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1.
Front Immunol ; 13: 850226, 2022.
Article in English | MEDLINE | ID: mdl-35464424

ABSTRACT

Glioblastoma is the most common and aggressive form of primary brain cancer, with no improvements in the 5-year survival rate of 4.6% over the past three decades. T-cell-based immunotherapies such as immune-checkpoint inhibitors and chimeric antigen receptor T-cell therapy have prolonged the survival of patients with other cancers and have undergone early-phase clinical evaluation in glioblastoma patients. However, a major challenge for T-cell-based immunotherapy of glioblastoma and other solid cancers is T-cell infiltration into tumours. This process is mediated by chemokine-chemokine receptor and integrin-adhesion molecule interactions, yet the specific nature of the molecules that may facilitate T-cell homing into glioblastoma are unknown. Here, we have characterised chemokine receptor and integrin expression profiles of endogenous glioblastoma-infiltrating T cells, and the chemokine expression profile of glioblastoma-associated cells, by single-cell RNA-sequencing. Subsequently, chemokine receptors and integrins were validated at the protein level to reveal enrichment of receptors CCR2, CCR5, CXCR3, CXCR4, CXCR6, CD49a, and CD49d in glioblastoma-infiltrating T-cell populations relative to T cells in matched patient peripheral blood. Complementary chemokine ligand expression was then validated in glioblastoma biopsies and glioblastoma-derived primary cell cultures. Together, enriched expression of homing receptor-ligand pairs identified in this study implicate a potential role in mediating T-cell infiltration into glioblastoma. Importantly, our data characterising the migratory receptors on endogenous tumour-infiltrating T cells could be exploited to enhance the tumour-homing properties of future T-cell immunotherapies for glioblastoma.


Subject(s)
Glioblastoma , Chemokines/metabolism , Glioblastoma/metabolism , Glioblastoma/therapy , Humans , Integrins/metabolism , Ligands , T-Lymphocyte Subsets
2.
Clin Orthop Relat Res ; 480(9): 1766-1775, 2022 09 01.
Article in English | MEDLINE | ID: mdl-35412473

ABSTRACT

BACKGROUND: Incidental durotomy is an intraoperative complication in spine surgery that can lead to postoperative complications, increased length of stay, and higher healthcare costs. Natural language processing (NLP) is an artificial intelligence method that assists in understanding free-text notes that may be useful in the automated surveillance of adverse events in orthopaedic surgery. A previously developed NLP algorithm is highly accurate in the detection of incidental durotomy on internal validation and external validation in an independent cohort from the same country. External validation in a cohort with linguistic differences is required to assess the transportability of the developed algorithm, referred to geographical validation. Ideally, the performance of a prediction model, the NLP algorithm, is constant across geographic regions to ensure reproducibility and model validity. QUESTION/PURPOSE: Can we geographically validate an NLP algorithm for the automated detection of incidental durotomy across three independent cohorts from two continents? METHODS: Patients 18 years or older undergoing a primary procedure of (thoraco)lumbar spine surgery were included. In Massachusetts, between January 2000 and June 2018, 1000 patients were included from two academic and three community medical centers. In Maryland, between July 2016 and November 2018, 1279 patients were included from one academic center, and in Australia, between January 2010 and December 2019, 944 patients were included from one academic center. The authors retrospectively studied the free-text operative notes of included patients for the primary outcome that was defined as intraoperative durotomy. Incidental durotomy occurred in 9% (93 of 1000), 8% (108 of 1279), and 6% (58 of 944) of the patients, respectively, in the Massachusetts, Maryland, and Australia cohorts. No missing reports were observed. Three datasets (Massachusetts, Australian, and combined Massachusetts and Australian) were divided into training and holdout test sets in an 80:20 ratio. An extreme gradient boosting (an efficient and flexible tree-based algorithm) NLP algorithm was individually trained on each training set, and the performance of the three NLP algorithms (respectively American, Australian, and combined) was assessed by discrimination via area under the receiver operating characteristic curves (AUC-ROC; this measures the model's ability to distinguish patients who obtained the outcomes from those who did not), calibration metrics (which plot the predicted and the observed probabilities) and Brier score (a composite of discrimination and calibration). In addition, the sensitivity (true positives, recall), specificity (true negatives), positive predictive value (also known as precision), negative predictive value, F1-score (composite of precision and recall), positive likelihood ratio, and negative likelihood ratio were calculated. RESULTS: The combined NLP algorithm (the combined Massachusetts and Australian data) achieved excellent performance on independent testing data from Australia (AUC-ROC 0.97 [95% confidence interval 0.87 to 0.99]), Massachusetts (AUC-ROC 0.99 [95% CI 0.80 to 0.99]) and Maryland (AUC-ROC 0.95 [95% CI 0.93 to 0.97]). The NLP developed based on the Massachusetts cohort had excellent performance in the Maryland cohort (AUC-ROC 0.97 [95% CI 0.95 to 0.99]) but worse performance in the Australian cohort (AUC-ROC 0.74 [95% CI 0.70 to 0.77]). CONCLUSION: We demonstrated the clinical utility and reproducibility of an NLP algorithm with combined datasets retaining excellent performance in individual countries relative to algorithms developed in the same country alone for detection of incidental durotomy. Further multi-institutional, international collaborations can facilitate the creation of universal NLP algorithms that improve the quality and safety of orthopaedic surgery globally. The combined NLP algorithm has been incorporated into a freely accessible web application that can be found at https://sorg-apps.shinyapps.io/nlp_incidental_durotomy/ . Clinicians and researchers can use the tool to help incorporate the model in evaluating spine registries or quality and safety departments to automate detection of incidental durotomy and optimize prevention efforts. LEVEL OF EVIDENCE: Level III, diagnostic study.


Subject(s)
Artificial Intelligence , Natural Language Processing , Algorithms , Australia , Humans , Reproducibility of Results , Retrospective Studies
3.
Cancers (Basel) ; 12(1)2020 Jan 01.
Article in English | MEDLINE | ID: mdl-31906280

ABSTRACT

Glioblastoma (GBM) is the most commonly diagnosed malignant brain tumor in adults. The prognosis for patients with GBM remains poor and largely unchanged over the last 30 years, due to the limitations of existing therapies. Thus, new therapeutic approaches are desperately required. Sphingolipids are highly enriched in the brain, forming the structural components of cell membranes, and are major lipid constituents of the myelin sheaths of nerve axons, as well as playing critical roles in cell signaling. Indeed, a number of sphingolipids elicit a variety of cellular responses involved in the development and progression of GBM. Here, we discuss the role of sphingolipids in the pathobiology of GBM, and how targeting sphingolipid metabolism has emerged as a promising approach for the treatment of GBM.

4.
World Neurosurg ; 113: 153-162, 2018 May.
Article in English | MEDLINE | ID: mdl-29425980

ABSTRACT

OBJECTIVE: The study uses meta-regression analysis to quantify the dose-dependent effects of statin pharmacotherapy on vasospasm, delayed ischemic neurologic deficits (DIND), and mortality in aneurysmal subarachnoid hemorrhage. METHODS: Prospective, retrospective observational studies, and randomized controlled trials (RCTs) were retrieved by a systematic database search. Summary estimates were expressed as absolute risk (AR) for a given statin dose or control (placebo). Meta-regression using inverse variance weighting and robust variance estimation was performed to assess the effect of statin dose on transformed AR in a random effects model. Dose-dependence of predicted AR with 95% confidence interval (CI) was recovered by using Miller's Freeman-Tukey inverse. RESULTS: The database search and study selection criteria yielded 18 studies (2594 patients) for analysis. These included 12 RCTs, 4 retrospective observational studies, and 2 prospective observational studies. Twelve studies investigated simvastatin, whereas the remaining studies investigated atorvastatin, pravastatin, or pitavastatin, with simvastatin-equivalent doses ranging from 20 to 80 mg. Meta-regression revealed dose-dependent reductions in Freeman-Tukey-transformed AR of vasospasm (slope coefficient -0.00404, 95% CI -0.00720 to -0.00087; P = 0.0321), DIND (slope coefficient -0.00316, 95% CI -0.00586 to -0.00047; P = 0.0392), and mortality (slope coefficient -0.00345, 95% CI -0.00623 to -0.00067; P = 0.0352). CONCLUSIONS: The present meta-regression provides weak evidence for dose-dependent reductions in vasospasm, DIND and mortality associated with acute statin use after aneurysmal subarachnoid hemorrhage. However, the analysis was limited by substantial heterogeneity among individual studies. Greater dosing strategies are a potential consideration for future RCTs.


Subject(s)
Brain Ischemia/complications , Hydroxymethylglutaryl-CoA Reductase Inhibitors/therapeutic use , Subarachnoid Hemorrhage/complications , Subarachnoid Hemorrhage/drug therapy , Vasospasm, Intracranial/drug therapy , Humans , Observational Studies as Topic , Prospective Studies , Randomized Controlled Trials as Topic , Regression Analysis , Retrospective Studies , Treatment Outcome , Vasospasm, Intracranial/etiology
5.
Otol Neurotol ; 30(5): 602-3, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19574942

ABSTRACT

OBJECTIVE: Otogenic intracranial abscess complicating pregnancy has not been reported in world literature. We report the first case of cerebellar abscess secondary to chronic suppurative otitis media (CSOM) in a 23-year-old lady at 35 weeks of gestation. She was successfully treated by Caesarean section and delivery of a healthy baby, followed by combined neurosurgical and otologic procedures in the same anesthetic sitting. STUDY DESIGN: Case report. SETTING: Tertiary care referral center in a developing country. CONCLUSION: Otogenic intracranial abscess complicating pregnancy is an extremely challenging therapeutic dilemma for the attending health care provider. Concurrent surgical management by multidisciplinary intervention is safe and to be considered the treatment of choice in a tertiary referral center.


Subject(s)
Brain Abscess/etiology , Brain Abscess/surgery , Otitis Media, Suppurative/complications , Pregnancy Complications, Infectious/etiology , Pregnancy Complications, Infectious/surgery , Cesarean Section , Female , Humans , Patient Care Team , Pregnancy , Pregnancy Outcome , Tomography, X-Ray Computed , Young Adult
6.
J Clin Neurosci ; 16(9): 1230-2, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19505828

ABSTRACT

We report a 30-year-old male who had undergone a renal transplant and suffered with secondary hyperparathyroidism. He presented with back pain and minimal neurological deterioration, caused by a thoracic brown tumour. The imaging findings, surgical treatment of the spinal lesion and outcome are discussed. We also discuss primary medical therapy and suggest a rational approach to further imaging of patients in whom brown tumour is suspected.


Subject(s)
Kidney Transplantation , Spinal Neoplasms/complications , Adult , Gait/physiology , Humans , Hyperparathyroidism, Secondary/complications , Kidney Failure, Chronic/complications , Kidney Failure, Chronic/surgery , Magnetic Resonance Imaging , Male , Spinal Cord Compression/etiology , Spinal Cord Compression/surgery , Spinal Neoplasms/pathology , Spinal Neoplasms/surgery
7.
J Clin Neurosci ; 16(8): 1095-6, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19428258

ABSTRACT

In 1998, one of us (MJM) published an article discussing several patients with Osler-Weber-Rendu Syndrome or hereditary haemorrhagic telangiectasia with secondary cerebral complications. These were intracerebral haemorrhage, ischaemic infarct and intracerebral abscess. We outlined the background of the syndrome as well as its genotype and predicted an increasingly important role for genetic testing. Our aim in this paper is to examine the progress of one of the patients as well as recommending follow-up guidelines for patients with pulmonary arteriovenous fistulae that have been treated.


Subject(s)
Arteriovenous Fistula/therapy , Brain Abscess/therapy , Gram-Positive Bacterial Infections/therapy , Lung Diseases/therapy , Peptostreptococcus , Telangiectasia, Hereditary Hemorrhagic/therapy , Arteriovenous Fistula/pathology , Brain/pathology , Brain Abscess/pathology , Follow-Up Studies , Gram-Positive Bacterial Infections/pathology , Humans , Lung Diseases/pathology , Magnetic Resonance Imaging , Male , Middle Aged , Telangiectasia, Hereditary Hemorrhagic/pathology
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