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1.
JCO Clin Cancer Inform ; 6: e2200016, 2022 09.
Article in English | MEDLINE | ID: mdl-36179281

ABSTRACT

PURPOSE: There is ongoing clinical need to improve estimates of disease outcome in prostate cancer. Machine learning (ML) approaches to pathologic diagnosis and prognosis are a promising and increasingly used strategy. In this study, we use an ML algorithm for prediction of adverse outcomes at radical prostatectomy (RP) using whole-slide images (WSIs) of prostate biopsies with Grade Group (GG) 2 or 3 disease. METHODS: We performed a retrospective review of prostate biopsies collected at our institution which had corresponding RP, GG 2 or 3 disease one or more cores, and no biopsies with higher than GG 3 disease. A hematoxylin and eosin-stained core needle biopsy from each site with GG 2 or 3 disease was scanned and used as the sole input for the algorithm. The ML pipeline had three phases: image preprocessing, feature extraction, and adverse outcome prediction. First, patches were extracted from each biopsy scan. Subsequently, the pre-trained Visual Geometry Group-16 convolutional neural network was used for feature extraction. A representative feature vector was then used as input to an Extreme Gradient Boosting classifier for predicting the binary adverse outcome. We subsequently assessed patient clinical risk using CAPRA score for comparison with the ML pipeline results. RESULTS: The data set included 361 WSIs from 107 patients (56 with adverse pathology at RP). The area under the receiver operating characteristic curves for the ML classification were 0.72 (95% CI, 0.62 to 0.81), 0.65 (95% CI, 0.53 to 0.79) and 0.89 (95% CI, 0.79 to 1.00) for the entire cohort, and GG 2 and GG 3 patients, respectively, similar to the performance of the CAPRA clinical risk assessment. CONCLUSION: We provide evidence for the potential of ML algorithms to use WSIs of needle core prostate biopsies to estimate clinically relevant prostate cancer outcomes.


Subject(s)
Prostate , Prostatic Neoplasms , Biopsy , Biopsy, Large-Core Needle , Eosine Yellowish-(YS) , Hematoxylin , Humans , Machine Learning , Male , Prostate/pathology , Prostate/surgery , Prostatectomy , Prostatic Neoplasms/diagnosis , Prostatic Neoplasms/pathology , Prostatic Neoplasms/surgery
2.
Mod Pathol ; 35(10): 1411-1422, 2022 10.
Article in English | MEDLINE | ID: mdl-35562413

ABSTRACT

Rare cases of human herpesvirus 8 (HHV8)-negative effusion-based large B-cell lymphoma (EB-LBCL) occur in body cavities without antecedent or concurrent solid mass formation. In contrast to HHV8 + primary effusion lymphoma (PEL), EB-LBCL has no known association with HIV or HHV8 infection. However, the small sample sizes of case reports and series worldwide, especially from non-Japanese regions, have precluded diagnostic uniformity. Therefore, we conducted a retrospective, multi-institutional study of 55 cases of EB-LBCL and performed a comprehensive review of an additional 147 cases from the literature to identify distinct clinicopathologic characteristics. In our study, EB-LBCL primarily affected elderly (median age 80 years), immunocompetent patients and manifested as lymphomatous effusion without a solid component. The lymphomatous effusions mostly occurred in the pleural cavity (40/55, 73%), followed by the pericardial cavity (17/55, 31%). EB-LBCL expressed CD20 (53/54, 98%) and PAX5 (23/23, 100%). Most cases (30/36, 83%) were of non-germinal center B-cell subtype per the Hans algorithm. HHV8 infection was absent (0/55, 0%), while Epstein-Barr virus was detected in 6% (3/47). Clinically, some patients were managed with drainage alone (15/34, 44%), while others received rituximab alone (4/34, 12%) or chemotherapy (15/34, 44%). Eventually, 56% (22/39) died with a median overall survival (OS) of 14.9 months. Our findings were similar to those from the literature; however, compared to the non-Japanese cases, the Japanese cases had a significantly higher incidence of pericardial involvement, a higher rate of chemotherapy administration, and longer median OS. Particularly, we have found that Japanese residence, presence of pericardial effusion, and absence of MYC rearrangement are all favorable prognostic factors. Our data suggest that EB-LBCL portends a worse prognosis than previously reported, although select patients may be managed conservatively. Overall, EB-LBCL has distinct clinicopathologic characteristics, necessitating the establishment of separate diagnostic criteria and consensus nomenclature.


Subject(s)
Epstein-Barr Virus Infections , Herpesviridae Infections , Herpesvirus 8, Human , Lymphoma, Large B-Cell, Diffuse , Lymphoma, Primary Effusion , Aged , Aged, 80 and over , Epstein-Barr Virus Infections/complications , Herpesviridae Infections/complications , Herpesvirus 4, Human , Humans , Lymphoma, Large B-Cell, Diffuse/pathology , Lymphoma, Primary Effusion/diagnosis , Lymphoma, Primary Effusion/pathology , Retrospective Studies , Rituximab
3.
Arch Pathol Lab Med ; 146(2): 201-204, 2022 01 02.
Article in English | MEDLINE | ID: mdl-34015819

ABSTRACT

CONTEXT.­: Multiparametric magnetic resonance imaging (mpMRI) of prostate with targeted biopsy has enhanced detection of high-grade prostatic adenocarcinoma (HG PCa). However, utility of amount of HG PCa (Gleason pattern 4/5) in mpMRI-targeted biopsies versus standard 12-core biopsies in predicting adverse outcomes on radical prostatectomy (RP) is unknown. OBJECTIVE.­: To examine the utility of amount of HG PCa in mpMRI-targeted biopsies versus standard 12-core biopsies in predicting adverse RP outcomes. DESIGN.­: We performed a retrospective review of prostate biopsies that had corresponding RP, 1 or more mpMRI-targeted biopsy, and Grade Group 2 disease or higher. For the 169 cases identified, total millimeters of carcinoma and HG PCa and longest length HG PCa in a single core were recorded for 12-core biopsies and each set of mpMRI-targeted biopsies. For RP specimens, Gleason grade, extraprostatic extension, seminal vesicle involvement, and lymph node metastasis were recorded. The main outcome studied was prostate-confined disease at RP. A logistic regression model was used to test which pre-RP variables related to this outcome. RESULTS.­: Univariate analysis showed significant associations with adverse RP outcomes in 5 of 8 quantifiable variables; longest millimeter HG PCa in a single 12-core biopsy, highest Grade Group in any core, and total millimeter HG in mpMRI-targeted biopsies showed no statistical association (P = .54, P = .13, and P = .55, respectively). In multivariate analysis, total millimeter carcinoma in all cores, highest Grade Group in any core, and longest millimeter HG PCa in a single mpMRI-targeted core provided additional predictive value (P < .001, P = .004, and P = .03, respectively). CONCLUSIONS.­: Quantitation of HG PCa in mpMRI-targeted biopsies provides additional value over 12-core biopsies alone in predicting nonorgan confined prostate cancer at RP. Linear millimeters of HG PCa in mpMRI-targeted biopsies is a significant parameter associated with higher pathologic stage and could be of value in risk models.


Subject(s)
Adenocarcinoma , Multiparametric Magnetic Resonance Imaging , Prostatic Neoplasms , Adenocarcinoma/diagnostic imaging , Biopsy , Humans , Image-Guided Biopsy/methods , Magnetic Resonance Imaging/methods , Male , Neoplasm Grading , Prostatic Neoplasms/pathology
4.
Case Rep Urol ; 2021: 2687416, 2021.
Article in English | MEDLINE | ID: mdl-33936831

ABSTRACT

The utility of serial Decipher biopsy scores in a true active surveillance population is still unknown. In a man on active surveillance for low-risk prostate cancer, a doubling of the Decipher biopsy score within genomic low-risk category from first to the second biopsy related to biopsy reclassification to Gleason grade group 4 on the third biopsy. However, the final pathology at radical prostatectomy showed Gleason grade group 2 with an organ-confined disease. This case suggests that the genomic risk category of Decipher biopsy scores during active surveillance may be more informative than either the interval genomic score change or the biopsy Gleason grade group.

7.
Am J Trop Med Hyg ; 103(4): 1590-1592, 2020 10.
Article in English | MEDLINE | ID: mdl-32830642

ABSTRACT

The SARS-CoV-2 virus has emerged and rapidly evolved into a current global pandemic. Although bacterial and fungal coinfections have been associated with COVID-19, little is known about parasitic infection. We report a case of a COVID-19 patient who developed disseminated strongyloidiasis following treatment with high-dose corticosteroids and tocilizumab. Screening for Strongyloides infection should be pursued in individuals with COVID-19 who originate from endemic regions before initiating immunosuppressive therapy.


Subject(s)
Coronavirus Infections/parasitology , Diabetes Mellitus/parasitology , Hypertension/parasitology , Peripheral Nervous System Diseases/parasitology , Pneumonia, Viral/parasitology , Strongyloides stercoralis/pathogenicity , Strongyloidiasis/parasitology , Adrenal Cortex Hormones/administration & dosage , Aged , Animals , Anthelmintics/therapeutic use , Antibodies, Monoclonal, Humanized/administration & dosage , Betacoronavirus/pathogenicity , COVID-19 , Coinfection , Connecticut , Coronavirus Infections/drug therapy , Coronavirus Infections/immunology , Coronavirus Infections/virology , Diabetes Mellitus/drug therapy , Diabetes Mellitus/immunology , Diabetes Mellitus/virology , Ecuador , Humans , Hypertension/drug therapy , Hypertension/immunology , Hypertension/virology , Immunologic Factors/administration & dosage , Male , Pandemics , Peripheral Nervous System Diseases/drug therapy , Peripheral Nervous System Diseases/immunology , Peripheral Nervous System Diseases/virology , Pneumonia, Viral/drug therapy , Pneumonia, Viral/immunology , Pneumonia, Viral/virology , SARS-CoV-2 , Strongyloidiasis/drug therapy , Strongyloidiasis/immunology , Strongyloidiasis/virology
9.
Yale J Biol Med ; 93(1): 35-40, 2020 03.
Article in English | MEDLINE | ID: mdl-32226333

ABSTRACT

Intravascular large B-cell lymphoma (IVLBCL) is a rare subset of extranodal non-Hodgkin lymphoma characterized by neoplastic lymphocytes within the lumina of small to medium-sized blood vessels. IVLBCLs are B-cell tumors that can present in essentially any organ system, including the skin. Cutaneous manifestations vary greatly and can mimic other skin disease which may delay diagnosis; in the absence of skin lesions, blind skin biopsies can be utilized for diagnosis. Early studies suggested that IVLBCL is a very aggressive lymphoma with high overall mortality rate and short survival times. However, earlier diagnosis and use of new treatment modalities have shown promise in recent studies. This case series illustrates the heterogeneity of clinical and pathologic presentations of this uncommon lymphoma.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/administration & dosage , Biopsy/methods , Blood Vessels/pathology , Lymphoma, Large B-Cell, Diffuse , Skin Neoplasms , Skin , Aged , Carmustine/administration & dosage , Cyclophosphamide/administration & dosage , Cytarabine/administration & dosage , Delayed Diagnosis/prevention & control , Diagnosis, Differential , Doxorubicin/administration & dosage , Early Detection of Cancer , Female , Humans , Lymphoma, Large B-Cell, Diffuse/pathology , Lymphoma, Large B-Cell, Diffuse/physiopathology , Lymphoma, Large B-Cell, Diffuse/therapy , Male , Melphalan/administration & dosage , Podophyllotoxin/administration & dosage , Prednisone/administration & dosage , Rituximab/administration & dosage , Skin/blood supply , Skin/pathology , Skin Neoplasms/pathology , Skin Neoplasms/physiopathology , Skin Neoplasms/therapy , Treatment Outcome , Vincristine/administration & dosage
10.
J Cutan Pathol ; 46(10): 794-797, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31148238

ABSTRACT

Perianal keratoacanthomas are rare, with 10 cases reported to date. Perineal keratoacanthoma has not previously been described. In this report, we describe two cases of keratoacanthoma, one perianal and one perineal. Both lesions show prominent dyskeratotic keratinocytes, with striking and curious histologic resemblance to subungual keratoacanthoma.


Subject(s)
Anal Canal , Keratoacanthoma , Nail Diseases , Aged , Anal Canal/metabolism , Anal Canal/pathology , Diagnosis, Differential , Female , Humans , Keratoacanthoma/diagnosis , Keratoacanthoma/metabolism , Keratoacanthoma/pathology , Male , Nail Diseases/diagnosis , Nail Diseases/metabolism , Nail Diseases/pathology
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