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1.
Plant Biol (Stuttg) ; 24(3): 464-472, 2022 Apr.
Article in English | MEDLINE | ID: mdl-35226384

ABSTRACT

Seed germination characteristics help predict the degree of invasive success of a species based on capacity of the seeds to germinate and recruit into novel habitats. Hyptis suaveolens (L.) Poit. (Bush mint, Pignut; Lamiaceae) is an invasive plant that is spreading throughout tropical and subtropical regions worldwide. We conducted a study to understand the role of seed size dimorphism in differentiation of germination niche in H. suaveolens. We subjected small and large seeds to varying environmental conditions of temperature (°C), photoperiod (light/dark), salt (NaCl; mM), pH, osmotic potential (MPa), different soil types and ratios (clay:sand) and burial depth (cm). Different germination indices were calculated and their interaction with seed dimorphism studied. There was a significant interaction (P < 0.001) between germination indices and seed dimorphism throughout the treatments. Large seeds had higher germination percentage and rate, indicating higher germination capacity. In addition, these displayed more asynchronous germination under various environments. Small seeds, on the other hand, required a longer germination time as compared to large seeds, indicating slower germination. Differential responses of the two seed morphs to varying environmental conditions, therefore, help H. suaveolens to differentiate its germination niche and establish in heterogeneous environments. These findings will help in devising appropriate management and eradication strategies based on germination ecology of seeds.


Subject(s)
Germination , Hyptis , Seeds/physiology , Sex Characteristics , Temperature
2.
Ind Psychiatry J ; 28(2): 272-277, 2019.
Article in English | MEDLINE | ID: mdl-33223722

ABSTRACT

BACKGROUND: Spinal cord injury (SCI) patients usually experience multiple and ongoing, neurological, and other medical problems with significant damage to the social and psychological well-being of themselves and their families. MATERIALS AND METHODS: Soldiers with SCI transferred to the regional centre after suitable stabilization of their fractures and general physical condition were included in the study. The baseline assessment included a diagnostic interview and review of case notes for a comprehensive, multi-axial diagnosis. The participants were assessed using the Barthel's Index, the Hospital Anxiety and Depression Scale, the General Health Questionnaire, Quality of life (QOL) Index, AFMC stressful life event Scale, and the Social Support Survey with the current defense or coping style also being recorded. Similar assessments were repeated at 1 month, 6 months, and at 1 year after intake. RESULTS: It was noticed that the mean scores on the Hospital Anxiety and Depression Scale were below the cut-off point for diagnosable disorder, or in the mild end of the spectrum. However, the measures of psychological distress and QOL showed significantly high mean scores. Anxiety Scores showed little variation over time initially, and none of the mean differences (t values) reached statistical significance. However, when the scores of intake and those at 6 months are compared, there was a statistically significant improvement. Depression scores, on the other hand, showed a steady improvement with each assessment. General lack of well-being and psychological distress along with poor QOL remained high throughout the period of assessment with little variation over time .These morbidity measures could not be accounted for by variations in stressful life-event scores or by variations in degree of disability. Although the negative correlation between anxiety and depression scores and those on the QOL index approached conventional levels of significance, there was little correlation overall between morbidity measures and the putative modifying variables at any stage of assessment. CONCLUSIONS: Although psychological symptoms of depressive and anxious spectrum was virtually universal, psychiatric illness at syndromal intensity warranting a formal psychiatric referral and management was rare in patients with SCI in the 1st year. The general well-being and QOL were expectedly dismal throughout. Expected correlations between the measures of social support and degree of disability with the measures of anxiety, depression, subjective distress, and QOL were not demonstrated .There is a need to look beyond these and explore factors such as lack of information, physical morbidity, quality of social support, and dependence for the activities of daily living to evolve a nuanced approach toward the challenge that these clientele represent.

3.
Med Phys ; 43(11): 5808, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27806597

ABSTRACT

PURPOSE: Magnetic resonance guided teletherapy systems aspire to image the patient concurrently with the radiation delivery. Thus, the radiofrequency (RF) coils used for magnetic resonance imaging, placed on or close to patient skin and in close proximity to the treatment volume, would be irradiated leading to modifications of radiation dose to the skin and in the buildup region. The purpose of this work is to measure and assess these dose modifications due to standard off-the-shelf RF coil materials. METHODS: A typical surface coil was approximated as layered sheets of polycarbonate, copper tape, and Teflon to emulate the base, conductor, and cover, respectively. A separate investigation used additional coil materials, such as copper pipe, plastic coil housing, a typical coil padding material, and a thin copper conductor. The materials were placed in the path of a 6 MV photon beam at various distances from polystyrene phantoms in which the surface and buildup doses were measured. The experiments were performed on a clinical Varian linac with no magnetic field and with a 0.21 T electromagnet producing a magnetic field parallel to the beam central axis. The authors repeated similar experiments in the presence of a 0.22 T magnetic field oriented perpendicular to the beam central axis using an earlier linac-MR prototype, with a biplanar permanent magnet. The radiation detectors used for the measurements were two different parallel plate ion chambers and GAFChromic films. RESULTS: A typical open beam surface dose of 20% (relative to open beam Dmax) was increased to 63% by the coil padding material and to >74% by all other materials when placed in direct contact with the phantom, irrespective of magnetic field presence or orientation. Without a magnetic field, the surface dose decreased as the test materials were moved away from the phantom surface toward the radiation source, reaching between 30% and 40% at 10 cm gap between the phantom and the test materials. In the presence of the transverse magnetic field, the surface dose reduction was more rapid reaching a dose level of 30%-40% with only 3-4 cm gap. In the presence of the parallel magnetic field, as expected, the surface dose did not decrease considerably as the gap between the phantom surface and test materials was increased; the surface dose remained >60% at 10 cm gap for all tested materials except for the thin copper conductor. CONCLUSIONS: As expected, placing coil materials in direct contact with the phantom surface increases the surface dose considerably. The surface dose is reduced by creating a gap between the coil materials and phantom surface. This dose reduction happens more rapidly in the presence of a transverse magnetic field. However, the surface dose stays relatively large irrespective of the gap in the presence of a parallel magnetic field. Thus, the standard, off-the-shelf RF coils should be used with caution in integrated linac-MR systems, especially those using a parallel magnetic field orientation in which case the RF coils will probably need to be reconfigured to create open ports for the radiation beam.


Subject(s)
Magnetic Fields , Photons/therapeutic use , Radio Waves , Radiometry/instrumentation , Artifacts , Humans , Magnetic Resonance Imaging , Radiotherapy Dosage , Radiotherapy, Image-Guided , Skin/diagnostic imaging , Skin/radiation effects
4.
Med Phys ; 42(6): 2837-40, 2015 Jun.
Article in English | MEDLINE | ID: mdl-26127036

ABSTRACT

PURPOSE: Dose response to applied magnetic fields for ion chambers and solid state detectors has been investigated previously for the anticipated use in linear accelerator-magnetic resonance devices. In this investigation, the authors present the measured response of selected radiation detectors when the magnetic field is applied in the same direction as the radiation beam, i.e., a longitudinal magnetic field, to verify previous simulation only data. METHODS: The dose response of a PR06C ion chamber, PTW60003 diamond detector, and IBA PFD diode detector is measured in a longitudinal magnetic field. The detectors are irradiated with buildup caps and their long axes either parallel or perpendicular to the incident photon beam. In each case, the magnetic field dose response is reported as the ratio of detector signals with to that without an applied longitudinal magnetic field. The magnetic field dose response for each unique orientation as a function of magnetic field strength was then compared to the previous simulation only studies. RESULTS: The measured dose response of each detector in longitudinal magnetic fields shows no discernable response up to near 0.21 T. This result was expected and matches the previously published simulation only results, showing no appreciable dose response with magnetic field. CONCLUSIONS: Low field longitudinal magnetic fields have been shown to have little or no effect on the dose response of the detectors investigated and further lend credibility to previous simulation only studies.


Subject(s)
Magnetic Fields , Radiometry/instrumentation , Monte Carlo Method , Particle Accelerators
5.
Med Phys ; 41(9): 092103, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25186403

ABSTRACT

PURPOSE: MR-Linac devices under development worldwide will require standard calibration, commissioning, and quality assurance. Solid state radiation detectors are often used for dose profiles and percent depth dose measurements. The dose response of selected solid state detectors is therefore evaluated in varying transverse and longitudinal magnetic fields for this purpose. METHODS: The Monte Carlo code PENELOPE was used to model irradiation of a PTW 60003 diamond detector and IBA PFD diode detector in the presence of a magnetic field. The field itself was varied in strength, and oriented both transversely and longitudinally with respect to the incident photon beam. The long axis of the detectors was oriented either parallel or perpendicular to the photon beam. The dose to the active volume of each detector in air was scored, and its ratio to dose with zero magnetic field strength was determined as the "dose response" in magnetic field. Measurements at low fields for both detectors in transverse magnetic fields were taken to evaluate the accuracy of the simulations. Additional simulations were performed in a water phantom to obtain few representative points for beam profile and percent depth dose measurements. RESULTS: Simulations show significant dose response as a function of magnetic field in transverse field geometries. This response can be near 20% at 1.5 T, and it is highly dependent on the detectors' relative orientation to the magnetic field, the energy of the photon beam, and detector composition. Measurements at low transverse magnetic fields verify the simulations for both detectors in their relative orientations to radiation beam. Longitudinal magnetic fields, in contrast, show little dose response, rising slowly with magnetic field, and reaching 0.5%-1% at 1.5 T regardless of detector orientation. Water tank and in air simulation results were the same within simulation uncertainty where lateral electronic equilibrium is present and expectedly differed at the beam edge in transverse field orientations only. Due to the difference in design, the two detectors behaved differently. CONCLUSIONS: When transverse magnetic fields are present, great care must be taken when using diamond or diode detectors. Dose response varies with relative detector orientation, magnetic field strength, and between detectors. This response can be considerable (∼20% for both detectors). Both detectors in longitudinal fields exhibit little to no dose response as a function of magnetic field. Water tank simulations seem to suggest that the diode detector is better suited to general beam commissioning, and each detector must be investigated separately.


Subject(s)
Magnetic Fields , Radiometry/instrumentation , Air , Computer Simulation , Models, Theoretical , Monte Carlo Method , Phantoms, Imaging , Photons , Water
6.
Med Phys ; 40(8): 081701, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23927298

ABSTRACT

PURPOSE: To evaluate the metal artifacts in kilovoltage computed tomography (kVCT) images that are corrected using a normalized metal artifact reduction (NMAR) method with megavoltage CT (MVCT) prior images. METHODS: Tissue characterization phantoms containing bilateral steel inserts are used in all experiments. Two MVCT images, one without any metal artifact corrections and the other corrected using a modified iterative maximum likelihood polychromatic algorithm for CT (IMPACT) are translated to pseudo-kVCT images. These are then used as prior images without tissue classification in an NMAR technique for correcting the experimental kVCT image. The IMPACT method in MVCT included an additional model for the pair∕triplet production process and the energy dependent response of the MVCT detectors. An experimental kVCT image, without the metal inserts and reconstructed using the filtered back projection (FBP) method, is artificially patched with the known steel inserts to get a reference image. The regular NMAR image containing the steel inserts that uses tissue classified kVCT prior and the NMAR images reconstructed using MVCT priors are compared with the reference image for metal artifact reduction. The Eclipse treatment planning system is used to calculate radiotherapy dose distributions on the corrected images and on the reference image using the Anisotropic Analytical Algorithm with 6 MV parallel opposed 5×10 cm2 fields passing through the bilateral steel inserts, and the results are compared. Gafchromic film is used to measure the actual dose delivered in a plane perpendicular to the beams at the isocenter. RESULTS: The streaking and shading in the NMAR image using tissue classifications are significantly reduced. However, the structures, including metal, are deformed. Some uniform regions appear to have eroded from one side. There is a large variation of attenuation values inside the metal inserts. Similar results are seen in commercially corrected image. Use of MVCT prior images without tissue classification in NMAR significantly reduces these problems. The radiation dose calculated on the reference image is close to the dose measured using the film. Compared to the reference image, the calculated dose difference in the conventional NMAR image, the corrected images using uncorrected MVCT image, and IMPACT corrected MVCT image as priors is ∼15.5%, ∼5%, and ∼2.7%, respectively, at the isocenter. CONCLUSIONS: The deformation and erosion of the structures present in regular NMAR corrected images can be largely reduced by using MVCT priors without tissue segmentation. The attenuation value of metal being incorrect, large dose differences relative to the true value can result when using the conventional NMAR image. This difference can be significantly reduced if MVCT images are used as priors. Reduced tissue deformation, better tissue visualization, and correct information about the electron density of the tissues and metals in the artifact corrected images could help delineate the structures better, as well as calculate radiation dose more correctly, thus enhancing the quality of the radiotherapy treatment planning.


Subject(s)
Artifacts , Metals , Radiotherapy, Computer-Assisted/methods , Tomography, X-Ray Computed/methods , Humans , Image Processing, Computer-Assisted , Phantoms, Imaging , Radiometry
7.
Med Phys ; 40(4): 042102, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23556912

ABSTRACT

PURPOSE: The magnetic fields of an integrated MR-Linac system will alter the paths of electrons that produce ions in the ionization chambers. The dose response of selected ion chambers is evaluated in the presence of varying transverse and longitudinal magnetic fields. The investigation is useful in calibration of therapeutic x-ray beams associated with MR-Linac systems. METHODS: The Monte Carlo code PENELOPE was used to model the irradiation of NE2571, and PR06C ionization chambers in the presence of a transverse and longitudinal (with respect to the photon beam) magnetic fields of varying magnitude. The long axis of each chamber was simulated both parallel and perpendicular to the incident photon beam for each magnetic field case. The dose deposited in each chamber for each case was compared to the case with zero magnetic field by means of a ratio. The PR06C chamber's response was measured in the presence of a transverse magnetic field with field strengths ranging from 0.0 to 0.2 T to compare to simulated results. RESULTS: The simulations and measured data show that in the presence of a transverse magnetic field there is a considerable dose response (maximum of 11% near 1.0 T in the ion chambers investigated, which depends on the magnitude of magnetic field, and relative orientation of the magnetic field, radiation beam, and ion chamber. Measurements made with the PR06C chamber verify these results in the region of measurement. In contrast, a longitudinal magnetic field produces only a slight increase in dose response (2% at 1.5 T) that rises slowly with increasing magnetic field and is seemingly independent of chamber orientation. Response trends were similar for the two ion chambers and relative orientations considered, but slight variations are present from chamber to chamber. CONCLUSIONS: Care must be taken when making ion chamber measurements in a transverse magnetic field. Ion chamber responses vary not only with transverse field strength, but with chamber orientation and type, and can be considerable. Longitudinal magnetic fields influence ion chamber responses relatively little (2% at 1.5 T), and only at field strengths in excess of 1.0 T.


Subject(s)
Magnetic Fields , Models, Theoretical , Radiometry/instrumentation , Computer Simulation , Computer-Aided Design , Dose-Response Relationship, Radiation , Radiation Dosage , Reproducibility of Results , Sensitivity and Specificity
8.
Med Phys ; 39(11): 6597-608, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23127054

ABSTRACT

PURPOSE: This investigation provides measurements of signal lag and nonlinearity separately for the Varian aS500 electronic portal imaging device (EPID), and an algorithm to correct for these effects in 2D; their potential impact on intensity modulated radiation therapy (IMRT) verification is also investigated. The authors quantify lag, as a function of both delivered monitor units (MU) and time, by using a range of MUs delivered at a clinically used rate of 400 MU∕min. Explicit cumulative lag curves are thus determined for a range of MUs and times between the end of irradiation and the end of image acquisition. Signal nonlinearity is also investigated as a function of total MUs delivered. The family of cumulative lag curves and signal nonlinearity are then used to determine their effects on dynamic multileaf collimator (MLC) (IMRT) deliveries, and to correct for theses effects in 2D. METHODS: Images acquired with an aS500 EPID and Varis Portal-Vision software were used to quantify detector lag and signal-nonlinearity. For the signal lag investigation, Portal-Vision's service monitor was used to acquire EPID images at a rate of 8 frames/s. The images were acquired during irradiation and 66 s thereafter, by inhibiting the M-holdoff-In signal of the Linac for a range of 4.5-198.5 MUs. Relative cumulative lag was calculated by integrating the EPID signal for a time after beam-off, and normalizing this to the integrated EPID signal accumulated during radiation. Signal nonlinearity was studied by acquiring 10 × 10 cm(2) open-field EPID images in "integrated image" mode for a range of 2-500 MUs, and normalized to the 100 MU case. All data were incorporated into in-house written software to create a 2D correction map for these effects, using the field's MLC file and a field-specific calculated 2D "time-map," which keeps track of the time elapsed from the last fluence delivered at each given point in the image to the end of the beam delivery. RESULTS: Relative cumulative lag curves reveal that the lag alone can deviate the EPID's perceived dose by as large as 6% (1 MU delivery, 60 s postirradiation). For signal nonlinearity relative to 100 MU, EPID signals per MU of 0.84 and 1.01 were observed for 2 and 500 MUs, respectively. Correction maps were applied to a 1 cm sweeping-window 14 × 14 cm(2) field and clinical head-and-neck IMRT field. A mean correction of 1.028 was implemented in the head-and-neck field, which significantly reduced lag-related asymmetries in the EPID images, and restored linearity to the EPID imager's dose response. Corrections made to the sweeping-field showed good agreement with the treatment planning system-predicted field, yielding an average percent difference of 0.05% ± 0.91%, compared to the -1.32% ± 1.02% before corrections, or 1.75% ± 1.04% when only a signal nonlinearity correction is made. CONCLUSIONS: Lag and signal-nonlinearity have been quantified for an aS500 EPID imager, and an effective 2D correction method has been developed which effectively removes nonlinearity and lag effects. Both of these effects were shown to negatively impact IMRT verifications. Especially fields that involve prolonged irradiation and small overall MUs should be corrected for in 2D.


Subject(s)
Electrical Equipment and Supplies , Nonlinear Dynamics , Radiometry/instrumentation , Silicon/chemistry , Radiotherapy Dosage , Radiotherapy, Intensity-Modulated
9.
Med Phys ; 39(10): 6297-308, 2012 Oct.
Article in English | MEDLINE | ID: mdl-23039665

ABSTRACT

PURPOSE: To evaluate the performance of a model based image reconstruction method in reducing metal artifacts in the megavoltage computed tomography (MVCT) images of a phantom representing bilateral hip prostheses and to compare with the filtered-backprojection (FBP) technique. METHODS: An iterative maximum likelihood polychromatic algorithm for CT (IMPACT) is used with an additional model for the pair∕triplet production process and the energy dependent response of the detectors. The beam spectra for an in-house bench-top and TomoTherapy™ MVCTs are modeled for use in IMPACT. The empirical energy dependent response of detectors is calculated using a constrained optimization technique that predicts the measured attenuation of the beam by various thicknesses (0-24 cm) of solid water slabs. A cylindrical (19.1 cm diameter) plexiglass phantom containing various cylindrical inserts of relative electron densities 0.295-1.695 positioned between two steel rods (2.7 cm diameter) is scanned in the bench-top MVCT that utilizes the bremsstrahlung radiation from a 6 MeV electron beam passed through 4 cm solid water on the Varian Clinac 2300C and in the imaging beam of the TomoTherapy™ MVCT. The FBP technique in bench-top MVCT reconstructs images from raw signal normalized to air scan and corrected for beam hardening using a uniform plexiglass cylinder (20 cm diameter). The IMPACT starts with a FBP reconstructed seed image and reconstructs the final image in 150 iterations. RESULTS: In both MVCTs, FBP produces visible dark shading in the image connecting the steel rods. In the IMPACT reconstructed images this shading is nearly removed and the uniform background is restored. The average attenuation coefficients of the inserts and the background are very close to the corresponding values in the absence of the steel inserts. In the FBP images of the bench-top MVCT, the shading causes 4%-9.5% underestimation of electron density at the central inserts with an average of (6.3 ± 1.8)% for the range of electron densities studied. In the uniform plexiglass background, the shadow creates 0.8%-4.7% underestimation of electron density with an average of (2.9 ± 1.2)%. In the corresponding IMPACT images, the underestimation in the shaded plexiglass background is 0.3%-1.8% with an average of (0.9 ± 0.5)% and 1.4%-6.8% with an average of (2.8 ± 2.7)% in the central insert region. In the FBP images of the TomoTherapy™ MVCT, this shading creates 2.6%-6.7% underestimation of electron density with an average of (3.7 ± 1.4)% at the central inserts and 5.9%-7.2% underestimation in the background with an average of (6.4 ± 0.5)%. In the IMPACT images, the uniform background between the steel rods is restored with 0.3%-1.0% underestimation of electron density with an average of (0.7 ± 0.3)%. The corresponding underestimation at the central inserts of the IMPACT images is -0.4%-0.1% with an average of (-0.1 ± 0.2)%. CONCLUSIONS: The shading metal artifact has been nearly removed in MVCT images using the IMPACT algorithm with the accurate geometry of the system, proper modeling of energy dependent response of detectors, and all relevant photon interaction processes. This results less than 1% difference in electron density in the background plexiglass and less than 3% averaged over the range of electron densities investigated.


Subject(s)
Artifacts , Image Processing, Computer-Assisted/methods , Metals , Models, Theoretical , Tomography, X-Ray Computed/methods , Algorithms , Calibration
10.
Med Phys ; 39(10): 6509-21, 2012 Oct.
Article in English | MEDLINE | ID: mdl-23039685

ABSTRACT

PURPOSE: The magnetic fields of linac-MR systems modify the path of contaminant electrons in photon beams, which alters patient skin dose. To accurately quantify the magnitude of changes in skin dose, the authors use Monte Carlo calculations that incorporate realistic 3D magnetic field models of longitudinal and transverse linac-MR systems. METHODS: Finite element method (FEM) is used to generate complete 3D magnetic field maps for 0.56 T longitudinal and transverse linac-MR magnet assemblies, as well as for representative 0.5 and 1.0 T Helmholtz MRI systems. EGSnrc simulations implementing these 3D magnetic fields are performed. The geometry for the BEAMnrc simulations incorporates the Varian 600C 6 MV linac, magnet poles, the yoke, and the magnetic shields of the linac-MRIs. Resulting phase-space files are used to calculate the central axis percent depth-doses in a water phantom and 2D skin dose distributions for 70 µm entrance and exit layers using DOSXYZnrc. For comparison, skin doses are also calculated in the absence of magnetic field, and using a 1D magnetic field with an unrealistically large fringe field. The effects of photon field size, air gap (longitudinal configuration), and angle of obliquity (transverse configuration) are also investigated. RESULTS: Realistic modeling of the 3D magnetic fields shows that fringe fields decay rapidly and have a very small magnitude at the linac head. As a result, longitudinal linac-MR systems mostly confine contaminant electrons that are generated in the air gap and have an insignificant effect on electrons produced further upstream. The increase in the skin dose for the longitudinal configuration compared to the zero B-field case varies from ∼1% to ∼14% for air gaps of 5-31 cm, respectively. (All dose changes are reported as a % of D(max).) The increase is also field-size dependent, ranging from ∼3% at 20 × 20 cm(2) to ∼11% at 5 × 5 cm(2). The small changes in skin dose are in contrast to significant increases that are calculated for the unrealistic 1D magnetic field. For the transverse configuration, the entrance skin dose is equal or smaller than that of the zero B-field case for perpendicular beams. For a 10 × 10 cm(2) oblique beam the transverse magnetic field decreases the entry skin dose for oblique angles less than ±20° and increases it by no more than 10% for larger angles up to ±45°. The exit skin dose is increased by 42% for a 10 × 10 cm(2) perpendicular beam, but appreciably drops and approaches the zero B-field case for large oblique angles of incidence. CONCLUSIONS: For longitudinal linac-MR systems only a small increase in the entrance skin dose is predicted, due to the rapid decay of the realistic magnetic fringe fields. For transverse linac-MR systems, changes to the entrance skin dose are small for most scenarios. For the same geometry, on the exit side a fairly large increase is observed for perpendicular beams, but significantly drops for large oblique angles of incidence. The observed effects on skin dose are not expected to limit the application of linac-MR systems in either the longitudinal or transverse configuration.


Subject(s)
Finite Element Analysis , Magnetic Fields , Magnetic Resonance Imaging/methods , Monte Carlo Method , Radiation Dosage , Skin/radiation effects , Benchmarking
11.
Med Phys ; 39(6Part8): 3687, 2012 Jun.
Article in English | MEDLINE | ID: mdl-28518915

ABSTRACT

PURPOSE: To quantitatively evaluate a lung tumour autocontouring algorithm using in-vivo lung cancer patient MR images with varying contrast to noise ratios (CNR) simulating images acquired at various MR field strengths. METHODS: A non small cell lung cancer patient with posterior lung tumour is imaged (sagittal plane) in a 3T MRI using a dynamic bSSFP sequence (FOV: 40×40cm2 , voxel size: 3.1×3.1×20mm3 , TE = 1.1ms. TR = 2.2ms, 275ms per image) under free breathing for approximately 3 minutes (650 images). Gaussian random noise is added to the 3T images to approximately simulate the equivalent CNR in images acquired at 1.5T, 1.0T, 0.5T, 0.3T and 0.2T. The moving tumour in all 3T images is contoured by a physician for reference. The first 20 of these manual contours are used for the parameters optimization of auto-contouring algorithm. The automatic contours from the remaining images are quantitatively compared with the physician's contours using the centroid's displacement and the Dice's coefficient (DC). RESULTS: The oncologist's contours of the 3T images show a maximum S-I motion of 26mm. Compared to the oncologist's contours, automatic contours have an average centroid displacement of 1.37mm, and an average DC of 0.881. The autocontouring algorithm's performance with images in the range of 1.5T to 0.5T equivalent CNRs is similar to that of the 3T data. However, for the lowest CNR datasets (0.2, 0.3T) an increase in centroid displacement and decrease in DC is observed, with mean displacements of 1.56mm, 1.71mm and DCs of 0.870, 0.836 for the 0.3T and 0.2T dataset, respectivelyConclusions: With in-vivo MR images, the autocontouring algorithm generated lung tumour contours similar to ones drawn by a physician (DC 〉 0.83). In this patient, additional CNR from 〉0.5T MRIs does not provide statistically significant improvement in the accuracy of our autocontouring software. E.Yip is supported by the Canadian Institutes of Health Research as well as Alberta Innovates - Health Solutions.

12.
Med Phys ; 39(6Part9): 3704-3705, 2012 Jun.
Article in English | MEDLINE | ID: mdl-28519035

ABSTRACT

PURPOSE: To determine the relative dose response of a diamond detector and a ion chamber in a clinical photon beam within uniform magnetic fields, endeavoring to evaluate and refine reference dosimetry techniques for use in integrated MR-linac systems. METHODS: The Monte Carlo code PENELOPE was used to model the structure and materials of the PTW60003 diamond detector and PR06 ion chamber in a 6MV beam in the presence of a homogeneous magnetic field. The magnetic field strength was varied from 0 to 1.5T, and both the parallel and transverse magnetic field orientations with respect to the beam central axis were simulated. The long axes of the detectors were oriented both perpendicular and parallel to the radiation beam direction for each magnetic field orientation. All simulations determined the detectors' signal in air. A small electromagnet was used to experimentally determine the detectors' response in transverse magnetic fields up to 0.2T to validate the simulations. RESULTS: The simulated response of both detectors matched to the experimental data within the estimation error. The relative response of PR06 and diamond detector varied up to ±8.5% (depending on chamber orientation) and >9% respectively with increasing transverse magnetic field strength. In contrast, both detectors were found to be relatively insensitive to the increasing magnetic fields irrespective of the detector orientation in parallel magnetic field. A maximum change of 2% in PR06 response was observed at 1.5T parallel magnetic field and in the parallel orientation of chamber. CONCLUSION: This work has significant impact on dosimetry protocols for integrated MR-linac systems, where detector response may be altered by the presence of a magnetic field. The need for a magnetic field dependent correction factor is strongly indicated for the transverse magnetic field cases, while such changes in detector response can be largely ignored in parallel magnetic fields < 1T. CIHR (Canadian Institutes of Health Research) - funding support Faculty of Medicine and Dentistry, University of Alberta - funding support.

13.
Med Phys ; 39(6Part27): 3957, 2012 Jun.
Article in English | MEDLINE | ID: mdl-28519968

ABSTRACT

PURPOSE: This study quantifies the effects of the magnetic field of a longitudinal linac-MR system (B-field parallel to beam direction) on skin dose due to the confinement of contaminant electrons, using Monte Carlo calculations and realistic 3-D models of the magnetic field. METHODS: The complete realistic 3-D magnetic fields generated by the bi-planar Linac-MR magnet assembly are calculated with the finite element method using Opera- 3D. EGSnrc simulations are performed in the presence of ∼0.6T and IT MRI fields that have realistic rapid fall-off of the fringe field. The simulation geometry includes a Varian 600C 6MV linac, the yoke and magnetic shields of the MRIs, and features an isocentre distance of 126 cm. Phase spaces at the surface of a water phantom are scored using BEAMnrc; DOSXYZnrc is used to score the resulting CAX percent depth-doses in the phantom and the 2D skin dose distributions in the first 70 urn layer. For comparison, skin doses are also calculated in the absence of magnetic field and using a 1-D magnetic field with an unrealistic fringe field. The effects of field size and air gap (between phantom surface and magnet pole) are also examined. RESULTS: Analysis of the phase-space and dose distributions reveals that significant containment of electrons occurs primarily close to the uniform magnetic field region. The increase in skin dose due to the magnetic field depends on the air gap, varying from 1% to 13% for air gaps of 5 to 31 cm, respectively. The increase is also field-size dependent, varying from 3% at 20×20 cm2 to 11% at 5×5 cm2. CONCLUSIONS: Calculations based on various realistic MRI 3D magnetic-field maps that appropriately account for the rapid decay of the fringe field show that the increase in the patient skin dose of a longitudinal Linac-MR system is clinically insignificant.

14.
Med Phys ; 39(6Part6): 3655-3656, 2012 Jun.
Article in English | MEDLINE | ID: mdl-28517570

ABSTRACT

PURPOSE: To evaluate the performance of a model based image reconstruction in reducing metal artifacts in MVCT systems, and to compare with filtered-back projection (FBP) technique. METHODS: Iterative maximum likelihood polychromatic algorithm for CT (IMPACT) is used with pair/triplet production process and the energy dependent response of detectors. The beam spectra for in-house bench-top and TomotherapyTM MVCT are modelled for use in IMPACT. The energy dependent gain of detectors is calculated using a constrained optimization technique and measured attenuation produced by 0 - 24 cm thick solid water slabs. A cylindrical (19 cm diameter) plexiglass phantom containing various central cylindrical inserts (relative electron density of 0.28-1.69) between two steel rods (2 cm diameter) is scanned in the bench-top [the bremsstrahlung radiation from 6 MeV electron beam passed through 4 cm solid water on the Varian Clinac 2300C] and TomotherapyTM MVCTs. The FBP reconstructs images from raw signal normalised to air scan and corrected for beam hardening using a uniform plexi-glass cylinder (20 cm diameter). IMPACT starts with FBP reconstructed seed image and reconstructs final image at 1.25 MeV in 150 iterations. RESULTS: FBP produces a visible dark shading in the image between two steel rods that becomes darker with higher density central insert causing 5-8 % underestimation of electron density compared to the case without the steel rods. In the IMPACT image the dark shading connecting the steel rods is nearly removed and the uniform background restored. The average attenuation coefficients of the inserts and the background are very close to the corresponding theoretical values at 1.25 MeV. CONCLUSIONS: The dark shading metal artifact due to beam hardening can be removed in MVCT using the iterative reconstruction algorithm such as IMPACT. However, the accurate modelling of detectors' energy dependent response and physical processes are crucial for successful implementation. Funding support for the research is obtained from "Vanier Canada Graduate Scholarship" and "Canadian Institute of Health Research".

15.
Med Phys ; 37(9): 4722-32, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20964190

ABSTRACT

PURPOSE: There is interest in developing linac-MR systems for MRI-guided radiation therapy. To date, the designs for such linac-MR devices have been restricted to a transverse geometry where the static magnetic field is oriented perpendicular to the direction of the incident photon beam. This work extends possibilities in this field by proposing and examining by Monte Carlo simulations, a probable longitudinal configuration where the magnetic field is oriented in the same direction as the photon beam. METHODS: The EGSnrc Monte Carlo (MC) radiation transport codes with algorithms implemented to account for the magnetic field deflection of charged particles were used to compare dose distributions for linac-MR systems in transverse and longitudinal geometries. Specifically, the responses to a 6 MV pencil photon beam incident on water and lung slabs were investigated for 1.5 and 3.0 T magnetic fields. Further a five field lung plan was simulated in the longitudinal and transverse geometries across a range of magnetic field strengths from 0.2 through 3.0 T. RESULTS: In a longitudinal geometry, the magnetic field is shown to restrict the radial spread of secondary electrons to a small degree in water, but significantly in low density tissues such as lung in contrast to the lateral shift in dose distribution seen in the transverse geometry. These effects extend to the patient case, where the longitudinal configuration demonstrated dose distributions more tightly confined to the primary photon fields, which increased dose to the planning target volume (PTV), bettered dose homogeneity within a heterogeneous (in density) PTV, and reduced the tissue interface effects associated with the transverse geometry. CONCLUSIONS: Dosimetry issues observed in a transverse linac-MR geometry such as changes to the depth dose distribution and tissue interface effects were significantly reduced or eliminated in a longitudinal geometry on a representative lung plan. Further, an increase in dose to the PTV, resulting from the magnetic field confining electrons to the forward direction, shows potential for a reduction in dose to the surrounding tissues.


Subject(s)
Lung Neoplasms/radiotherapy , Magnetic Resonance Imaging/methods , Magnetics , Humans , Lung Neoplasms/diagnosis , Radiometry , Radiotherapy Dosage , Rotation
16.
Med Phys ; 37(5): 2131-4, 2010 May.
Article in English | MEDLINE | ID: mdl-20527546

ABSTRACT

PURPOSE: Linac-MR systems for real-time image-guided radiotherapy will utilize the multileaf collimators (MLCs) to perform conformal radiotherapy and tumor tracking. The MLCs would be exposed to the external fringe magnetic fields of the linac-MR hybrid systems. Therefore, an experimental investigation of the effect of an external magnetic field on the brushed permanent magnet DC motors used in some MLC systems was performed. METHODS: The changes in motor speed and current were measured for varying external magnetic field strengths up to 2000 G generated by an EEV electromagnet. These changes in motor characteristics were measured for three orientations of the motor in the external magnetic field, mimicking changes in motor orientations due to installation and/or collimator rotations. In addition, the functionality of the associated magnetic motor encoder was tested. The tested motors are used with the Varian 120 leaf Millennium MLC (Maxon Motor half leaf and full leaf motors) and the Varian 52 leaf MKII MLC (MicroMo Electronics leaf motor) including a carriage motor (MicroMo Electronics). RESULTS: In most cases, the magnetic encoder of the motors failed prior to any damage to the gearbox or the permanent magnet motor itself. This sets an upper limit of the external magnetic field strength on the motor function. The measured limits of the external magnetic fields were found to vary by the motor type. The leaf motor used with a Varian 52 leaf MKII MLC system tolerated up to 450 +/- 10 G. The carriage motor tolerated up to 2000 +/- 10 G field. The motors used with the Varian 120 leaf Millennium MLC system were found to tolerate a maximum of 600 +/- 10 G. CONCLUSIONS: The current Varian MLC system motors can be used for real-time image-guided radiotherapy coupled to a linac-MR system, provided the fringe magnetic fields at their locations are below the determined tolerance levels. With the fringe magnetic fields of linac-MR systems expected to be larger than the tolerance levels determined, some form of magnetic shielding would be required.


Subject(s)
Magnetics , Radiotherapy, Computer-Assisted/methods , Electric Conductivity , Kinetics
17.
Med Phys ; 37(1): 249-57, 2010 Jan.
Article in English | MEDLINE | ID: mdl-20175488

ABSTRACT

PURPOSE: Megavoltage computed tomography (MVCT) and megavoltage cone beam computed tomography (MVCBCT) can be used for visualizing anatomical structures prior to radiation therapy treatments to assist in patient setup and target localization. These systems are less susceptible to metal artifacts and provide better CT number linearity than conventional CT scanners. However, their contrast is limited by the properties of the megavoltage photons and the low detective quantum efficiency (DQE) of flat panel detector systems currently available. By using higher DQE, thick, segmented cadmium tungstate detectors, the authors can improve the low contrast detectability of a MVCT system. This in turn would permit greater soft tissue visualization for a given radiation dose, allowing MVCT to be used in more clinical situations. METHODS: This article describes the evaluation of our prototype system that uses thick, segmented detectors. In order to create images using a dose that would be acceptable for day to day patient imaging, the authors evaluated their system using the low intensity bremsstrahlung component of a 6 MeV electron beam. The system was evaluated for its uniformity, high contrast resolution, low contrast detectability, signal to noise ratio, contrast to noise ratio, and CT number linearity. RESULTS: The prototype system was found to have a high contrast spatial resolution of about 5 line pairs per cm, and to be able to visualize a 15 mm 1.5% contrast target with 2 cGy of radiation dose delivered. SNR2 vs radiation dose and mean pixel value vs electron density curves were linear. CONCLUSIONS: This prototype system shows a large improvement in low contrast detectability over current MVCBCT systems.


Subject(s)
Cadmium Compounds/chemistry , Radiographic Image Enhancement/instrumentation , Tomography, X-Ray Computed/instrumentation , Transducers , Tungsten Compounds/chemistry , Computer-Aided Design , Equipment Design , Equipment Failure Analysis , Pilot Projects , Radiographic Image Enhancement/methods , Reproducibility of Results , Semiconductors , Sensitivity and Specificity
18.
Phys Med Biol ; 55(4): 995-1006, 2010 Feb 21.
Article in English | MEDLINE | ID: mdl-20090181

ABSTRACT

The real-time operation of a linac-MRI system will require proper radio frequency (RF) shielding such that the MRI images can be acquired without extraneous RF noise from the linac. We report on the steps taken to successfully shield the linac from the MRI such that the two devices can operate independently of one another. RF power density levels are reported internally and externally to the RF cage which houses the linac and MRI. The shielding effectiveness of the RF cage has been measured in the frequency range 1-50 MHz and is presented. Lastly MRI images of two phantoms are presented during linac operation. This work illustrates that the accelerating structure of a linac and an MRI can be housed within the same RF cage. The 6 MV linac can be operated to produce radiation with no measurable degradation in image quality due to RF effects.


Subject(s)
Magnetic Resonance Imaging/instrumentation , Radio Waves , Radiosurgery/instrumentation , Algorithms , Artifacts , Magnetic Resonance Imaging/methods , Phantoms, Imaging , Radiosurgery/methods
19.
Phys Med Biol ; 55(4): 981-94, 2010 Feb 21.
Article in English | MEDLINE | ID: mdl-20090187

ABSTRACT

Currently several groups are actively researching the integration of a megavoltage teletherapy unit with magnetic resonance (MR) imaging for real-time image-guided radiotherapy. The use of a multileaf collimator (MLC) for intensity-modulated radiotherapy for linac-MR units must be investigated. The MLC itself will likely reside in the fringe field of the MR and the motors will produce radio frequency (RF) noise. The RF noise power spectral density from a Varian 52-leaf MLC motor, a Varian Millennium MLC motor and a brushless fan motor has been measured as a function of the applied magnetic field using a near field probe set. For the Varian 52-leaf MLC system, the RF noise produced by 13 of 52 motors is studied as a function of distance from the MLC. Data are reported in the frequency range suitable for 0.2-1.5 T linac-MR systems. Below 40 MHz the Millennium MLC motor tested showed more noise than the Varian 52-leaf motor or the brushless fan motor. The brushless motor showed a small dependence on the applied magnetic field. Images of a phantom were taken by the prototype linac-MR system with the MLC placed in close proximity to the magnet. Several orientations of the MLC in both shielded and non-shielded configurations were studied. For the case of a non-shielded MLC and associated cables, the signal-to-noise ratio (SNR) was reduced when 13 of 52 MLC leaves were moved during imaging. When the MLC and associated cables were shielded, the measured SNR of the images with 13 MLC leaves moving was experimentally the same as the SNR of the stationary MLC image. When the MLC and cables are shielded, subtraction images acquired with and without MLC motion contains no systematic signal. This study illustrates that the small RF noise produced by functioning MLC motors can be effectively shielded to avoid SNR degradation. A functioning MLC can be incorporated into a linac-MR unit.


Subject(s)
Artifacts , Magnetic Resonance Imaging/instrumentation , Radio Waves , Algorithms , Electromagnetic Fields , Feasibility Studies , Magnetic Resonance Imaging/methods , Phantoms, Imaging , Radiotherapy, Intensity-Modulated/instrumentation , Radiotherapy, Intensity-Modulated/methods
20.
Phys Med Biol ; 55(3): 735-46, 2010 Feb 07.
Article in English | MEDLINE | ID: mdl-20071754

ABSTRACT

The integration of medical linear accelerators (linac) with magnetic resonance imaging (MRI) systems is advancing the current state of image-guided radiotherapy. The MRI in these integrated units will provide real-time, accurate tumor locations for radiotherapy treatment, thus decreasing geometric margins around tumors and reducing normal tissue damage. In the real-time operation of these integrated systems, the radiofrequency (RF) coils of MRI will be irradiated with radiation pulses from the linac. The effect of pulsed radiation on MRI radio frequency (RF) coils is not known and must be studied. The instantaneous radiation induced current (RIC) in two different MRI RF coils were measured and presented. The frequency spectra of the induced currents were calculated. Some basic characterization of the RIC was also done: isolation of the RF coil component responsible for RIC, dependence of RIC on dose rate, and effect of wax buildup placed on coil on RIC. Both the time and frequency characteristics of the RIC were seen to vary with the MRI RF coil used. The copper windings of the RF coils were isolated as the main source of RIC. A linear dependence on dose rate was seen. The RIC was decreased with wax buildup, suggesting an electronic disequilibrium as the cause of RIC. This study shows a measurable RIC present in MRI RF coils. This unwanted current could be possibly detrimental to the signal to noise ratio in MRI and produce image artifacts.


Subject(s)
Electromagnetic Fields , Magnetic Resonance Imaging/instrumentation , Particle Accelerators/instrumentation , Radiation , Copper/radiation effects , Linear Models , Microwaves , Oscillometry , Radiation Dosage , Spectrum Analysis , Time Factors
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