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1.
J Inorg Biochem ; 260: 112688, 2024 Nov.
Article in English | MEDLINE | ID: mdl-39111220

ABSTRACT

New-to-Nature biocatalysis has emerged as a promising tool in organic synthesis thanks to progress in protein engineering. Notably, hemeproteins have been evolved into robust catalysts for carbene and nitrene transfers and related sigmatropic rearrangements. In this work, we report the first example of a [2,3]-sigmatropic Sommelet-Hauser rearrangement initiated by a carbene transfer of the sperm whale myoglobin mutant L29S,H64V,V68F that was previously reported to catalyze the mechanistically similar [2,3]-sigmatropic Doyle-Kirmse rearrangement. This repurposed heme enzyme catalyzes the Sommelet-Hauser rearrangement between ethyl diazoacetate and benzyl thioethers bearing strong electron-withdrawing substituents with good yields and enantiomeric excess. Optimized catalytic conditions in the absence of any reductant led to an increased asymmetric induction with up to 59% enantiomeric excess. This myoglobin mutant is therefore one of the few catalysts for the asymmetric Sommelet-Hauser rearrangement. This work broadens the scope of abiological reactions catalyzed by iron-carbene transferases with a new example of asymmetric sigmatropic rearrangement.


Subject(s)
Myoglobin , Myoglobin/chemistry , Myoglobin/genetics , Myoglobin/metabolism , Methane/analogs & derivatives , Methane/chemistry , Methane/metabolism , Biocatalysis , Transferases/metabolism , Transferases/genetics , Transferases/chemistry , Animals , Sperm Whale , Protein Engineering/methods
2.
Inorg Chem ; 63(24): 11063-11078, 2024 Jun 17.
Article in English | MEDLINE | ID: mdl-38814816

ABSTRACT

In this paper, we employed a multidisciplinary approach, combining experimental techniques and density functional theory (DFT) calculations to elucidate key features of the copper coordination environment of the bacterial lytic polysaccharide monooxygenase (LPMO) from Serratia marcescens (SmAA10). The structure of the holo-enzyme was successfully obtained by X-ray crystallography. We then determined the copper(II) binding affinity using competing ligands and observed that the affinity of the histidine brace ligands for copper is significantly higher than previously described. UV-vis, advanced electron paramagnetic resonance (EPR), and X-ray absorption spectroscopy (XAS) techniques, including high-energy resolution fluorescence detected (HERFD) XAS, were further used to gain insight into the copper environment in both the Cu(II) and Cu(I) redox states. The experimental data were successfully rationalized by DFT models, offering valuable information on the electronic structure and coordination geometry of the copper center. Finally, the Cu(II)/Cu(I) redox potential was determined using two different methods at ca. 350 mV vs NHE and rationalized by DFT calculations. This integrated approach not only advances our knowledge of the active site properties of SmAA10 but also establishes a robust framework for future studies of similar enzymatic systems.


Subject(s)
Catalytic Domain , Copper , Density Functional Theory , Mixed Function Oxygenases , Serratia marcescens , Copper/chemistry , Copper/metabolism , Serratia marcescens/enzymology , Mixed Function Oxygenases/metabolism , Mixed Function Oxygenases/chemistry , Crystallography, X-Ray , Models, Molecular , Polysaccharides/chemistry , Polysaccharides/metabolism , Oxidation-Reduction
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