Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 9 de 9
Filter
Add more filters











Database
Language
Publication year range
1.
Microbiol Res ; 287: 127862, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39121704

ABSTRACT

Endophytes, microorganisms inhabiting internal plant tissues, play a pivotal role in plant growth and disease resistance. Moreover, previous studies have established that Musa plants derive disease protective functions from their microbiome. Notably, one of the crop wild relatives of banana, the Calcutta 4 variety, exhibits resistance to various phytopathogens such as Pseudocercospora fijiensis (P. fijiensis), while the Williams commercial cultivar (cv.) is highly susceptible. Therefore, this study aims primarily to characterize and compare the endophytic microbiota composition of Calcutta 4 and Williams banana plants when grown sympatrically. Alongside, differences in endophytic microbiome between plant sections (shoot or roots), growth phases (in vitro or greenhouse) and fitness factors such as the addition of plant growth-promoting bacteria Bacillus subtilis EA-CB0575 (T2 treatment) or infection by P. fijiensis (T3 treatment) were examined. Both culture-dependent and -independent techniques were used to evaluate these differences and assess the culturability of banana endophytes under varying conditions. Microbial cultures resulted in 331 isolates distributed across 54 genera when all treatments were evaluated, whereas 16 S sequencing produced 9510 ASVs assigned in 1456 genera. Alpha and beta diversity exhibited significant differences based on plant section, with an increase in phylogenetic diversity observed in plants with pathogen infection (T3) compared to control plants (T1). Additionally, four differentially abundant genera associated with nitrogen metabolism were identified in T3 plants and seven genera showed differential abundance when comparing varieties. When culture-dependent and -independent methods were compared, it was found that isolates represented 3.7 % of the genera detected by culture-independent methods, accounting for 12-41 % of the total data depending on the treatment. These results are crucial for proposing management strategies derived from crop wild relatives to enhance the resilience of susceptible commercial varieties against fitness factors affecting crop development. Additionally, they help to decipher the pathogenic effects of P. fijiensis in banana plants and advance the understanding of how plant domestication influences the endosphere.


Subject(s)
Bacteria , Biodiversity , Endophytes , Microbiota , Musa , Plant Roots , Musa/microbiology , Endophytes/classification , Endophytes/isolation & purification , Endophytes/genetics , Plant Roots/microbiology , Bacteria/classification , Bacteria/genetics , Bacteria/isolation & purification , Plant Diseases/microbiology , RNA, Ribosomal, 16S/genetics , Phylogeny , Crops, Agricultural/microbiology , Plant Shoots/microbiology , Plant Shoots/growth & development , Disease Resistance
2.
Environ Sci Technol ; 2024 Jul 03.
Article in English | MEDLINE | ID: mdl-38958382

ABSTRACT

With the annual global electricity production exceeding 30,000 TWh, the safe transmission of electric power has been heavily relying on SF6, the most potent industrial greenhouse gas. While promising SF6 alternatives have been proposed, their compatibilities with materials used in gas-insulated equipment (GIE) must be thoroughly studied. This is particularly true as the emerging SF6 alternatives generally leverage their relatively higher reactivity to achieve lower global warming potentials (GWPs). Here, a high-throughput compatibility screening of common GIE materials was conducted with a representative SF6 alternative, namely, C4F7N (2,3,3,3-tetrafluoro-2-(trifluoromethyl)propanenitrile)/CO2 gas mixtures. In this screening, the insulation performance of C4F7N/CO2 gas mixtures, as an indicator of the C4F7N/materials compatibility level, was periodically monitored during the thermal aging with tens of materials from SF6-insulated GIE, including desiccants/adsorbents, rubber, plastics, composites, ceramics, metals, etc. The identification of incompatible materials and the follow-up mechanism studies suggested that the acidity of materials represents the primary cause for C4F7N/materials incompatibility when C4F7N/CO2 gas mixtures are used as a drop-in replacement solution for existing SF6-insulated apparatuses. Mitigation strategies tackling the acidity of materials were then proposed and validated. Additionally, the amphoteric characteristics of C4F7N were briefly discussed. This work provides insight into the materials incompatibility of SF6 alternatives, along with validated mitigation strategies, for the selection and design of materials used in future eco-friendly GIE.

3.
ACS Nano ; 17(20): 20203-20217, 2023 Oct 24.
Article in English | MEDLINE | ID: mdl-37797304

ABSTRACT

Tantalum-based oxide electrodes have recently drawn much attention as promising anode materials owing to their hybrid Li+ storage mechanism. However, the utilization of LiTaO3 electrode materials that can deliver a high theoretical capacity of 568 mAh g-1 has been neglected. Herein, we prepare a layered LiTaO3 electrode formed artificially by restacking LiTaO3 nanosheets using a facile synthesis method and investigate the Li+ storage performance of this electrode compared with its bulk counterpart. The designed artificially layered anode reaches specific capacities of 474, 290, and 201 mAh g-1, respectively, at 56 (>500 cycles), 280 (>1000 cycles), and 1120 mAg-1 (>2000 cycles) current densities. We also determine that the Li+ storage capacity of the layered LiTaO3 demonstrates a cycling-induced capacity increase after a certain number of cycles. Adopting various characterization techniques on LiTaO3 electrodes before and after electrochemical cycling, we attribute the origin of the cycling-induced improvement of the Li+ storage capacity in these electrodes to the amorphization of the electrode after cycling, formation of metallic tantalum during the partially irreversible conversion mechanism, lower activation overpotential of electrodes due to the formation of Li-rich species by the lithium insertion mechanism, and finally the intrinsic piezoelectric behavior of LiTaO3 that can regulate Li+ diffusion kinetics.

4.
ACS Sens ; 8(2): 848-857, 2023 02 24.
Article in English | MEDLINE | ID: mdl-36689276

ABSTRACT

The COVID-19 pandemic has caused over 7 million deaths worldwide and over 1 million deaths in the US as of October 15, 2022. Virus testing lags behind the level or availability necessary for pandemic events like COVID-19, especially in resource-limited settings. Here, we report a low cost, mix-and-read COVID-19 assay using a synthetic SARS-CoV-2 sensor, imaged and processed using a smartphone. The assay was optimized for saliva and employs 3D-printed micropipette tips with a layer of monoclonal anti-SARS-CoV-2 inside the tip. A polymeric sensor for SARS-CoV-2 spike (S) protein (COVRs) synthesized as a thin film on silica nanoparticles provides 3,3',5-5'-tetramethylbenzidine responsive color detection using streptavidin-poly-horseradish peroxidase (ST-poly-HRP) with 400 HRP labels per molecule. COVRs were engineered with an NHS-PEG4-biotin coating to reduce nonspecific binding and provide affinity for ST-poly-HRP labels. COVRs binds to S-proteins with binding strengths and capacities much larger than salivary proteins in 10% artificial saliva-0.01%-Triton X-100 (as virus deactivator). A limit of detection (LOD) of 200 TCID50/mL (TCID50 = tissue culture infectious dose 50%) in artificial saliva was obtained using the Color Grab smartphone app and verified using ImageJ. Viral load values obtained in 10% pooled human saliva spiked with inactivated SARS-COV-2 virus gave excellent correlation with viral loads obtained from qPCR (p = 0.0003, r = 0.99).


Subject(s)
COVID-19 , Humans , SARS-CoV-2 , Smartphone , Saliva, Artificial , Pandemics , Horseradish Peroxidase , Printing, Three-Dimensional
5.
ACS Appl Mater Interfaces ; 14(45): 51041-51052, 2022 Nov 16.
Article in English | MEDLINE | ID: mdl-36335644

ABSTRACT

Herein, a straightforward synthesis method for highly mesoporous molybdenum oxide has been demonstrated via use of inverse micelles and molybdenum-oxo cluster formation. The synthesized catalyst is stable, crystalline, and MoO3 phase pure, as confirmed through thermogravimetric analysis, X-ray diffraction, and X-ray photoelectron spectroscopy. Further results from electron paramagnetic resonance, Raman spectroscopy, and UV-vis spectroscopy confirm the MoO3 phase purity. Chemisorption studies reveal that the synthesized material is 65 times more active than its commercial parts. The quantitative value of ammonia chemisorption for the synthesized catalyst is 1270 µmol/g, whereas the commercial catalyst only gives 22 µmol/g. These materials were tested for electrophilic substitution reactions since they are excellent solid acid. Electrophilic substitution of benzyl alcohol with toluene gives a >99% conversion with ∼80% of selectivity toward the methyl diphenylmethane product. The turnover number and turnover frequency values were calculated to be as high as 115 and 38, respectively. A substrate scope study shows that the reaction has preference toward electron-donating groups, whereas electron-withdrawing groups block the reaction. Based on the obtained results, a mechanism has been proposed.

6.
Funct Integr Genomics ; 20(4): 575-589, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32198678

ABSTRACT

Bacillus subtilis is a remarkably diverse bacterial species that displays many ecological functions. Given its genomic diversity, the strain Bacillus subtilis EA-CB0575, isolated from the rhizosphere of a banana plant, was sequenced and assembled to determine the genomic potential associated with its plant growth promotion potential. The genome was sequenced by Illumina technology and assembled using Velvet 1.2.10, resulting in a whole genome of 4.09 Mb with 4332 genes. Genes involved in the production of indoles, siderophores, lipopeptides, volatile compounds, phytase, bacilibactin, and nitrogenase were predicted by gene annotation or by metabolic pathway prediction by RAST. These potential traits were determined using in vitro biochemical tests, finding that B. subtilis EA-CB0575 produces two families of lipopeptides (surfactin and fengycin), solubilizes phosphate, fixes nitrogen, and produces indole and siderophores compounds. Finally, strain EA-CB0575 increased 34.60% the total dry weight (TDW) of tomato plants with respect to non-inoculated plants at greenhouse level. These results suggest that the identification of strain-specific genes and predicted metabolic pathways might explain the strain potential to promote plant growth by several mechanisms of action, accelerating the development of plant biostimulants for sustainable agricultural.


Subject(s)
Bacillus subtilis/genetics , Genome, Bacterial , Rhizosphere , 6-Phytase/genetics , 6-Phytase/metabolism , Bacillus subtilis/metabolism , Bacillus subtilis/pathogenicity , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Crop Production/methods , Indoles/metabolism , Lipopeptides/genetics , Lipopeptides/metabolism , Solanum lycopersicum/growth & development , Solanum lycopersicum/microbiology , Musa/growth & development , Musa/microbiology , Nitrogenase , Peptides, Cyclic/genetics , Peptides, Cyclic/metabolism , Siderophores/genetics , Siderophores/metabolism
7.
Microbiol Res ; 217: 69-80, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30384910

ABSTRACT

Bacillus subtilis EA-CB0575 is a plant growth-promoting bacterium (PGPB) associated with banana and tomato crops. Root colonization is an important trait for PGPB microorganisms and potentiates the bacterial effect related to the mechanisms of plant growth promotion. Therefore, detection of bacterial colonization of roots in different culture systems is important in the study of plant-microorganism interactions. In this study, fluorescent in situ hybridization (FISH) and catalyzed reporter deposition-FISH (CARD-FISH) were evaluated to determine the colonization ability of B. subtilis EA-CB0575 on banana and tomato roots planted on solid and liquid Murashige and Skoog medium (MS(S) and MS(L), respectively) and in soil for tomato plants. Results showed B. subtilis colonization 0-30 days post inoculation for banana and tomato plants in different culture systems with differential distribution of bacterial cells along tomato and banana roots. FISH and CARD-FISH methodologies were both successful in detecting B. subtilis colonies, but CARD-FISH proved to be superior due to its enhanced fluorescence signal. The presence of bacteria correlated with the promotion of plant growth in both plant species, providing clues to relate rhizospheric colonization with improvement in plant growth. FISH and CARD-FISH analysis results suggested the presence of native microbiota on the roots of in vitro banana plants, but not on those of tomato plants.


Subject(s)
Agricultural Inoculants , Bacillus subtilis/growth & development , Bacillus subtilis/physiology , Musa/microbiology , Plant Development , Plant Roots/microbiology , Solanum lycopersicum/microbiology , In Situ Hybridization, Fluorescence , Solanum lycopersicum/growth & development , Microbiota , Microscopy, Electron, Scanning , Musa/growth & development , Rhizosphere , Seeds/microbiology , Soil , Soil Microbiology
8.
J Vis Exp ; (138)2018 08 31.
Article in English | MEDLINE | ID: mdl-30222154

ABSTRACT

Protocols for preparing and testing catalytic aerogels by incorporating metal species into silica and alumina aerogel platforms are presented. Three preparation methods are described: (a) the incorporation of metal salts into silica or alumina wet gels using an impregnation method; (b) the incorporation of metal salts into alumina wet gels using a co-precursor method; and (c) the addition of metal nanoparticles directly into a silica aerogel precursor mixture. The methods utilize a hydraulic hot press, which allows for rapid (<6 h) supercritical extraction and results in aerogels of low density (0.10 g/mL) and high surface area (200-800 m2/g). While the work presented here focuses on the use of copper salts and copper nanoparticles, the approach can be implemented using other metal salts and nanoparticles. A protocol for testing the three-way catalytic ability of these aerogels for automotive pollution mitigation is also presented. This technique uses custom-built equipment, the Union Catalytic Testbed (UCAT), in which a simulated exhaust mixture is passed over an aerogel sample at a controlled temperature and flow rate. The system is capable of measuring the ability of the catalytic aerogels, under both oxidizing and reducing conditions, to convert CO, NO and unburned hydrocarbons (HCs) to less harmful species (CO2, H2O and N2). Example catalytic results are presented for the aerogels described.


Subject(s)
Cell Extracts/chemistry , Gels/chemistry , Catalysis
9.
J Microbiol Methods ; 128: 125-129, 2016 09.
Article in English | MEDLINE | ID: mdl-27263830

ABSTRACT

Strains of Bacillus subtilis are plant growth-promoting bacteria (PGPB) of many crops and are used as inoculants. PGPB colonization is an important trait for success of a PGPB on plants. A specific probe, based on the 16 s rRNA of Bacillus subtilis, was designed and evaluated to distinguishing, by fluorescence in situ hybridization (FISH), between this species and the closely related Bacillus amyloliquefaciens. The selected target for the probe was between nucleotides 465 and 483 of the gene, where three different nucleotides can be identified. The designed probe successfully hybridized with several strains of Bacillus subtilis, but failed to hybridize not only with B. amyloliquefaciens, but also with other strains such as Bacillus altitudinis, Bacillus cereus, Bacillus gibsonii, Bacillus megaterium, Bacillus pumilus; and with the external phylogenetic strains Azospirillum brasilense Cd, Micrococcus sp. and Paenibacillus sp. The results showed the specificity of this molecular probe for B. subtilis.


Subject(s)
Bacillus subtilis/classification , Bacillus subtilis/genetics , Bacillus/genetics , RNA, Ribosomal, 16S/genetics , Soil Microbiology , Bacillus/classification , Bacillus subtilis/isolation & purification , Base Sequence , In Situ Hybridization, Fluorescence , Rhizosphere
SELECTION OF CITATIONS
SEARCH DETAIL