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1.
Nat Commun ; 13(1): 4692, 2022 08 10.
Article in English | MEDLINE | ID: mdl-35948542

ABSTRACT

Huntington's disease is a neurodegenerative disease caused by an expanded polyQ stretch within Huntingtin (HTT) that renders the protein aggregation-prone, ultimately resulting in the formation of amyloid fibrils. A trimeric chaperone complex composed of Hsc70, DNAJB1 and Apg2 can suppress and reverse the aggregation of HTTExon1Q48. DNAJB1 is the rate-limiting chaperone and we have here identified and characterized the binding interface between DNAJB1 and HTTExon1Q48. DNAJB1 exhibits a HTT binding motif (HBM) in the hinge region between C-terminal domains (CTD) I and II and binds to the polyQ-adjacent proline rich domain (PRD) of soluble as well as aggregated HTT. The PRD of HTT represents an additional binding site for chaperones. Mutation of the highly conserved H244 of the HBM of DNAJB1 completely abrogates the suppression and disaggregation of HTT fibrils by the trimeric chaperone complex. Notably, this mutation does not affect the binding and remodeling of any other protein substrate, suggesting that the HBM of DNAJB1 is a specific interaction site for HTT. Overexpression of wt DNAJB1, but not of DNAJB1H244A can prevent the accumulation of HTTExon1Q97 aggregates in HEK293 cells, thus validating the biological significance of the HBM within DNAJB1.


Subject(s)
Huntington Disease , Neurodegenerative Diseases , Amyloid/chemistry , HEK293 Cells , HSP40 Heat-Shock Proteins/genetics , Humans , Huntingtin Protein/metabolism , Huntington Disease/genetics , Molecular Chaperones/genetics , Molecular Chaperones/metabolism , Protein Aggregates
2.
J Mol Biol ; 432(7): 2405-2427, 2020 03 27.
Article in English | MEDLINE | ID: mdl-32142789

ABSTRACT

Tight junctions regulate paracellular permeability size and charge selectively. Models have been proposed for the molecular architecture of tight junction strands and paracellular channels. However, they are not fully consistent with experimental and structural data. Here, we analysed the architecture of claudin-based tight junction strands and channels by cellular reconstitution of strands, structure-guided mutagenesis, in silico protein docking and oligomer modelling. Prototypic channel- (Cldn10b) and barrier-forming (Cldn3) claudins were analysed. Förster resonance energy transfer (FRET) assays indicated multistep claudin polymerisation, starting with cis-oligomerization specific to the claudin subtype, followed by trans-interaction-triggered cis-polymerisation. Alternative protomer interfaces were modelled in silico and tested by cysteine-mediated crosslinking, confocal- and freeze fracture EM-based analysis of strand formation. The analysed claudin mutants included also mutations causing the HELIX syndrome. The results indicated that protomers in Cldn10b and Cldn3 strands form similar antiparallel double rows, as has been suggested for Cldn15. Mutually stabilising -hydrophilic and hydrophobic - cis- and trans-interfaces were identified that contained novel key residues of extracellular segments ECS1 and ECS2. Hydrophobic clustering of the flexible ECS1 ß1ß2 loops together with ECS2-ECS2 trans-interaction is suggested to be the driving force for conjunction of tetrameric building blocks into claudin polymers. Cldn10b and Cldn3 are indicated to share this polymerisation mechanism. However, in the paracellular centre of tetramers, electrostatic repulsion may lead to formation of pores (Cldn10b) and electrostatic attraction to barriers (Cldn3). Combining in vitro data and in silico modelling, this study improves mechanistic understanding of paracellular permeability regulation by elucidating claudin assembly and its pathologic alteration as in HELIX syndrome.


Subject(s)
Claudin-3/chemistry , Claudins/chemistry , Protein Multimerization , Tight Junctions/chemistry , Animals , Cell Membrane Permeability , Claudin-3/genetics , Claudin-3/metabolism , Claudins/genetics , Claudins/metabolism , HEK293 Cells , Humans , Ion Channels , Mice , Mutation , Protein Conformation , Syndrome , Tight Junctions/metabolism
3.
Sci Adv ; 6(8): eaax5783, 2020 02.
Article in English | MEDLINE | ID: mdl-32128395

ABSTRACT

Synaptic transmission is the predominant form of communication in the brain. It requires functionally specialized molecular machineries constituted by thousands of interacting synaptic proteins. Here, we made use of recent advances in cross-linking mass spectrometry (XL-MS) in combination with biochemical and computational approaches to reveal the architecture and assembly of synaptic protein complexes from mouse brain hippocampus and cerebellum. We obtained 11,999 unique lysine-lysine cross-links, comprising connections within and between 2362 proteins. This extensive collection was the basis to identify novel protein partners, to model protein conformational dynamics, and to delineate within and between protein interactions of main synaptic constituents, such as Camk2, the AMPA-type glutamate receptor, and associated proteins. Using XL-MS, we generated a protein interaction resource that we made easily accessible via a web-based platform (http://xlink.cncr.nl) to provide new entries into exploration of all protein interactions identified.


Subject(s)
Proteomics , Synapses/metabolism , Calcium-Calmodulin-Dependent Protein Kinase Type 2/chemistry , Calcium-Calmodulin-Dependent Protein Kinase Type 2/metabolism , Models, Molecular , Protein Binding , Protein Conformation , Protein Interaction Domains and Motifs , Protein Interaction Mapping , Protein Interaction Maps , Proteins/chemistry , Proteins/metabolism , Proteomics/methods , Reproducibility of Results , Structure-Activity Relationship , Tandem Mass Spectrometry , Workflow
4.
Semin Cell Dev Biol ; 42: 3-12, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25957516

ABSTRACT

The tetra-span transmembrane proteins of the claudin family are critical components of formation and function of tight junctions (TJ). Homo- and heterophilic side-by-side (cis) and intercellular head-to-head (trans) interactions of 27 claudin-subtypes regulate tissue-specifically the paracellular permeability and/or tightness between epithelial or endothelial cells. This review highlights the functional impact that has been identified for particular claudin residues by relating them to structural features and architectural characteristics in the light of structural advances, which have been contributed by homology models, cryo-electron microscopy and crystal structures. The differing contributions to the TJ functionalities by claudins are dissected for the transmembrane region, the first and the second extracellular loop of claudins separately. Their particular impact to oligomerisation and TJ strand- and pore-formation is surveyed. Detailed knowledge about structure-function relationships about claudins helps to reveal the molecular mechanisms of TJ assembly and regulation of paracellular permeability, which is yet not fully understood.


Subject(s)
Claudins/chemistry , Claudins/physiology , Animals , Crystallography, X-Ray , Enterotoxins/chemistry , Humans , Models, Molecular , Protein Structure, Tertiary , Structure-Activity Relationship , Tight Junctions
5.
Article in German | MEDLINE | ID: mdl-9574198

ABSTRACT

Diabetics suffer from a high rate of amputation. Unclear terminology is partially responsible. We offer a clear classification (type A = PAOD; type B = polyneuropathy; type C = combination of A + B). Our classification for plantar ulcer is simple and yields clear indications for appropriate therapy. The operative principles for type B, foot will be discussed (dorsal incision, distal two-thirds resection of metatarsals, proper coverage of bones with soft tissues, necrectomy, placement of Gentamycin-bonded collagen sponge, drainage, primary wound closure, plantar ulcer left untouched). In a collection of 284 treated type B diabetic feet, in only 6% of cases was there secondary wound healing. The plantar ulcer was always cured.


Subject(s)
Diabetic Foot/surgery , Antibiotic Prophylaxis , Debridement , Diabetic Foot/classification , Diabetic Foot/etiology , Drainage , Humans , Postoperative Complications/etiology , Postoperative Complications/surgery , Prognosis , Reoperation , Wound Healing
7.
Z Exp Chir ; 11(6): 362-70, 1978.
Article in German | MEDLINE | ID: mdl-735266

ABSTRACT

First measurements of phagocytosis of neutrophilic leukocytes were made in 15 patients with peritonitis. All sorts of peritonitis were present. The measured values always show the summary of all present pathophysiologic and therapeutic influences on the phagocytic activity. It will be possible to estimate the patients resistance and the severity and prognosis of the illness. The higher risk of postoperative complications can be resulted by a reduced phagocytosis.


Subject(s)
Neutrophils/physiology , Peritonitis/physiopathology , Phagocytosis , Adolescent , Adult , Aged , Female , Humans , In Vitro Techniques , Male , Middle Aged , Peritonitis/blood , Postoperative Complications/prevention & control , Prognosis
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