecular Structure , Sequence Analysis, DNA
12.
Physiol Plant ; 142(3): 265-73, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21438882

ABSTRACT

Isoflavonoids are a group of phenolic secondary metabolites found almost exclusively in leguminous plants. Formononetin, calycosin and calycosin-7-O-ß-d-glucoside (CG) are isoflavonoid products in the CG pathway. Accumulation of the three isoflavonoids plus daidzein and expression of six genes of enzymes involved in the CG pathway were studied in Astragalus membranaceus Bge. var. mongholicus (Bge.) Hsiao with ultraviolet (UV) irradiation. Our results showed that (1) main isoflavonoids in roots, stems and leaves were CG, daidzein and calycosin, respectively; they accumulated significantly under the induction of UV irradiation during 8 days but their content declined later; (2) expression of six genes of enzymes involved in the CG pathway was inhibited slightly at early stage but the expression was increased greatly afterward; (3) chalcone synthase, chalcone reductase and chalcone isomerase were expressed to their individual maximum level within shorter hours than were cinnamate 4-hydroxylase, isoflavone synthase (IFS) and isoflavone 3'-hydroxylase and (4) more calycosin but less daidzein accumulated in leaves. IFS was highly expressed in leaves, which might lead to high accumulation of the common precursor of daidzein and 2,7-dihydroxy-4'-O-methoxy-isoflavanone, the latter of which would be converted to formononetin, calycosin and CG via a series of reactions. Little daidzein accumulated in leaves, which suggested that rather than be converted to daidzein, the 2,7,4'-trihydroxyisoflavanone was probably more easily caught by 2-hydroxyisoflavanone 4'-O-methyltransferase and hence provided more precursors for formononetin. The findings were discussed in terms of the influence of UV irradiation in the accumulation of isoflavonoids.


Subject(s)
Astragalus propinquus/enzymology , Astragalus propinquus/genetics , Gene Expression Regulation, Plant/radiation effects , Glucosides/metabolism , Isoflavones/metabolism , Transcription, Genetic/radiation effects , Ultraviolet Rays , Astragalus propinquus/radiation effects , Biosynthetic Pathways/radiation effects , Chromatography, High Pressure Liquid , Genes, Plant/genetics , Metabolic Networks and Pathways/genetics , Metabolic Networks and Pathways/radiation effects , Plant Leaves/genetics , Plant Leaves/radiation effects , Plant Proteins/genetics , Plant Proteins/metabolism , Reverse Transcriptase Polymerase Chain Reaction
13.
Circ Res ; 105(6): 549-56, 2009 Sep 11.
Article in English | MEDLINE | ID: mdl-19679840

ABSTRACT

RATIONALE: Disruption of endothelial barrier function and neutrophil-mediated injury are two major mechanisms underlying the pathophysiology of sepsis-induced acute lung injury (ALI). Recently we reported that endotoxin induced activation of RhoA in mice lungs that led to the disruption of endothelial barrier and lung edema formation; however, the molecular mechanism of this phenomenon remained unknown. OBJECTIVE: We reasoned that LIMK1, which participates in the regulation of endothelial cell contractility and is activated by RhoA/Rho kinase pathway, could mediate RhoA-dependent disruption of endothelial barrier function in mouse lungs during ALI. And if that is the case, then attenuation of endothelial cell contractility by downregulating LIMK1 may lead to the enhancement of endothelial barrier function, which could protect mice from endotoxin-induced ALI. METHODS AND RESULTS: Here we report that LIMK1 deficiency in mice significantly reduced mortality induced by endotoxin. Data showed that lung edema formation, lung microvascular permeability, and neutrophil infiltration into the lungs were suppressed in limk1(-/-) mice. CONCLUSIONS: We identified that improvement of endothelial barrier function along with impaired neutrophil chemotaxis were the underlying mechanisms that reduced severity of ALI in limk1(-/-) mice, pointing to a new therapeutic target for diseases associated with acute inflammation of the lungs.


Subject(s)
Acute Lung Injury/enzymology , Endothelium/enzymology , Lim Kinases/metabolism , Neutrophil Infiltration , Neutrophils/enzymology , Sepsis/enzymology , Acute Lung Injury/chemically induced , Acute Lung Injury/genetics , Animals , Chemotaxis/drug effects , Endothelium/pathology , Humans , Lim Kinases/genetics , Lipopolysaccharides/toxicity , Lung/enzymology , Lung/pathology , Mice , Mice, Knockout , Neutrophils/pathology , Pulmonary Edema/chemically induced , Pulmonary Edema/enzymology , Pulmonary Edema/genetics , Sepsis/chemically induced , Sepsis/genetics , rho GTP-Binding Proteins/genetics , rho GTP-Binding Proteins/metabolism , rho-Associated Kinases/metabolism , rhoA GTP-Binding Protein
14.
J Mol Biol ; 392(5): 1292-302, 2009 Oct 09.
Article in English | MEDLINE | ID: mdl-19683002

ABSTRACT

The glycosyltransferase UGT78G1 from Medicago truncatula catalyzes the glycosylation of various (iso)flavonoids such as the flavonols kaempferol and myricetin, the isoflavone formononetin, and the anthocyanidins pelargonidin and cyanidin. It also catalyzes a reverse reaction to remove the sugar moiety from glycosides. The structures of UGT78G1 bound with uridine diphosphate or with both uridine diphosphate and myricetin were determined at 2.1 A resolution, revealing detailed interactions between the enzyme and substrates/products and suggesting a distinct binding mode for the acceptor/product. Comparative structural analysis and mutagenesis identify glutamate 192 as a key amino acid for the reverse reaction. This information provides a basis for enzyme engineering to manipulate substrate specificity and to design effective biocatalysts with glycosylation and/or deglycosylation activity.


Subject(s)
Flavonoids/metabolism , Glycosyltransferases/chemistry , Glycosyltransferases/metabolism , Medicago truncatula/enzymology , Crystallography, X-Ray , Glycosylation , Models, Molecular , Mutagenesis, Site-Directed , Protein Binding , Protein Structure, Tertiary
15.
J Exp Bot ; 59(11): 3027-37, 2008.
Article in English | MEDLINE | ID: mdl-18583351

ABSTRACT

Previously it had been shown that calycosin and calycosin-7-O-beta-D-glucoside (CGs) accumulate in whole plants, mainly in leaves, of Astragalus membranaceus Bge. var. mongholicus (Bge.) Hsiao (A. mongholicus) plants in response to low temperature. In this work, it was demonstrated that the influences of different conditions on CGs biosynthesis, by examining the changes in CGs content, as well as the expression of related genes, including phenylalanine ammonia lyase (PAL1), cinnamic acid 4-hydroxylase (C4H), chalcone synthase (CHS), chalcone reductase (CHR), chalcone isomerase (CHI), isoflavone synthase (IFS), and isoflavone 3'-hydroxylase (I3'H). The seven gene mRNAs accumulated in leaves of A. mongholicus upon exposure to low temperature in a light-dependent manner, though they exhibited different expression patterns. Transcriptions of CHS, CHR, CHI, IFS, and I3'H of the calycosin-7-O-beta-D-glucoside pathway were all up-regulated when plants were transferred from 16 degrees C to 2 degrees C or 25 degrees C or from 2 degrees C (kept for 24 h) to 25 degrees C. However, fluctuations in temperature influenced differently the transcriptions of PAL1 and C4H of the general phenylpropanoid pathway in leaves. Moreover, the amount of PAL1 expression changed sharply up and down, consistent with the variation of the content of CGs. PAL enzyme activity appears to be the limiting factor in determining the CGs levels. The inhibitor of PAL enzyme, L-alpha-aminooxy-beta-phenylpropionic acid, almost entirely shut down CGs accumulation at low temperature. All these results confirmed that PAL1, as a smart gene switch, directly controls the accumulation of CGs in A. mongholicus plants, in a light-dependent manner, during low temperature treatment.


Subject(s)
Astragalus Plant/enzymology , Glucosides/biosynthesis , Isoflavones/biosynthesis , Phenylalanine Ammonia-Lyase/metabolism , Alcohol Oxidoreductases/genetics , Astragalus Plant/genetics , Cold Temperature , DNA, Complementary/isolation & purification , Gene Expression Regulation, Plant , Intramolecular Lyases/genetics , Light , Phenylalanine/analogs & derivatives , Phenylalanine/pharmacology , Phenylalanine Ammonia-Lyase/antagonists & inhibitors , Phenylalanine Ammonia-Lyase/genetics , RNA, Messenger/metabolism , Trans-Cinnamate 4-Monooxygenase/genetics
16.
Sheng Wu Gong Cheng Xue Bao ; 23(2): 206-10, 2007 Mar.
Article in Chinese | MEDLINE | ID: mdl-17460889

ABSTRACT

S-adenosylmethionine-dependent uroporphyrinogen III methyltransferase (SUMT) is a novel red fluorescence indicator. However, the production of SUMT in Escherichia coli is restricted by its relatively low solubility, and little is known about the red fluorescent materials that are associate with SUMT. Two individual SUMT mutations, L166A and L88R/L89G double mutant were produced by site-directed mutagenesis. Both mutants were overexpressed in E. coli and purified by Ni-NTA chromatography. The reddish mixtures isolated from the purified L88R/L89G double mutant were analyzed by UV-visible spectra scanning and mass analysis(MS). The L88R/L89G double mutant has enzymatic activity in vivo, whereas L166A mutant loses the activity. Trimethylpyrrocorphin is identified as the main constituent in the isolated pigments. The purified L88R/L89G mutant increases protein solubility, which is applied potentially as the fluorescent indicator denoting the solubility of protein fusion partner.


Subject(s)
Methyltransferases/metabolism , Mutagenesis, Site-Directed/methods , Plant Proteins/metabolism , Zea mays/enzymology , Amino Acid Substitution , Electrophoresis, Polyacrylamide Gel , Escherichia coli/genetics , Fluorescence , Mass Spectrometry , Methyltransferases/chemistry , Methyltransferases/genetics , Molecular Weight , Mutation , Pigments, Biological/chemistry , Pigments, Biological/metabolism , Plant Proteins/chemistry , Plant Proteins/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Solubility , Spectrophotometry, Ultraviolet , Zea mays/genetics
17.
Plant Cell Rep ; 26(7): 1111-20, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17253088

ABSTRACT

The changes in calycosin and calycosin-7-O-beta-D-glucoside content as well as the expression of genes involved in their biosynthesis were monitored in roots, stems and leaves of Astragalus membranaceus Bge. var. mongholicus (Bge.) Hsiao seedlings during 10 days of low temperature treatment. The concentrations of calycosin and its 7-O-beta-D-glucoside in the different tissues were analyzed using high-performance liquid chromatography. Higher glycoside contents were observed at 2 degrees C than that at 16 degrees C in all the tested tissues, however, the aglycone was scarcely detected in both leaves and stems at either 16 or 2 degrees C. cDNA fragments encoding four structural genes from the calycosin pathway, namely chalcone synthase, isoflavone synthase, isoflavone 3'-hydroxylase and UDP-glucose: calycosin-7-O-glucosyltransferase were isolated from A. membranaceus var. mongholicus seedlings by polymerase chain reaction (PCR) and sequenced. Real-time quantitative reverse transcript PCR demonstrated that in leaves and stems, five genes (including phenylalanine ammonia lyase), exhibited clear differences in their accumulation pattern in response to a low temperature stress, which was consistent with the increased content of calycosin-7-O-beta-D-glucoside. In the roots, transcription of the five genes was down-regulated at 2 degrees C, but the contents of calycosin and its glucosides were higher than that at 16 degrees C. These findings indicate that low temperature stress could induce accumulation of calycosin and its glucosides in different tissues of the seedlings of A. membranaceus var. mongholicus but the mechanisms regulating the accumulation were different.


Subject(s)
Astragalus Plant/genetics , Astragalus Plant/metabolism , Cold Temperature , Gene Expression Regulation, Plant , Isoflavones/metabolism , Seedlings/genetics , Seedlings/metabolism , DNA, Complementary/genetics , DNA, Complementary/metabolism , DNA, Plant/genetics , Isoflavones/biosynthesis , Isoflavones/genetics , Molecular Structure , Plant Leaves/metabolism , Plant Roots/metabolism , Plant Stems/metabolism , Time Factors , Up-Regulation
18.
Endocrinology ; 146(10): 4274-80, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16002526

ABSTRACT

IGF binding protein-1 (IGFBP-1) gene expression is stimulated by glucocorticoids and suppressed by insulin in the liver. Insulin response sequences (IRSs) mediate effects of insulin on basal promoter function, whereas glucocorticoids stimulate promoter activity through a contiguous glucocorticoid response element. Here we examined the role of IRS-dependent and -independent mechanisms in mediating insulin and glucocorticoids effects on IGFBP-1 promoter activity. Dexamethasone (Dex) stimulates IGFBP-1 promoter activity in HepG2 cells, and mutation of IRSs reduces this effect, indicating that IRS-associated factors enhance glucocorticoid effects on promoter function. Conversely, insulin inhibits basal promoter activity by 40% and Dex-stimulated promoter activity by 65%, indicating that glucocorticoids enhance the ability of insulin to suppress promoter activity. Mutation of IRSs completely disrupts the insulin effect on basal promoter activity and reduces but does not abolish inhibition of Dex-stimulated promoter activity, indicating that insulin suppresses glucocorticoid-stimulated promoter activity through both IRS-dependent and -independent mechanisms. IRS-independent effects of insulin are context dependent because insulin does not suppress glucocorticoid-stimulated activity of a promoter containing multiple glucocorticoid response elements. Cotransfection studies indicate that suppression of peroxisomal proliferator-activated receptor-gamma coactivator-1alpha, an insulin-regulated coactivator of the glucocorticoid receptor, is not required for this effect of insulin. Studies with pharmacological inhibitors indicate that both phosphatidylinositol-3' kinase and mitogen-activated kinase kinase pathways contribute to IRS-independent effects. These studies indicate that glucocorticoids and IRS-associated factors function together to mediate effects of insulin and glucocorticoids on promoter activity and that glucocorticoid treatment creates a complex environment in which insulin regulates IGFBP-1 expression through both IRS-dependent and IRS-independent mechanisms.


Subject(s)
Glucocorticoids/pharmacology , Insulin-Like Growth Factor Binding Protein 1/genetics , Insulin/pharmacology , Cell Line, Tumor , Dexamethasone/pharmacology , Gene Expression Regulation/drug effects , Humans , Insulin-Like Growth Factor Binding Protein 1/chemistry , Promoter Regions, Genetic/drug effects , Restriction Mapping , Transfection
19.
Biochem J ; 378(Pt 3): 839-49, 2004 Mar 15.
Article in English | MEDLINE | ID: mdl-14664696

ABSTRACT

FOXO1, a Forkhead transcription factor, is an important target of insulin and growth factor action. Phosphorylation of Thr-24, Ser-256 and Ser-319 promotes nuclear exclusion of FOXO1, yet the mechanisms regulating nuclear/cytoplasmic shuttling of FOXO1 are poorly understood. Previous studies have identified an NLS (nuclear localization signal) in the C-terminal basic region of the DBD (DNA-binding domain), and a leucine-rich, leptomycin-B sensitive NES (nuclear export signal) located further downstream. Here, we find that other elements in the DBD also contribute to nuclear localization, and that multiple mechanisms contribute to nuclear exclusion of FOXO1. Phosphorylation of Ser-319 and a cluster of nearby residues (Ser-322, Ser-325 and Ser-329) functions co-operatively with the nearby NES to promote nuclear exclusion. The N-terminal region of FOXO1 (amino acids 1-149) also is sufficient to promote nuclear exclusion, and does so through multiple mechanisms. Amino acids 1-50 are sufficient to promote nuclear exclusion of green fluorescent protein fusion proteins, and the phosphorylation of Thr-24 is required for this effect. A leucine-rich, leptomycin B-sensitive export signal is also present nearby. Phosphorylated FOXO1 binds 14-3-3 proteins, and co-precipitation studies with tagged proteins indicate that 14-3-3 binding involves co-operative interactions with both Thr-24 and Ser-256. Ser-256 is located in the C-terminal region of the DBD, where 14-3-3 proteins may interfere both with DNA-binding and with nuclear-localization functions. Together, these studies demonstrate that multiple elements contribute to nuclear/cytoplasmic shuttling of FOXO1, and that phosphorylation and 14-3-3 binding regulate the cellular distribution and function of FOXO1 through multiple mechanisms. The presence of these redundant mechanisms supports the concept that the regulation of FOXO1 function plays a critical role in insulin and growth factor action.


Subject(s)
Cell Nucleus/metabolism , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/metabolism , Transcription Factors/chemistry , Transcription Factors/metabolism , Tyrosine 3-Monooxygenase/metabolism , 14-3-3 Proteins , Active Transport, Cell Nucleus , Cell Line , Cell Nucleus/chemistry , Cytoplasm/chemistry , Cytoplasm/metabolism , Forkhead Box Protein O1 , Forkhead Transcription Factors , Humans , Nuclear Localization Signals , Phosphorylation , Protein Sorting Signals , Protein Structure, Tertiary , Serine/physiology , Threonine/metabolism
20.
Circ Res ; 93(9): 848-56, 2003 Oct 31.
Article in English | MEDLINE | ID: mdl-14512443

ABSTRACT

Rho GTPases integrate the intracellular signaling in a wide range of cellular processes. Activation of these G proteins is tightly controlled by a number of guanine nucleotide exchange factors (GEFs). In this study, we addressed the functional role of the recently identified p114RhoGEF in in vivo experiments. Activation of endogenous G protein-coupled receptors with lysophosphatidic acid resulted in activation of a transcription factor, serum response element (SRE), that was enhanced by p114RhoGEF. This stimulation was inhibited by the functional scavenger of Gbetagamma subunits, transducin. We have determined that Gbetagamma subunits but not Galpha subunits of heterotrimeric G proteins stimulated p114RhoGEF-dependent SRE activity. Using coimmunoprecipitation assay, we have determined that Gbetagamma subunits interacted with full-length and DH/PH domain of p114RhoGEF. Similarly, Gbetagamma subunits stimulated SRE activity induced by full-length and DH/PH domain of p114RhoGEF. Using in vivo pull-down assays and dominant-negative mutants of Rho GTPases, we have determined that p114RhoGEF activated RhoA and Rac1 but not Cdc42 proteins. Functional significance of RhoA activation was established by the ability of p114RhoGEF to induce actin stress fibers and cell rounding. Functional significance of Rac1 activation was established by the ability of p114RhoGEF to induce production of reactive oxygen species (ROS) followed by activation of NADPH oxidase enzyme complex. In summary, our data showed that the novel guanine nucleotide exchange factor p114RhoGEF regulates the activity of RhoA and Rac1, and that Gbetagamma subunits of heterotrimeric G proteins are activators of p114RhoGEF under physiological conditions. The findings help to explain the integrated effects of LPA and other G-protein receptor-coupled agonists on actin stress fiber formation, cell shape change, and ROS production.


Subject(s)
GTP-Binding Protein beta Subunits/metabolism , GTP-Binding Protein gamma Subunits/metabolism , Guanine Nucleotide Exchange Factors/metabolism , rac1 GTP-Binding Protein/metabolism , rhoA GTP-Binding Protein/metabolism , Actins/metabolism , Alternative Splicing , Animals , Cell Line , Cell Size/drug effects , Cell Size/physiology , GTP-Binding Protein beta Subunits/pharmacology , GTP-Binding Protein gamma Subunits/pharmacology , Genes, Reporter , Guanine Nucleotide Exchange Factors/deficiency , Guanine Nucleotide Exchange Factors/drug effects , Guanine Nucleotide Exchange Factors/genetics , Humans , Lysophospholipids/pharmacology , Mice , NADPH Oxidases/metabolism , NIH 3T3 Cells , Organ Specificity , Phosphoproteins/metabolism , Protein Structure, Tertiary/physiology , RNA, Messenger/analysis , RNA, Messenger/biosynthesis , Reactive Oxygen Species/metabolism , Rho Guanine Nucleotide Exchange Factors , Serum Response Element/genetics , Stress Fibers/drug effects , Stress Fibers/metabolism , Thrombin/pharmacology , cdc42 GTP-Binding Protein/metabolism
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