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1.
PLoS One ; 19(5): e0300850, 2024.
Article in English | MEDLINE | ID: mdl-38718005

ABSTRACT

Essential for muscle fiber formation and hypertrophy, muscle stem cells, also called satellite cells, reside beneath the basal lamina of the muscle fiber. Satellite cells have been commonly identified by the expression of the Paired box 7 (Pax7) due to its specificity and the availability of antibodies in tetrapods. In fish, the identification of satellite cells remains difficult due to the lack of specific antibodies in most species. Based on the development of a highly sensitive in situ hybridization (RNAScope®) for pax7, we showed that pax7+ cells were detected in the undifferentiated myogenic epithelium corresponding to the dermomyotome at day 14 post-fertilization in rainbow trout. Then, from day 24, pax7+ cells gradually migrated into the deep myotome and were localized along the muscle fibers and reach their niche in satellite position of the fibres after hatching. Our results showed that 18 days after muscle injury, a large number of pax7+ cells accumulated at the wound site compared to the uninjured area. During the in vitro differentiation of satellite cells, the percentage of pax7+ cells decreased from 44% to 18% on day 7, and some differentiated cells still expressed pax7. Taken together, these results show the dynamic expression of pax7 genes and the follow-up of these muscle stem cells during the different situations of muscle fiber formation in trout.


Subject(s)
Cell Differentiation , Oncorhynchus mykiss , PAX7 Transcription Factor , Regeneration , Satellite Cells, Skeletal Muscle , Animals , Oncorhynchus mykiss/metabolism , Oncorhynchus mykiss/genetics , PAX7 Transcription Factor/metabolism , PAX7 Transcription Factor/genetics , Satellite Cells, Skeletal Muscle/metabolism , Satellite Cells, Skeletal Muscle/cytology , Muscle Development , Gene Expression Regulation, Developmental
3.
Gene ; 790: 145688, 2021 Jul 20.
Article in English | MEDLINE | ID: mdl-33961974

ABSTRACT

In contrast to mice or zebrafish, trout exhibits post-larval muscle growth through hypertrophy and formation of new myofibers (hyperplasia). The muscle fibers are formed by the fusion of mononucleated cells (myoblasts) regulated by several muscle-specific proteins such as Myomaker or Myomixer. In this work, we identified a unique gene encoding a Myomixer protein of 77 amino acids (aa) in the trout genome. Sequence analysis and phylogenetic tree showed moderate conservation of the overall protein sequence across teleost fish (61% of aa identity between trout and zebrafish Myomixer sequences). Nevertheless, the functionally essential motif, AxLyCxL is perfectly conserved in all studied sequences of vertebrates. Using in situ hybridization, we observed that myomixer was highly expressed in the embryonic myotome, particularly in the hyperplasic area. Moreover, myomixer remained readily expressed in white muscle of juvenile (1 and 20 g) although its expression decreased in mature fish. We also showed that myomixer is up-regulated during muscle regeneration and in vitro myoblasts differentiation. Together, these data indicate that myomixer expression is consistently associated with the formation of new myofibers during somitogenesis, post-larval growth and muscle regeneration in trout.


Subject(s)
Hyperplasia/pathology , Larva/cytology , Muscle Development , Muscle Proteins/metabolism , Myoblasts/cytology , Oncorhynchus mykiss/embryology , Regeneration , Amino Acid Sequence , Animals , Hyperplasia/metabolism , Larva/metabolism , Membrane Proteins/genetics , Membrane Proteins/metabolism , Muscle Proteins/genetics , Muscle, Skeletal , Myoblasts/metabolism , Oncorhynchus mykiss/metabolism , Phylogeny , Sequence Homology
4.
J Fish Biol ; 93(6): 1171-1177, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30306563

ABSTRACT

The formation of the intramuscular connective tissue was investigated in rainbow trout Oncorhynchus mykiss by combining histological and in situ gene-expression analysis. Laminin, a primary component of basement membranes, surrounded superficial slow and deep fast muscle fibres in O. mykiss as soon as the hatching stage (c. 30 days post fertilization (dpf)). In contrast, type I collagen, the primary fibrillar collagen in muscle of vertebrates, appeared at the surface of individual slow and fast muscle fibres only at c. 90 and 110 dpf, respectively. The deposition of type I collagen in laminin-rich endomysium ensheathing individual muscle fibres correlated with the late appearance of collagen type 1 α 1 chain (col1α1) expressing fibroblasts inside slow and then fast-muscle masses. Double in situ hybridization indicated that coll1α1 expressing muscle resident fibroblasts also expressed collagen type 5 α 2 chain (col5α2) transcripts, showing that these cells are a major cellular source of fibrillar collagens within O. mykiss muscle. At c. 140 dpf, the formation of perimysium-like structure was manifested by the increase of type I collagen deposition around bundles of myofibres concomitantly with the alignment and elongation of some collagen-expressing fibroblasts. Overall, this study shows that the formation of O. mykiss intramuscular connective tissue network is completed only in aged fry when fibroblast-like cells expressing type I and V collagens arise inside of the growing myotome.


Subject(s)
Connective Tissue/metabolism , Oncorhynchus mykiss/anatomy & histology , Animals , Collagen/metabolism , Connective Tissue/embryology , Fibroblasts/metabolism , Gene Expression Profiling , In Situ Hybridization , Laminin/metabolism , Muscle Fibers, Skeletal , Muscle, Skeletal , Oncorhynchus mykiss/embryology , Oncorhynchus mykiss/genetics
5.
BMC Genomics ; 18(1): 447, 2017 06 07.
Article in English | MEDLINE | ID: mdl-28592307

ABSTRACT

BACKGROUND: Compensatory growth is a phase of rapid growth, greater than the growth rate of control animals, that occurs after a period of growth-stunting conditions. Fish show a capacity for compensatory growth after alleviation of dietary restriction, but the underlying cellular mechanisms are unknown. To learn more about the contribution of genes regulating hypertrophy (an increase in muscle fibre size) and hyperplasia (the generation of new muscle fibres) in the compensatory muscle growth response in fish, we used high-density microarray analysis to investigate the global gene expression in muscle of trout during a fasting-refeeding schedule and in muscle of control-fed trout displaying normal growth. RESULTS: The compensatory muscle growth signature, as defined by genes up-regulated in muscles of refed trout compared with control-fed trout, showed enrichment in functional categories related to protein biosynthesis and maturation, such as RNA processing, ribonucleoprotein complex biogenesis, ribosome biogenesis, translation and protein folding. This signature was also enriched in chromatin-remodelling factors of the protein arginine N-methyl transferase family. Unexpectedly, functional categories related to cell division and DNA replication were not inferred from the molecular signature of compensatory muscle growth, and this signature contained virtually none of the genes previously reported to be up-regulated in hyperplastic growth zones of the late trout embryo myotome and to potentially be involved in production of new myofibres, notably genes encoding myogenic regulatory factors, transmembrane receptors essential for myoblast fusion or myofibrillar proteins predominant in nascent myofibres. CONCLUSION: Genes promoting myofibre growth, but not myofibre formation, were up-regulated in muscles of refed trout compared with continually fed trout. This suggests that a compensatory muscle growth response, resulting from the stimulation of hypertrophy but not the stimulation of hyperplasia, occurs in trout after refeeding. The generation of a large set of genes up-regulated in muscle of refed trout may yield insights into the molecular and cellular mechanisms controlling skeletal muscle mass in teleost and serve as a useful list of potential molecular markers of muscle growth in fish.


Subject(s)
Fasting/metabolism , Gene Expression Profiling , Hypertrophy/genetics , Muscle Cells/metabolism , Muscle Cells/pathology , Up-Regulation , Animals , Muscle Development/genetics , Oncorhynchus mykiss/genetics , Oncorhynchus mykiss/growth & development
6.
BMC Genomics ; 18(1): 347, 2017 05 04.
Article in English | MEDLINE | ID: mdl-28472935

ABSTRACT

BACKGROUND: Excessive accumulation of adipose tissue in cultured fish is an outstanding problem in aquaculture. To understand the development of adiposity, it is crucial to identify the genes which expression is associated with adipogenic differentiation. Therefore, the transcriptomic profile at different time points (days 3, 8, 15 and 21) along primary culture development of rainbow trout preadipocytes has been investigated using an Agilent trout oligo microarray. RESULTS: Our analysis identified 4026 genes differentially expressed (fold-change >3) that were divided into two major clusters corresponding to the main phases observed during the preadipocyte culture: proliferation and differentiation. Proliferation cluster comprised 1028 genes up-regulated from days 3 to 8 of culture meanwhile the differentiation cluster was characterized by 2140 induced genes from days 15 to 21. Proliferation was characterized by enrichment in genes involved in basic cellular and metabolic processes (transcription, ribosome biogenesis, translation and protein folding), cellular remodelling and autophagy. In addition, the implication of the eicosanoid signalling pathway was highlighted during this phase. On the other hand, the terminal differentiation phase was enriched with genes involved in energy production, lipid and carbohydrate metabolism. Moreover, during this phase an enrichment in genes involved in the formation of the lipid droplets was evidenced as well as the activation of the thyroid-receptor/retinoic X receptor (TR/RXR) and the peroxisome proliferator activated receptors (PPARs) signalling pathways. The whole adipogenic process was driven by a coordinated activation of transcription factors and epigenetic modulators. CONCLUSIONS: Overall, our study demonstrates the coordinated expression of functionally related genes during proliferation and differentiation of rainbow trout adipocyte cells. Furthermore, the information generated will allow future investigations of specific genes involved in particular stages of fish adipogenesis.


Subject(s)
Adipocytes/physiology , Adipogenesis , Transcriptome , Animals , Cell Proliferation , Cells, Cultured , Fish Proteins/genetics , Fish Proteins/metabolism , Oncorhynchus mykiss/genetics , Oncorhynchus mykiss/metabolism , Signal Transduction , Transcription Factors/genetics , Transcription Factors/metabolism
7.
J Exp Biol ; 218(Pt 8): 1137-42, 2015 Apr 15.
Article in English | MEDLINE | ID: mdl-25657208

ABSTRACT

The dramatic increase in myotomal muscle mass in teleosts appears to be related to their sustained ability to produce new fibres in the growing myotomal muscle. To describe muscle fibre input dynamics in trout (Oncorhynchus mykiss), we generated a stable transgenic line carrying green fluorescent protein (GFP) cDNA driven by the myogenin promoter. In this myog:GFP transgenic line, muscle cell recruitment is revealed by the appearance of fluorescent, small, nascent muscle fibres. The myog:GFP transgenic line displayed fibre formation patterns in the developing trout and showed that the production of new fluorescent myofibres (muscle hyperplasia) is prevalent in the juvenile stage but progressively decreases to eventually cease at approximately 18 months post-fertilisation. However, fluorescent, nascent myofibres were formed de novo in injured muscle of aged trout, indicating that the inhibition of myofibre formation associated with trout ageing cannot be attributed to the lack of recruitable myogenic cells but rather to changes in the myogenic cell microenvironment. Additionally, the myog:GFP transgenic line demonstrated that myofibre production persists during starvation.


Subject(s)
Green Fluorescent Proteins/metabolism , Muscle Fibers, Skeletal/physiology , Myogenin/metabolism , Oncorhynchus mykiss/embryology , Oncorhynchus mykiss/growth & development , Aging , Animals , Animals, Genetically Modified , Cell Proliferation/physiology , Green Fluorescent Proteins/genetics , Muscle Development , Myogenin/genetics , Oncorhynchus mykiss/genetics , Promoter Regions, Genetic
8.
Int J Dev Biol ; 59(10-12): 505-9, 2015.
Article in English | MEDLINE | ID: mdl-26864491

ABSTRACT

An in situ screen for genes expressed in the skeletal muscle of eyed-stage trout embryos led to the identification of a transcript encoding a polypeptide related to CILP1, a secreted glycoprotein present in the extracellular matrix. In situ hybridisation in developing trout embryos revealed that CILP1 expression was initially detected in fast muscle progenitors of the early somite. Later, CILP1 expression was down-regulated medio-laterally in differentiating fast muscle cells, to become finally restricted to the undifferentiated muscle progenitors forming the dermomyotome-like epithelium at the surface of the embryonic myotome. At the completion of somitogenesis, CILP1 expression was concentrated in the myoseptal/tendon cells that develop between adjacent myotomes but was excluded from the skeletogenic cells of the vertebral axis to which the most medial myoseptal/tendon cells attach. Overall, our work shows that muscle cells and myoseptal/tendon cells contribute dynamically and cooperatively to the production of CILP1 during ontogeny of the trout musculoskeletal system.


Subject(s)
Embryo, Nonmammalian/metabolism , Fish Proteins/metabolism , Glycoproteins/metabolism , Muscle, Skeletal/metabolism , Somites/metabolism , Trout/metabolism , Amino Acid Sequence , Animals , Cell Differentiation , Embryo, Nonmammalian/cytology , Fish Proteins/genetics , Gene Expression Regulation, Developmental , Glycoproteins/genetics , In Situ Hybridization , Mesoderm/embryology , Mesoderm/metabolism , Molecular Sequence Data , Muscle, Skeletal/embryology , Sequence Homology, Amino Acid , Somites/embryology , Trout/growth & development
9.
PLoS One ; 9(3): e91876, 2014.
Article in English | MEDLINE | ID: mdl-24622730

ABSTRACT

The trunk muscle in fish is organized as longitudinal series of myomeres which are separated by sheets of connective tissue called myoseptum to which myofibers attach. In this study we show in the trout that the myoseptum separating two somites is initially acellular and composed of matricial components such as fibronectin, laminin and collagen I. However, myoseptal cells forming a continuum with skeletogenic cells surrounding axial structures are observed between adjacent myotomes after the completion of somitogenesis. The myoseptal cells do not express myogenic markers such as Pax3, Pax7 and myogenin but express several tendon-associated collagens including col1a1, col5a2 and col12a1 and angiopoietin-like 7, which is a secreted molecule involved in matrix remodelling. Using col1a1 as a marker gene, we observed in developing trout embryo an initial labelling in disseminating cells ventral to the myotome. Later, labelled cells were found more dorsally encircling the notochord or invading the intermyotomal space. This opens the possibility that the sclerotome gives rise not only to skeletogenic mesenchymal cells, as previously reported, but also to myoseptal cells. We furthermore show that myoseptal cells differ from skeletogenic cells found around the notochord by the specific expression of Scleraxis, a distinctive marker of tendon cells in amniotes. In conclusion, the location, the molecular signature and the possible sclerotomal origin of the myoseptal cells suggest that the fish myoseptal cells are homologous to the axial tenocytes in amniotes.


Subject(s)
Connective Tissue/embryology , Tendons/cytology , Tendons/embryology , Trout/embryology , Animals , Basic Helix-Loop-Helix Transcription Factors/metabolism , Collagen Type I/metabolism , Extracellular Matrix/metabolism , Gene Expression Regulation, Developmental , Mesoderm/cytology , Movement , Somites/cytology , Trout/metabolism
10.
BMC Genomics ; 14: 173, 2013 Mar 14.
Article in English | MEDLINE | ID: mdl-23497127

ABSTRACT

BACKGROUND: A unique feature of fish is that new muscle fibres continue to be produced throughout much of the life cycle; a process termed muscle hyperplasia. In trout, this process begins in the late embryo stage and occurs in both a discrete, continuous layer at the surface of the primary myotome (stratified hyperplasia) and between existing muscle fibres throughout the myotome (mosaic hyperplasia). In post-larval stages, muscle hyperplasia is only of the mosaic type and persists until 40% of the maximum body length is reached. To characterise the genetic basis of myotube neoformation in trout, we combined laser capture microdissection and microarray analysis to compare the transcriptome of hyperplastic regions of the late embryo myotome with that of adult myotomal muscle, which displays only limited hyperplasia. RESULTS: Gene expression was analysed using Agilent trout oligo microarrays. Our analysis identified more than 6800 transcripts that were significantly up-regulated in the superficial hyperplastic zones of the late embryonic myotome compared to adult myotomal muscle. In addition to Pax3, Pax7 and the fundamental myogenic basic helix-loop-helix regulators, we identified a large set of up-regulated transcriptional factors, including Myc paralogs, members of Hes family and many homeobox-containing transcriptional regulators. Other cell-autonomous regulators overexpressed in hyperplastic zones included a large set of cell surface proteins belonging to the Ig superfamily. Among the secreted molecules found to be overexpressed in hyperplastic areas, we noted growth factors as well as signalling molecules. A novel finding in our study is that many genes that regulate planar cell polarity (PCP) were overexpressed in superficial hyperplastic zones, suggesting that the PCP pathway is involved in the oriented elongation of the neofibres. CONCLUSION: The results obtained in this study provide a valuable resource for further analysis of novel genes potentially involved in hyperplastic muscle growth in fish. Ultimately, this study could yield insights into particular genes, pathways or cellular processes that may stimulate muscle regeneration in other vertebrates.


Subject(s)
Embryonic Development/genetics , Hyperplasia/genetics , Oligonucleotide Array Sequence Analysis/methods , Trout , Animals , Gene Expression Profiling , Gene Expression Regulation, Developmental , Humans , Hyperplasia/pathology , Laser Capture Microdissection , Muscle, Skeletal/cytology , Muscle, Skeletal/growth & development , Muscle, Skeletal/metabolism , Trout/genetics , Trout/growth & development
11.
J Exp Zool B Mol Dev Evol ; 318(1): 71-7, 2012 Jan 15.
Article in English | MEDLINE | ID: mdl-22057948

ABSTRACT

The objective of this study was to investigate the expression of two promyogenic cell surface adhesion receptors, N- and M-cadherin, in developing trout (Oncorhynchus mykiss) somite, taking account of the recent identification of a dermomyotome-like epithelium in teleosts. In situ hybridization showed that N-cadherin was expressed throughout the paraxial mesoderm and nascent somite. As the somite matured, N-cadherin expression disappeared ventrally from the sclerotome, and then mediolaterally from the differentiating slow and fast muscle cells of the embryonic myotome, to become finally restricted to the undifferentiated myogenic precursors forming the dermomyotome-like epithelium that surrounds the embryonic myotome. By contrast, M-cadherin, which was transcribed in the differentiating embryonic myotome, was never expressed in the dermomyotome-like epithelium. In late-stage trout embryos, M-cadherin transcript was only detected at the periphery of the expanding myotome, where muscle cells stemming from the N-cadherin positive dermomyotome-like epithelium differentiate. Collectively, our results support the view that, in trout embryo, N-cadherin is associated with muscle cell immaturity while M-cadherin is associated with muscle cell maturation and differentiation and this during the two successive phases of myogenesis.


Subject(s)
Cadherins/genetics , Gene Expression Regulation, Developmental , Muscle Development/physiology , Myoblasts/metabolism , Oncorhynchus mykiss/embryology , Animals , Cell Differentiation , Epithelium/metabolism , Gene Expression Profiling , Myoblasts/cytology , Somites/metabolism
12.
BMC Biotechnol ; 10: 39, 2010 May 17.
Article in English | MEDLINE | ID: mdl-20478014

ABSTRACT

BACKGROUND: Fish skeletal muscle growth involves the activation of a resident myogenic stem cell population, referred to as satellite cells, that can fuse with pre-existing muscle fibers or among themselves to generate a new fiber. In order to monitor the regulation of myogenic cell differentiation and fusion by various extrinsic factors, we generated transgenic trout (Oncorhynchus mykiss) carrying a construct containing the green fluorescent protein reporter gene driven by a fast myosin light chain 2 (MlC2f) promoter, and cultivated genetically modified myogenic cells derived from these fish. RESULTS: In transgenic trout, green fluorescence appeared in fast muscle fibers as early as the somitogenesis stage and persisted throughout life. Using an in vitro myogenesis system we observed that satellite cells isolated from the myotomal muscle of transgenic trout expressed GFP about 5 days post-plating as they started to fuse. GFP fluorescence persisted subsequently in myosatellite cell-derived myotubes. Using this in vitro myogenesis system, we showed that the rate of muscle cell differentiation was strongly dependent on temperature, one of the most important environmental factors in the muscle growth of poikilotherms. CONCLUSIONS: We produced MLC2f-gfp transgenic trout that exhibited fluorescence in their fast muscle fibers. The culture of muscle cells extracted from these trout enabled the real-time monitoring of myogenic differentiation. This in vitro myogenesis system could have numerous applications in fish physiology to evaluate the myogenic activity of circulating growth factors, to test interfering RNA and to assess the myogenic potential of fish mesenchymal stem cells. In ecotoxicology, this system could be useful to assess the impact of environmental factors and marine pollutants on fish muscle growth.


Subject(s)
Animals, Genetically Modified , Cell Differentiation , Muscle Development , Satellite Cells, Skeletal Muscle/cytology , Trout/genetics , Animals , Cardiac Myosins/genetics , Cells, Cultured , Green Fluorescent Proteins/genetics , Muscle Fibers, Fast-Twitch/cytology , Muscle Fibers, Fast-Twitch/metabolism , Myosin Light Chains/genetics , Promoter Regions, Genetic , Satellite Cells, Skeletal Muscle/metabolism , Temperature
13.
Int J Dev Biol ; 54(5): 913-8, 2010.
Article in English | MEDLINE | ID: mdl-20336612

ABSTRACT

Sox proteins form a family of transcription factors characterized by the presence of a DNA-binding domain called the high-mobility-group domain (HMG). The presence of a large number of potential Sox5 binding sites in the trout promoter of Pax7, a gene which has emerged as an important regulator of neural and somite development, prompted us to clone trout Sox5 and to examine its expression pattern in the developing trout embryo. Using whole mount in situ hybridisation, we show here that the Sox5 transcript is first expressed before segmentation in the whole presomitic mesoderm. In newly formed somites, Sox5 labelling was observed in myogenic progenitor cells of the posterior and anterior walls. As the somite matured rostrocaudally, Sox5 expression disappeared from the differentiating embryonic myotome, deep in the somite, to become restricted to the undifferentiated myogenic precursors forming the dermomyotome-like epithelium at the surface of the embryonic myotome. Sox5 was also expressed in the developing nervous system and in pectoral fin buds. On the whole, this work suggests a hitherto unappreciated role for Sox5 in regulating myogenic cells destined to muscle formation and growth.


Subject(s)
Fish Proteins/genetics , Gene Expression Profiling , Gene Expression Regulation, Developmental , Oncorhynchus mykiss/genetics , SOXD Transcription Factors/genetics , 5' Flanking Region/genetics , Amino Acid Sequence , Animals , Base Sequence , Cell Lineage , Cloning, Molecular , DNA, Complementary/chemistry , DNA, Complementary/genetics , Embryo, Nonmammalian/cytology , Embryo, Nonmammalian/metabolism , In Situ Hybridization , Limb Buds/embryology , Limb Buds/metabolism , Molecular Sequence Data , Muscles/cytology , Muscles/embryology , Muscles/metabolism , Nervous System/embryology , Nervous System/metabolism , Oncorhynchus mykiss/embryology , SOXD Transcription Factors/classification , SOXD Transcription Factors/metabolism , Sequence Analysis, DNA , Sequence Homology, Amino Acid
14.
J Exp Biol ; 211(Pt 7): 1163-8, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18344491

ABSTRACT

The external cell layer that surrounds the fish primary myotome provides the myogenic precursors necessary for muscle growth, suggesting that this epithelium is equivalent to the amniote dermomyotome. In this study we report the identification of a trout orthologue of the dermal marker Dermo-1, and show that trout somitic external cells, which are all potentially myogenic as indicated by the transcription of Pax7 gene, express Dermo-1. This finding and our previous observation that external cells express collagen I show that these cells have dermis-related characteristics in addition to exhibiting myogenic features. In an effort to identify novel genes expressed in the external cell epithelium we performed an in situ hybridisation screen and found both collectin sub-family member 12, a transmembrane C-type lectin, and Seraf, an EGF-like repeat autocrine factor. In situ hybridisation of staged trout embryos revealed that the expression of Dermo-1, collectin sub-family member 12 and Seraf within the external cell layer epithelium was preceded by a complex temporal and spatial expression pattern in the early somite.


Subject(s)
Cell Differentiation , Dermis/cytology , Gene Expression Regulation, Developmental , Repressor Proteins/genetics , Somites/cytology , Trout/embryology , Trout/genetics , Animals , Biomarkers/metabolism , Collectins/genetics , Collectins/metabolism , Dermis/metabolism , Embryo, Nonmammalian/cytology , Embryo, Nonmammalian/metabolism , PAX7 Transcription Factor/genetics , PAX7 Transcription Factor/metabolism , Repressor Proteins/metabolism , Somites/metabolism
15.
BMC Genomics ; 8: 438, 2007 Nov 28.
Article in English | MEDLINE | ID: mdl-18045468

ABSTRACT

BACKGROUND: Recovery growth is a phase of rapid growth that is triggered by adequate refeeding of animals following a period of weight loss caused by starvation. In this study, to obtain more information on the system-wide integration of recovery growth in muscle, we undertook a time-course analysis of transcript expression in trout subjected to a food deprivation-refeeding sequence. For this purpose complex targets produced from muscle of trout fasted for one month and from muscle of trout fasted for one month and then refed for 4, 7, 11 and 36 days were hybridized to cDNA microarrays containing 9023 clones. RESULTS: Significance analysis of microarrays (SAM) and temporal expression profiling led to the segregation of differentially expressed genes into four major clusters. One cluster comprising 1020 genes with high expression in muscle from fasted animals included a large set of genes involved in protein catabolism. A second cluster that included approximately 550 genes with transient induction 4 to 11 days post-refeeding was dominated by genes involved in transcription, ribosomal biogenesis, translation, chaperone activity, mitochondrial production of ATP and cell division. A third cluster that contained 480 genes that were up-regulated 7 to 36 days post-refeeding was enriched with genes involved in reticulum and Golgi dynamics and with genes indicative of myofiber and muscle remodelling such as genes encoding sarcomeric proteins and matrix compounds. Finally, a fourth cluster of 200 genes overexpressed only in 36-day refed trout muscle contained genes with function in carbohydrate metabolism and lipid biosynthesis. Remarkably, among the genes induced were several transcriptional regulators which might be important for the gene-specific transcriptional adaptations that underlie muscle recovery. CONCLUSION: Our study is the first demonstration of a coordinated expression of functionally related genes during muscle recovery growth. Furthermore, the generation of a useful database of novel genes associated with muscle recovery growth will allow further investigations on particular genes, pathways or cellular process involved in muscle growth and regeneration.


Subject(s)
Fish Proteins/metabolism , Gene Expression Regulation , Muscle, Skeletal/metabolism , Oncorhynchus mykiss/growth & development , Weight Gain/physiology , Animals , Fasting/physiology , Gene Expression Profiling , Oligonucleotide Array Sequence Analysis , Oligonucleotides , Oncorhynchus mykiss/metabolism , Reverse Transcriptase Polymerase Chain Reaction
16.
Dev Genes Evol ; 217(6): 469-75, 2007 Jun.
Article in English | MEDLINE | ID: mdl-17394015

ABSTRACT

NLRR-l (neuronal leucine-rich repeat-l) is a transmembrane protein that functions as a cell adhesion molecule regulating morphogenesis. A previous study in the mouse reported that the somitic expression of NLRR-1 is restricted to the dorsal lip of the dermomyotome that gives rise to the epaxial muscle. In this study, we report the expression of a NLRR-1 gene in the trout-developing somite. Whole mount in situ hybridization showed that NLRR-l transcript accumulated in a rostro-caudal wave in the adaxial slow muscle cells, which are initially found deep in the somite, immediately adjacent to the notochord. No labelling was observed in the segmental plate from which somites form. As somites mature along an anteroposterior axis, the NLRR-l-positive adaxial cells exhibited an apparent migration radially to the lateral surface of the myotome where they ultimately form the peripheral slow muscle fibres. These observations show that a NLRR-1 gene is expressed in a subpopulation of myogenic cells of the trout embryo, but the anatomical location and the fate of this subpopulation are distinct from those of the NLRR-1 positive myogenic cells in amniotes. NLRR-l was also transcribed in distinct areas of the developing nervous system including the telencephalon, the optic tectum, the cerebellum, the neural tube, the retina, and the branchial arches.


Subject(s)
Cell Movement , Embryo, Nonmammalian/metabolism , Fish Proteins/genetics , Gene Expression Regulation, Developmental , Muscle Cells/cytology , Muscle Cells/metabolism , Oncorhynchus mykiss/embryology , Amino Acid Sequence , Animals , Embryo, Nonmammalian/cytology , Fish Proteins/chemistry , Molecular Sequence Data , Oncorhynchus mykiss/genetics , Phylogeny , Somites/cytology
17.
J Exp Biol ; 207(Pt 15): 2679-84, 2004 Jul.
Article in English | MEDLINE | ID: mdl-15201300

ABSTRACT

Muscle differentiation is inhibited by members of the Id family that block the transcriptional effect of myogenic bHLH regulators by forming inactive heterodimers with them. Also, Id proteins promote cell proliferation by interacting with key regulators of the cell cycle. In order to determine the role of Id-encoding genes during fish development and especially in early myogenesis, we examined the expression patterns of Id1, Id2 and two nonallelic Id6 (Id6a and Id6b)-encoding genes in developing trout embryos. These four Id paralogs were found to exhibit discrete expression in the developing nervous system and in the eye rudiment. During the segmentation process, Id6a, Id6b and Id1 were expressed in the tail bud, the paraxial mesoderm and the ventral and dorsal domains of neoformed somites. As the somite matured in a rostrocaudal progression, the labelling for Id1 transcripts rapidly faded whereas labelling for Id6 transcripts was found to persist until at least the completion of segmentation. By contrast, Id2 transcripts were visualised transiently only in dorsal domains of neoformed somites and strongly accumulated in the pronephros. The preferential localisation of Id6a, Id6b, Id1 and Id2 transcripts within ventral and/or dorsal extremes of the developing somites, suggests that these areas, which were the last ones to express muscle-specific genes, contain dividing cells involved in somite expansion.


Subject(s)
Gene Expression , Helix-Loop-Helix Motifs/genetics , Oncorhynchus mykiss/embryology , Oncorhynchus mykiss/genetics , Repressor Proteins/metabolism , Somites/metabolism , Transcription Factors/metabolism , Amino Acid Sequence , Animals , Cell Differentiation/genetics , Cell Proliferation , Gene Expression Profiling , Gene Expression Regulation, Developmental/genetics , Histological Techniques , In Situ Hybridization , Inhibitor of Differentiation Protein 1 , Molecular Sequence Data , Multigene Family/genetics , Muscle, Skeletal/metabolism , Oncorhynchus mykiss/metabolism , Repressor Proteins/genetics , Sequence Alignment , Transcription Factors/genetics
18.
Biochem J ; 378(Pt 1): 239-46, 2004 Feb 15.
Article in English | MEDLINE | ID: mdl-14636157

ABSTRACT

Circulating levels of glucocorticoids are increased in many traumatic and muscle-wasting conditions that include insulin-dependent diabetes, acidosis, infection, and starvation. On the basis of indirect findings, it appeared that these catabolic hormones are required to stimulate Ub (ubiquitin)-proteasome-dependent proteolysis in skeletal muscles in such conditions. The present studies were performed to provide conclusive evidence for an activation of Ub-proteasome-dependent proteolysis after glucocorticoid treatment. In atrophying fast-twitch muscles from rats treated with dexamethasone for 6 days, compared with pair-fed controls, we found (i) increased MG132-inhibitable proteasome-dependent proteolysis, (ii) an enhanced rate of substrate ubiquitination, (iii) increased chymotrypsin-like proteasomal activity of the proteasome, and (iv) a co-ordinate increase in the mRNA expression of several ATPase (S4, S6, S7 and S8) and non-ATPase (S1, S5a and S14) subunits of the 19 S regulatory complex, which regulates the peptidase and the proteolytic activities of the 26 S proteasome. These studies provide conclusive evidence that glucocorticoids activate Ub-proteasome-dependent proteolysis and the first in vivo evidence for a hormonal regulation of the expression of subunits of the 19 S complex. The results suggest that adaptations in gene expression of regulatory subunits of the 19 S complex by glucocorticoids are crucial in the regulation of the 26 S muscle proteasome.


Subject(s)
Dexamethasone/pharmacology , Glucocorticoids/pharmacology , Muscle Fibers, Fast-Twitch/metabolism , Muscle, Skeletal/metabolism , Peptide Hydrolases/biosynthesis , Adenosine Triphosphatases/biosynthesis , Adenosine Triphosphatases/genetics , Animals , Chymotrypsin/metabolism , Culture Techniques , Cysteine Endopeptidases/biosynthesis , Cysteine Endopeptidases/genetics , Cysteine Endopeptidases/metabolism , Cysteine Proteinase Inhibitors/pharmacology , Endopeptidases/biosynthesis , Endopeptidases/genetics , Gene Expression Regulation , Leupeptins/pharmacology , Male , Multienzyme Complexes/biosynthesis , Multienzyme Complexes/genetics , Multienzyme Complexes/metabolism , Muscle Fibers, Fast-Twitch/drug effects , Muscle Proteins/metabolism , Muscle, Skeletal/drug effects , Muscular Atrophy/etiology , Peptide Hydrolases/genetics , Proteasome Endopeptidase Complex , Protein Subunits/biosynthesis , Protein Subunits/genetics , RNA, Messenger/metabolism , Rats , Rats, Wistar , Ubiquitins/metabolism
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