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1.
Genet Mol Res ; 10(4): 3783-93, 2011 Dec 08.
Article in English | MEDLINE | ID: mdl-22183948

ABSTRACT

The microbiota of the Amazon River basin has been little studied. We compared the structure of bacterial communities of the Solimões and Negro Rivers, the main Amazon River tributaries, based on analysis of 16S rRNA gene sequences. Water was sampled with a 3-L Van Dorn collection bottle; samples were collected at nine different points/depths totaling 27 L of water from each river. Total DNA was extracted from biomass retained by a 0.22-µm filter after sequential filtration of the water through 0.8- and 0.22-µm filters. The 16S rRNA gene was amplified by PCR, cloned and sequenced, and the sequences were analyzed with the PHYLIP and DOTUR programs to obtain the operational taxonomic units (OTUs) and to calculate the diversity and richness indices using the SPADE program. Taxonomic affiliation was determined using the naive Bayesian rRNA Classifier of the RDP II (Ribosomal Database Project). We recovered 158 sequences from the Solimões River grouped into 103 OTUs, and 197 sequences from the Negro River library grouped into 90 OTUs by the DOTUR program. The Solimões River was found to have a greater diversity of bacterial genera, and greater estimated richness of 446 OTUs, compared with 242 OTUs from the Negro River, as calculated by ACE estimator. The Negro River has less bacterial diversity, but more 16S rRNA gene sequences belonging to the bacterial genus Polynucleobacter were detected; 56 sequences from this genus were found (about 30% of the total sequences). We suggest that a more in-depth investigation be made to elucidate the role played by these bacteria in the river environment. These differences in bacterial diversity between Solimões and Negro Rivers could be explained by differences in organic matter content and pH of the rivers.


Subject(s)
Bacteria/genetics , Genes, Bacterial/genetics , Genes, rRNA/genetics , RNA, Ribosomal/genetics , Ribosome Subunits, Small, Bacterial/genetics , Rivers/microbiology , Bacteria/classification , Base Sequence , Brazil , Gene Library
2.
J Matern Fetal Neonatal Med ; 22 Suppl 3: 85-7, 2009.
Article in English | MEDLINE | ID: mdl-19718580

ABSTRACT

The aim of this study was to access evolution in care of very low birth weight (VLBW) infants after the implementation of a regionalization policy in Portugal. The data of the National Portuguese Network of VLBW infants are analyzed concerning mortality, morbidity, and quality of regionalization. A total of 12,826 VLBW infants born from 1 January 1994 to 31 December 2008 were enrolled, with a prevalence of 0.66%-0.99% of all live born. The global mortality was 11%. The major improvement in survival is in the babies more than 1000 g. Since 2004, the threshold of viability is 25 weeks, but the intact survival is around 28 weeks. In the last 10 years with more efficient regionalization more VLBW babies are born in the right place. The improvement in neonatal mortality rate was determinant in the good evolution of perinatal and infant mortalities. After reinforcement of regionalization policies, we found improvements in mortality for VLBW infants. The aims of regionalization were achieved. The reform of perinatal care in Portugal is an example of how a good diagnosis and adequate proposals combined with a strong political will is crucial for changing.


Subject(s)
Infant Mortality/trends , Infant, Very Low Birth Weight , Perinatal Care/trends , Humans , Infant , Infant, Newborn , Perinatal Care/standards , Portugal/epidemiology , Referral and Consultation , Regional Medical Programs
3.
Braz J Biol ; 64(1): 41-52, 2004 Feb.
Article in English | MEDLINE | ID: mdl-15195363

ABSTRACT

Macroecological variables of Anuran species found in a local assemblage from Central Brazil (Silvânia, Goiás State) were linked to population dyamics statistics of these species. Geographical range size (GRS), body size, and species' midpoints were the macroecological variables investigated for those species found in the local assemblage and for all other species (105 in the total) found in the Cerrado biome. For each species found in the local assemblage, data on abundance was obtained. Using this data, local population variability as expressed by the coefficient of variation was estimated. Distribution of means, medians, maximum, variances, and skewness (g1), for both GRS and body size, estimated in the local assemblage were compared, using null models, with the data extracted from the overall Cerrado species pool. The results indicated a clear macroecological relationship between GRS and body size and a decrease in local abundance when distance between the locality analyzed and species midpoint increased. According to null models, both body size and GRS values measured in the local assemblage can be considered a random sample from the regional species pool (Cerrado region). Finally, a three-dimensional analysis using body size, GRS, and local population estimates (abundance and variability), indicated that less abundant and more fluctuating species fell near the lower boundary of the polygonal relationship between GRS and body size. Thus, macroecological results linked with local data on population dynamics supported the minimum viable population model.


Subject(s)
Anura/anatomy & histology , Body Constitution , Ecosystem , Animals , Anura/classification , Anura/physiology , Brazil , Population Density , Population Dynamics , Spatial Behavior
4.
Braz. j. biol ; 64(1): 41-52, Feb. 2004. tab, graf
Article in English | LILACS | ID: lil-365267

ABSTRACT

Variáveis macroecológicas de uma assembléia local de espécies de anfíbios anuros do Brasil Central (Silvânia, Estado de Goiás) foram relacionadas com estatísticas de dinâmica de população dessas espécies. A extensão de ocorrência (GRS), o tamanho de corpo e o centro de distribuição das espécies foram as variáveis macroecológicas investigadas para as espécies da assembléia local e para todas as outras espécies (105 no total) encontradas no bioma de Cerrado. Também foram obtidos dados de abundância para 15 espécies da assembléia local. Usando esses dados, a variabilidade populacional foi estimada pelo coeficiente de variação. A distribuição de médias, medianas, máximos, assimetrias e curtoses, para GRS e tamanho de corpo, da assembléia local foi comparada, por intermédio de modelos nulos, com os dados do conjunto de espécies do Cerrado. Os resultados indicaram clara relação macroecológica entre a GRS e o tamanho do corpo, bem como diminuição da abundância local com o aumento da distância entre os centros de distribuição das espécies e a localidade analisada. De acordo com os modelos nulos, os valores do tamanho de corpo e da GRS das espécies da assembléia local podem ser considerados uma amostra aleatória proveniente da composição regional de todo o Cerrado. Finalmente, uma análise tridimensional considerando o tamanho do corpo, a GRS, a abundância local e a variabilidade populacional indicou que espécies menos abundantes, com maior variabilidade populacional, estão próximas ao limite inferior da relação poligonal entre GRS e tamanho de corpo. Assim, os resultados macroecológicos, quando relacionados a dados obtidos em pequenas escalas espaciais, corroboraram o modelo de população mínima viável.


Subject(s)
Animals , Anura , Body Constitution , Ecosystem , Anura , Brazil , Population Density , Population Dynamics , Spatial Behavior
5.
FEMS Microbiol Lett ; 196(2): 239-44, 2001 Mar 15.
Article in English | MEDLINE | ID: mdl-11267786

ABSTRACT

Genomic diversity among 34 strains of Escherichia coli belonging to different serotypes of the O26 serogroup -- encompassing strains from different geographical origins and Shiga toxin-negative Brazilian strains -- was evaluated through random amplified polymorphic DNA (RAPD) analysis. Our results indicate that Brazilian and non-Brazilian O26 strains fall under distinct but closely related differentiation clusters. RFLP-PCR analysis of the fliC gene sequence was done in order to identify the H(-) serotypes and served to confirm the clustering pattern obtained in the dendrogram generated from RAPD data. The epidemiological significance of these data is discussed.


Subject(s)
Adhesins, Bacterial , Carrier Proteins , Escherichia coli Proteins , Escherichia coli/classification , Escherichia coli/genetics , Bacterial Outer Membrane Proteins/genetics , Bacterial Typing Techniques , Brazil , Escherichia coli/isolation & purification , Escherichia coli/pathogenicity , Escherichia coli Infections/microbiology , Flagellin/genetics , Genetic Variation , Humans , Phylogeny , Polymerase Chain Reaction/methods , Polymorphism, Restriction Fragment Length , Random Amplified Polymorphic DNA Technique/methods , Serotyping , Shiga Toxin 1/genetics , Shiga Toxin 2/genetics , Shiga Toxins
7.
Rev. bras. cir ; 71(3): 161-4, 1981.
Article in Portuguese | LILACS | ID: lil-3954

ABSTRACT

Quatorze pacientes portadores de carcinoma da comissura labial, estadios T3NoMo (10) e T3N1Mo (4), foram submetidos a queiloplastia com retalho delto-peitoral apos a ressecao do tumor com margem de seguranca. A rotina da execucao terapeutica foi autonomizacao do retalho delto-peitoral, exerese da lesao, confeccao do tubo de pele, enxertia na area doadora, vectacao do tubo para a regiao e queiloplastia com o tubo delto-peitoral. Analisam-se neste trabalho, criticamente, os resultados obtidos. Ressaltou-se o aspecto funcional, o resultado cirurgico final menos mutilante e a maior morbidade da cirurgia, face ao elevado numero de operacoes e de complicacoes pos-operatorias. Com isto, o metodo parece ser uma alternativa secundaria nas queiloplastias a custa de retalho de pele


Subject(s)
Lip Neoplasms , Surgical Flaps
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