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1.
Chem Commun (Camb) ; 53(30): 4266-4269, 2017 Apr 11.
Article in English | MEDLINE | ID: mdl-28361136

ABSTRACT

A family of nanosized {Cu6Ln12} clusters with a 'windmill'-like topology was prepared from the employment of 2,6-diacetylpyridine dioxime, in conjunction with bridging N3-, in 3d/4f-metal chemistry; the octadecanuclear compounds exhibit single-molecule magnetism behavior and large magnetic entropy changes, depending on the 4f-metal ion present.

2.
J Biol Chem ; 291(43): 22741-22756, 2016 Oct 21.
Article in English | MEDLINE | ID: mdl-27576689

ABSTRACT

Multidrug resistance to current Food and Drug Administration-approved HIV-1 protease (PR) inhibitors drives the need to understand the fundamental mechanisms of how drug pressure-selected mutations, which are oftentimes natural polymorphisms, elicit their effect on enzyme function and resistance. Here, the impacts of the hinge-region natural polymorphism at residue 35, glutamate to aspartate (E35D), alone and in conjunction with residue 57, arginine to lysine (R57K), are characterized with the goal of understanding how altered salt bridge interactions between the hinge and flap regions are associated with changes in structure, motional dynamics, conformational sampling, kinetic parameters, and inhibitor affinity. The combined results reveal that the single E35D substitution leads to diminished salt bridge interactions between residues 35 and 57 and gives rise to the stabilization of open-like conformational states with overall increased backbone dynamics. In HIV-1 PR constructs where sites 35 and 57 are both mutated (e.g. E35D and R57K), x-ray structures reveal an altered network of interactions that replace the salt bridge thus stabilizing the structural integrity between the flap and hinge regions. Despite the altered conformational sampling and dynamics when the salt bridge is disrupted, enzyme kinetic parameters and inhibition constants are similar to those obtained for subtype B PR. Results demonstrate that these hinge-region natural polymorphisms, which may arise as drug pressure secondary mutations, alter protein dynamics and the conformational landscape, which are important thermodynamic parameters to consider for development of inhibitors that target for non-subtype B PR.


Subject(s)
Evolution, Molecular , HIV Protease , HIV-1 , Molecular Dynamics Simulation , Mutation, Missense , Polymorphism, Genetic , Amino Acid Substitution , Crystallography, X-Ray , HIV Protease/chemistry , HIV Protease/genetics , HIV-1/enzymology , HIV-1/genetics , Humans
3.
Inorg Chem ; 54(4): 1883-9, 2015 Feb 16.
Article in English | MEDLINE | ID: mdl-25621530

ABSTRACT

A new "offset" analogue of the classical [Mn6O2]-core oxime-bridged single-molecule magnets is introduced with a modified stacking arrangement of the [Mn3O] units. Studies of the magnetic properties reveal antiferromagnetic exchange interactions, a spin S = 4 ground state and population of low-lying excited states. Slow relaxation of the magnetization can be detected, with a corresponding energy barrier of 35.8 K. Interpretation of these features is supported with high-frequency EPR studies, quantifying the easy-axis type magnetic anisotropy, leading to a biaxial system. Redox properties investigated by cyclic and differential pulse voltammetry reveal multiple irreversible redox processes.

4.
Dalton Trans ; 43(30): 11456-60, 2014 Aug 14.
Article in English | MEDLINE | ID: mdl-24816838

ABSTRACT

The first use of the flexible Schiff base ligand N-salicylidene-2-aminocyclohexanol in metal cluster chemistry has afforded a new family of Ln7 clusters with ideal D(3h) point group symmetry and metal-centered trigonal prismatic topology; solid-state and solution studies revealed SMM and photoluminescence behaviors.

5.
Inorg Chem ; 48(20): 9831-45, 2009 Oct 19.
Article in English | MEDLINE | ID: mdl-19764790

ABSTRACT

The use has been explored in Mn cluster chemistry of N(3)(-) or Cl(-) in combination with N-methyldiethanolamine (mdaH(2)) or triethanolamine (teaH(3)). The reactions of Mn(ClO(4))(2).6H(2)O, NEt(3), NaN(3), and either mdaH(2) or teaH(3) (1:2:1:2) in DMF/MeOH afford {[Na(MeOH)(3)][Mn(7)(N(3))(6)(mda)(6)]}(n) (1) and {Na[Mn(7)(N(3))(6)(teaH)(6)]}(n) (2), respectively, whereas the 2:1:1 reaction of MnCl(2).4H(2)O, mdaH(2), and NEt(3) in MeCN gives (NHEt(3))[Mn(7)Cl(6)(mda)(6)] (3). Similar reactions using NBu(n)(4)N(3) in place of NaN(3) gave (NHEt(3))[Mn(7)(N(3))(6)(mda)(6)] (4) and (NHEt(3))[Mn(7)(N(3))(6)(teaH)(6)] (5). The Mn(7) anions consist of a Mn(6) hexagon of alternating Mn(II) and Mn(III) ions surrounding a central Mn(II) ion. The remaining ligation is by six bridging and chelating mda(2-) or teaH(2-) groups, and either six terminal N(3)(-) (1, 2, 4, 5) or Cl(-) (3) ions. Each bridging mda(2-) or teaH(2-) ligand contains both mu- and mu(3)-O atoms, resulting in a similar, near-planar [Mn(7)(mu(3)-OR)(6)(mu-OR)(6)](5+) core for all three complexes. The Mn(7) anions of 1 and 2 are connected via Na(+) cations to yield one-dimensional zigzag chains and three-dimensional windmill-like "hexagons-of-hexagons", respectively. In contrast, the Mn(7) anion of 3 forms a strong hydrogen-bond between the NHEt(3)(+) cation and a terminal Cl(-) ion giving a discrete ion-pair. Variable-temperature, solid-state direct current (dc) and alternating current (ac) magnetization studies were carried out in the 5.0-300 K range. Fits of dc magnetization versus field (H) and temperature (T) data by matrix diagonalization gave S = 11, g = 1.95, D = -0.15 cm(-1) for 1, S = 16, g = 1.95, D = -0.02 cm(-1) for 2, and S = 11, g = 1.92, D = -0.13 cm(-1) for 3 (D is the axial zero-field splitting parameter). Complexes 4 and 5 were also found to possess S = 11 and S = 16 ground states, respectively. The different ground states of 1 and 2 were rationalized on the basis of the sign and magnitude of the various Mn(2) exchange parameters obtained from density functional theory (DFT) calculations. This analysis confirmed the presence of spin frustration effects, with the ground states being determined by the relative magnitude of the two weakest interactions. The combined results demonstrate the usefulness of N-based dipodal and tripodal alkoxide-based chelates as a route to structurally and magnetically interesting Mn clusters.

6.
Inorg Chem ; 47(19): 9021-34, 2008 Oct 06.
Article in English | MEDLINE | ID: mdl-18698763

ABSTRACT

Convenient, high-yield routes have been developed to [Fe 10(OMe) 20(O 2CR) 10] ( 1) "ferric wheels" involving the alcoholysis of [Fe 3O(O 2CR) 6(H 2O) 3] (+) salts in MeOH in the presence of NEt 3. Reactivity studies have established [Fe 10(OMe) 20(O 2CMe) 10] ( 1a) to undergo clean carboxylate substitution with a variety of other RCO 2H groups to the corresponding [Fe 10(OMe) 20(O 2CR) 10] product. In contrast, the reaction with phenol causes a nuclearity change to give a smaller [Fe 8(OH) 4(OPh) 8(O 2CR) 12] ( 2) wheel. Similarly, reactions of [Fe 10(OMe) 20(O 2CR) 10] with the bidentate chelate ethylenediamine (en) cause a structural change to give either [Fe 8O 5(O 2CMe) 8(en) 8](ClO 4) 6 ( 3) or [Fe 2O(O 2CBu (t))(en) 4](NO 3) 3 ( 4), depending on conditions. Complex 3 possesses a "Christmas-star" Fe 8 topology comprising a central planar [Fe 4(mu 4-O)] (10+) square subunit edge-fused to four oxide-centered [Fe 3(mu 3-O)] (7+) triangular units. Variable-temperature, solid-state dc and ac magnetization studies on complexes 1a- 4 in the 5.0-300 K range established that all the complexes possess an S = 0 ground state. The magnetic susceptibility data for 4 were fit to the theoretical chi M versus T expression derived by the use of an isotropic Heisenberg spin Hamiltonian and the Van Vleck equation, and this revealed an antiferromagnetic exchange parameter with a value of J = -107.7(5) cm (-1). This value is consistent with that predicted by a previously published magnetostructural relationship. Theoretically computed values of the exchange constants in 3 were obtained with the ZILSH method, and the pattern of spin frustration within its core and the origin of its S = 0 ground state have been analyzed in detail.

7.
Inorg Chem ; 47(15): 6593-5, 2008 Aug 04.
Article in English | MEDLINE | ID: mdl-18588288

ABSTRACT

The S = 11 ground states of the Mn 7 family of mixed-valence complexes with a metal-centered hexagonal topology have been found by density functional theory calculations to arise by spin frustration involving small differences in the magnitudes of the two weakest interactions controlling the alignment of the central spin. Targeted structural perturbation has allowed a complex with the central spin flipped to be discovered, which thus possesses the maximum S = 16 ground state.

8.
Inorg Chem ; 47(11): 5006-21, 2008 Jun 02.
Article in English | MEDLINE | ID: mdl-18454518

ABSTRACT

The use has been explored of both azide (N3-) and alkoxide-containing groups such as the anions of 2-(hydroxymethyl)pyridine (hmpH), 2,6-pyridinedimethanol (pdmH2), 1,1,1-tris(hydroxymethyl)ethane (thmeH3) and triethanolamine (teaH3) in Mn cluster chemistry. The 1:1:1:1 reactions of hmpH, NaN3 and NEt3 with Mn(ClO4)(2).6H 2O or Mn(NO3)2.H2O in MeCN/MeOH afford [MnII4MnIII6O4(N3)4(hmp)12](X)2 [X=ClO4- (1), N3- (2)]. The [Mn10(mu4-O) 4(mu3-N3)4]14+ core of the cation has a tetra-face-capped octahedral topology, with a central MnIII6 octahedron, whose eight faces are bridged by four mu 3-N3- and four mu 4-O2- ions, the latter also bridging to four extrinsic MnII atoms. The core has Td symmetry, but the complete [MnII4MnIII6O4(N3)4(hmp)12]2+ cation has rare T symmetry, which is crystallographically imposed. A similar reaction of Mn(ClO4) (2).6H2O with one equiv each of NaN3, thmeH3, pdmH2, and NEt3 in MeCN/MeOH led to [MnII4MnIII6O2(N3)6(pdmH)4(thme)4] (3). Complex 3 is at the same oxidation level as 1/2 but its core is structurally different, consisting of two edge-fused [MnII2MnIII4(mu4-O)]14+ octahedra. Replacement of thmeH3 with teaH3 in this reaction gave instead [MnII2MnIII2(N3)4(pdmH)2(teaH)2] (4), containing a planar Mn 4 rhombus. Variable-temperature, solid-state dc and ac magnetization studies were carried out on 1-4 in the 5.0-300 K range. Complexes 1 and 2 are completely ferromagnetically coupled with a resulting S=22 ground state, one of the highest yet reported. Fits of dc magnetization vs field (H) and temperature (T) data by matrix diagonalization gave S=22, g=2.00, and D approximately 0.0 cm(-1) (D is the axial zero-field splitting parameter). In contrast, the data for 3 revealed dominant antiferromagnetic interactions and a resulting S=0 ground state. Complex 4 contains weakly ferromagnetically coupled Mn atoms, leading to an S=9 ground-state and low-lying excited states, and exhibits out-of-phase ac susceptibility signals characteristic of a single-molecule magnet. Theoretical values of the exchange constants in 1 obtained with density functional theory and ZILSH calculations were in good agreement with experimental values. The combined work demonstrates the synthetic usefulness of alcohol-based chelates and azido ligands when used together, and the synthesis in the present work of two "isomeric" MnIII6MnII4 cores that differ in spin by a remarkable 22 units.

9.
Inorg Chem ; 47(10): 4095-108, 2008 May 19.
Article in English | MEDLINE | ID: mdl-18433115

ABSTRACT

The syntheses, crystal structures, magnetochemical characterization, and theoretical calculations are reported for three new iron clusters [Fe 6O 2(NO3) 4(hmp) 8(H 2O) 2](NO3)2 (1), [Fe4(N3)6(hmp)6] (2), and [Fe8O3(OMe)(pdm)4(pdmH) 4(MeOH)2](ClO4)5 (3) (hmpH=2-(hydroxymethyl)pyridine; pdmH2=2,6-pyridinedimethanol). The reaction of hmpH with iron(III) sources such as Fe(NO3) 3.9H2O in the presence of NEt 3 gave 1, whereas 2 was obtained from a similar reaction by adding an excess of NaN3. Complex 3 was obtained in good yield from the reaction of pdmH 2 with Fe(ClO4)3.6H2O in MeOH in the presence of an organic base. The complexes all possess extremely rare or novel core topologies. The core of 1 comprises two oxide-centered [Fe3(mu3-O)](7+) triangular units linked together at two of their apexes by two sets of alkoxide arms of hmp(-) ligands. Complex 2 contains a zigzag array of four Fe (III) atoms within an [Fe4(mu-OR) 6](6+) core, with the azide groups all bound terminally. Finally, complex 3 contains a central [Fe 4(mu4-O)](10+) tetrahedron linked to two oxide-centered [Fe3(mu3-O)](7+) triangular units. Variable-temperature, solid-state dc and ac magnetization studies were carried out on complexes 1-3 in the 5.0-300 K range. Fitting of the obtained magnetization versus field (H) and temperature (T) data by matrix diagonalization and including only axial anisotropy (zero-field splitting, ZFS) established that 1 possesses an S=3 ground-state spin, with g=2.08, and D=-0.44 cm(-1). The magnetic susceptibility data for 2 up to 300 K were fit by matrix diagonalization and gave J1=-9.2 cm(-1), J2=-12.5 cm(-1), and g=2.079, where J 1 and J 2 are the outer and middle nearest-neighbor exchange interactions, respectively. Thus, the interactions between the Fe(III) centers are all antiferromagnetic, giving an S=0 ground state for 2. Similarly, complex 3 was found to have an S=0 ground state. Theoretically computed values of the exchange constants in 2 were obtained with DFT calculations and the ZILSH method and were in good agreement with the values obtained from the experimental data. Exchange constants obtained with ZILSH for 3 successfully rationalized the experimental S = 0 ground state. The combined work demonstrates the ligating flexibility of pyridyl-alcohol chelates and their usefulness in the synthesis of new polynuclear Fex clusters without requiring the copresence of carboxylate ligands.

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