ABSTRACT
A high-yielding synthesis of a series of polyimide dendrimers, including decacyclene- and perylene-containing dendrimer D6, in which two types of polyimide dyes are present, is reported. In these constructs, the branching unit is represented by trisphenylamine, and the solubilizing chains by N-9-heptadecanyl-substituted perylene diimides. The photophysical properties of the dendrimers have been studied by absorption, steady-state, and time-resolved emission spectroscopy and pump-probe transient absorption spectroscopy. Photoinduced charge-separated (CS) states are formed on the femtosecond timescale upon visible excitation. In particular, in D6, two different CS states can be formed, involving different subunits that decays independently with different lifetimes (ca. 10-100â ps).
ABSTRACT
Metal ion interactions with DNA have far-reaching implications in biochemistry and DNA nanotechnology. Ag(+) is uniquely interesting because it binds exclusively to the bases rather than the backbone of DNA, without the toxicity of Hg(2+). In contrast to prior studies of Ag(+) incorporation into double-stranded DNA, we remove the constraints of Watson-Crick pairing by focusing on homo-base DNA oligomers of the canonical bases. High resolution electro-spray ionization mass spectrometry reveals an unanticipated Ag(+)-mediated pairing of guanine homo-base strands, with higher stability than canonical guanine-cytosine pairing. By exploring unrestricted binding geometries, quantum chemical calculations find that Ag(+) bridges between non-canonical sites on guanine bases. Circular dichroism spectroscopy shows that the Ag(+)-mediated structuring of guanine homobase strands persists to at least 90 °C under conditions for which canonical guanine-cytosine duplexes melt below 20 °C. These findings are promising for DNA nanotechnology and metal-ion based biomedical science.
Subject(s)
Base Pairing/genetics , DNA/chemistry , Nucleic Acid Conformation , Silver/chemistry , Circular Dichroism , Cytosine/chemistry , Guanine/chemistry , Models, Molecular , Nanotechnology , Spectrometry, Mass, Electrospray Ionization , ThermodynamicsABSTRACT
Tumor-homing peptides with tissue-penetrating properties increase the efficacy of targeted cancer therapy by delivering an anticancer agent to the tumor interior. LyP-1 (CGNKRTRGC) and iRGD (CRGDKGPDC) are founding members of this class of peptides. The presence of the cysteines forming the cyclizing disulfide bond complicates conjugation of these peptides with other molecules, such as drugs. Here, we report the synthesis of conjugatable disulfide-bridged peptides and their conjugation to biologically important molecules. We have synthesized the LyP-1, iRGD, and CRGDC (GACRGDCLGA) peptides with a cysteine or maleimidohexanoic acid added externally at N-terminus of the sequences. Subsequent conjugation to payloads yielded stable compounds in which the tumor-homing properties of the peptide and the biological activity of the payload were retained.
ABSTRACT
DNA-stabilized silver clusters are remarkable for the selection of fluorescence color by the sequence of the stabilizing DNA oligomer. Yet despite a growing number of applications that exploit this property, no large-scale studies have probed origins of cluster color or whether certain colors occur more frequently than others. Here we employ a set of 684 randomly chosen 10-base oligomers to address these questions. Rather than a flat distribution, we find that specific color bands dominate. Cluster size data indicate that these "magic colors" originate from the existence of magic numbers for DNA-stabilized silver clusters, which differ from those of spheroidal gold clusters stabilized by small-molecule ligands. Elongated cluster structures, enforced by multiple base ligands along the DNA, can account for both magic number sizes and color variation around peak wavelength populations.
ABSTRACT
Experimental and density functional theory (DFT) studies are described that are focused on outlining the reactivity of the known photochemical nitric oxide precursor trans-Cr(cyclam)(ONO)(2)(+) ("CrONO", cyclam = 1,4,8,11-tetrazacycltetradecane). Studies in both aerated and deaerated aqueous media are described as are the roles of both the oxidant O(2) and a reductant such as glutathione in trapping the apparent Cr(IV) photoreaction intermediate trans-Cr(cyclam)(O)(ONO)(+). Also reported and characterized structurally is the Cr(V) product of long-term photolysis in the absence of reducing agents, the trans-dioxo species [trans-Cr(cyclam)(O)(2)](ClO(4)). Photosensitization experiments indicate that at least a significant fraction of the reaction occurs from the lowest energy doublet excited state(s). Lastly, cell culture experiments demonstrate that CrONO has little or no acute toxicity either before or after photolysis.
Subject(s)
Chromium/chemistry , Heterocyclic Compounds/metabolism , Monocytes/drug effects , Monocytes/radiation effects , Nitric Oxide , Photolysis , Photosensitizing Agents/metabolism , Prodrugs/metabolism , Cell Line, Tumor , Chromium/metabolism , Crystallography, X-Ray , Electron Spin Resonance Spectroscopy , Glutathione/chemistry , Glutathione/metabolism , Heterocyclic Compounds/chemical synthesis , Heterocyclic Compounds/pharmacology , Humans , Kinetics , L-Lactate Dehydrogenase/analysis , Light , Molecular Structure , Molecular Targeted Therapy/methods , Monocytes/pathology , Nitric Oxide/chemistry , Nitric Oxide/metabolism , Oxidation-Reduction/drug effects , Oxidation-Reduction/radiation effects , Photochemistry/methods , Photolysis/drug effects , Photolysis/radiation effects , Photosensitizing Agents/chemical synthesis , Photosensitizing Agents/pharmacology , Phototherapy/methods , Prodrugs/chemical synthesis , Prodrugs/pharmacology , Stereoisomerism , ThermodynamicsABSTRACT
Hydroxy fatty acids from Euglena gracilis were identified by reverse-phase high performance liquid chromatography coupled to a mass spectrometer run in atmospheric pressure chemical ionization positive ion mode. These metabolites were converted to methyl esters to improve stability and chromatographic properties. A detection limit of 20 pg/microl per injection was determined for 5-HETE methyl ester based on the signal to noise ratio of the m/z 317 ion which corresponds to the loss of a hydroxyl group (M-17) and the major fragment in all HETE methyl esters studied. This is the first report for these metabolites in E. gracilis.
Subject(s)
Chromatography, Liquid/methods , Euglena gracilis/chemistry , Fatty Acids/chemistry , Mass Spectrometry/methods , Animals , Atmospheric Pressure , Reproducibility of Results , Sensitivity and SpecificityABSTRACT
Several dienes of varying steric bulk containing an enol carbonate have been synthesized and reacted selectively with ozone at the isolated double bonds. Rate measurements have been made for ozonolysis in a series of substituted cyclohexenes to demonstrate the unusually slow reactivity of the enol carbonate. Proton and carbon NMR chemical shifts have been presented to show that the enol carbonate is not particularly electron deficient in its double bond. Calculation of partial charges from the Mulliken population analysis shows good correlation with the NMR data. The results suggest a carbonate association with ozone that slows the rate of carbon-carbon bond cleavage.