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1.
Int J Syst Evol Microbiol ; 64(Pt 7): 2280-2304, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24729392

ABSTRACT

Diversity of the anaerobic Heterolobosea (Excavata: Discoba) is only poorly understood, especially in marine environments. We have isolated and cultured 16 strains of anaerobic heteroloboseid amoebae and flagellates from brackish, marine and saline anoxic habitats worldwide. Phylogenetic analyses of SSU rDNA sequences and light-microscopic observations showed that all the strains belong to the family Psalteriomonadidae, the main anaerobic lineage of Heterolobosea, and that they represent eight species from the genera Monopylocystis, Harpagon and Pseudoharpagon. Seven species are newly isolated and described here as Monopylocystis minor n. sp., Monopylocystis robusta n. sp., Monopylocystis elegans n. sp., Monopylocystis disparata n. sp., Harpagon salinus n. sp., Pseudoharpagon longus n. sp. and Pseudoharpagon tertius n. sp. Amoebae, cysts and the ultrastructure of the genus Pseudoharpagon are presented for the first time.


Subject(s)
Amoeba/classification , Phylogeny , Water Microbiology , Amoeba/genetics , Amoeba/isolation & purification , Amoeba/ultrastructure , Biodiversity , DNA, Protozoan/genetics , DNA, Ribosomal/genetics , Flagella , Geologic Sediments/microbiology , Microscopy, Electron, Transmission , Molecular Sequence Data , Seawater/microbiology , Sequence Analysis, DNA , Wetlands
2.
Protist ; 164(3): 380-410, 2013 May.
Article in English | MEDLINE | ID: mdl-23312407

ABSTRACT

The archamoebae form a small clade of anaerobic/microaerophilic flagellates or amoebae, comprising the pelobionts (mastigamoebids and pelomyxids) and the entamoebae. It is a member of the eukaryotic supergroup Amoebozoa. We examined 22 strains of 13 species of Mastigamoeba, Pelomyxa and Rhizomastix by light-microscopy and determined their SSU rRNA gene sequences. The SSU rRNA gene sequences of Pelomyxa palustris and Mastigella commutans in GenBank are shown to belong to P. stagnalis and Mastigamoeba punctachora, respectively. Five new species of free-living archamoebae are described: Mastigamoeba abducta, M. errans, M. guttula, M. lenta, and Rhizomastix libera spp. nov. A species of Mastigamoeba possibly living endosymbiotically in Pelomyxa was identified. Rhizomastix libera, the first known free-living member of that genus, is shown to be an archamoeba. R. libera possesses an ultrastructure unique within archamoebae: a rhizostyle formed from a modified microtubular cone and a flagellum with vanes. While many nominal species of pelobionts are extremely hard to distinguish by light microscopy, transient pseudopodial characters are worthy of further investigation as taxonomic markers.


Subject(s)
Archamoebae/genetics , Endolimax/genetics , Entamoeba/genetics , Evolution, Molecular , Animals , Archamoebae/classification , Archamoebae/ultrastructure , DNA, Protozoan/analysis , Endolimax/classification , Endolimax/ultrastructure , Entamoeba/classification , Entamoeba/ultrastructure , Genes, rRNA , Microscopy , Phylogeny , Sequence Analysis, DNA , Species Specificity
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