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1.
J Hum Genet ; 61(6): 515-22, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26911350

ABSTRACT

Breast and/or ovarian cancer (BOC) are among the most frequently diagnosed forms of hereditary cancers and leading cause of death in India. This emphasizes on the need for a cost-effective method for early detection of these cancers. We sequenced 141 unrelated patients and families with BOC using the TruSight Cancer panel, which includes 13 genes strongly associated with risk of inherited BOC. Multi-gene sequencing was done on the Illumina MiSeq platform. Genetic variations were identified using the Strand NGS software and interpreted using the StrandOmics platform. We were able to detect pathogenic mutations in 51 (36.2%) cases, out of which 19 were novel mutations. When we considered familial breast cancer cases only, the detection rate increased to 52%. When cases were stratified based on age of diagnosis into three categories, ⩽40 years, 40-50 years and >50 years, the detection rates were higher in the first two categories (44.4% and 53.4%, respectively) as compared with the third category, in which it was 26.9%. Our study suggests that next-generation sequencing-based multi-gene panels increase the sensitivity of mutation detection and help in identifying patients with a high risk of developing cancer as compared with sequential tests of individual genes.


Subject(s)
Breast Neoplasms/epidemiology , Breast Neoplasms/genetics , Hereditary Breast and Ovarian Cancer Syndrome/epidemiology , Hereditary Breast and Ovarian Cancer Syndrome/genetics , Mutation , Ovarian Neoplasms/epidemiology , Ovarian Neoplasms/genetics , Adult , Age of Onset , Aged , Breast Neoplasms/diagnosis , DNA Copy Number Variations , Female , Gene Deletion , Gene Duplication , Genes, BRCA1 , Genes, BRCA2 , Genetic Testing/methods , Hereditary Breast and Ovarian Cancer Syndrome/diagnosis , High-Throughput Nucleotide Sequencing , Humans , India/epidemiology , Middle Aged , Mutation Rate , Ovarian Neoplasms/diagnosis , Prevalence , Young Adult
2.
Mol Cancer ; 10: 107, 2011 Sep 01.
Article in English | MEDLINE | ID: mdl-21880153

ABSTRACT

BACKGROUND: Increasing evidence indicates that the interaction between the CXC chemokine receptor-4 (CXCR4) and its ligand CXCL12 is critical in the process of metastasis that accounts for more than 90% of cancer-related deaths. Thus, novel agents that can downregulate the CXCR4/CXCL12 axis have therapeutic potential in inhibiting cancer metastasis. METHODS: In this report, we investigated the potential of an agent, plumbagin (5-hydroxy-2-methyl-1, 4-naphthoquinone), for its ability to modulate CXCR4 expression and function in various tumor cells using Western blot analysis, DNA binding assay, transient transfection, real time PCR analysis, chromatin immunoprecipitation, and cellular migration and invasion assays. RESULTS: We found that plumbagin downregulated the expression of CXCR4 in breast cancer cells irrespective of their HER2 status. The decrease in CXCR4 expression induced by plumbagin was not cell type-specific as the inhibition also occurred in gastric, lung, renal, oral, and hepatocellular tumor cell lines. Neither proteasome inhibition nor lysosomal stabilization had any effect on plumbagin-induced decrease in CXCR4 expression. Detailed study of the underlying molecular mechanism(s) revealed that the regulation of the downregulation of CXCR4 was at the transcriptional level, as indicated by downregulation of mRNA expression, inhibition of NF-κB activation, and suppression of chromatin immunoprecipitation activity. In addition, using a virtual, predictive, functional proteomics-based tumor pathway platform, we tested the hypothesis that NF-κB inhibition by plumbagin causes the decrease in CXCR4 and other metastatic genes. Suppression of CXCR4 expression by plumbagin was found to correlate with the inhibition of CXCL12-induced migration and invasion of both breast and gastric cancer cells. CONCLUSIONS: Overall, our results indicate, for the first time, that plumbagin is a novel blocker of CXCR4 expression and thus has the potential to suppress metastasis of cancer.


Subject(s)
Antineoplastic Agents, Phytogenic/pharmacology , Cell Movement/drug effects , Gene Expression Regulation, Neoplastic/drug effects , Naphthoquinones/pharmacology , Receptors, CXCR4/metabolism , Breast Neoplasms , Cell Line, Tumor , Chemokine CXCL12/pharmacology , Chemokine CXCL12/physiology , Computer Simulation , Down-Regulation , Female , Genes, Reporter , Humans , Luciferases/biosynthesis , Luciferases/genetics , Models, Biological , NF-kappa B/genetics , NF-kappa B/metabolism , Neoplasm Invasiveness , Protein Binding , Receptors, CXCR4/genetics , Stomach Neoplasms , Transcription, Genetic/drug effects
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