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1.
Biofouling ; 39(3): 303-315, 2023 03.
Article in English | MEDLINE | ID: mdl-37226999

ABSTRACT

Coaggregation, the specific recognition and adhesion of genetically distinct bacteria, is proposed to contribute to the development of freshwater biofilms. This work aimed to develop a microplate-based system to measure and model the kinetics of freshwater bacterial coaggregation. Blastomonas natatoria 2.1 and Micrococcus luteus 2.13 were evaluated for coaggregation ability using 24-well microplates containing novel dome shaped wells (DSWs) and standard flat-bottom wells. Results were compared to a tube-based visual aggregation assay. The DSWs facilitated the reproducible detection of coaggregation via spectrophotometry and the estimation of coaggregation kinetics using a linked mathematical model. Quantitative analysis using DSWs was more sensitive than the visual tube aggregation assay and subject to substantially less variation than flat-bottom wells. Collectively these results demonstrate the utility of the DSW-based method and improve upon the current toolkit for studying freshwater bacterial coaggregation.


Subject(s)
Bacterial Adhesion , Biofilms , Kinetics , Fresh Water/microbiology , Spectrophotometry
2.
Mol Oral Microbiol ; 33(2): 143-154, 2018 04.
Article in English | MEDLINE | ID: mdl-29139600

ABSTRACT

Biofilm formation and cell-cell sensing by the pioneer dental plaque colonizer Streptococcus gordonii are dependent upon arginine. This study aimed to identify genetic factors linking arginine-dependent responses and biofilm formation in S. gordonii. Isogenic mutants disrupted in genes required for the biosynthesis or catabolism of arginine, or for arginine-dependent gene regulation, were screened for their ability to form biofilms in a static culture model. Biofilm formation by a knockout mutant of arcR, encoding an arginine-dependent regulator of transcription, was reduced to < 50% that of the wild-type whereas other strains were unaffected. Complementation of S. gordonii ∆arcR with a plasmid-borne copy of arcR restored the ability to develop biofilms. By DNA microarray analysis, 25 genes were differentially regulated in S. gordonii ∆arcR compared with wild-type under arginine-replete conditions including eight genes encoding components of phosphotransferase systems for sugar uptake. By contrast, disruption of argR or ahrC genes, which encode paralogous arginine-dependent regulators, each resulted in significant changes in the expression of more than 100 genes. Disruption of a gene encoding a putative extracellular protein that was strongly regulated in S. gordonii ∆arcR had a minor impact on biofilm formation. We hypothesize that genes regulated by ArcR form a critical pathway linking arginine sensing to biofilm formation in S. gordonii. Further elucidation of this pathway may provide new targets for the control of dental plaque formation by inhibiting biofilm formation by a key pioneer colonizer of tooth surfaces.


Subject(s)
Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Biofilms/growth & development , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Dental Plaque/microbiology , Streptococcus gordonii/genetics , Streptococcus gordonii/metabolism , Arginine/metabolism , DNA, Bacterial/genetics , Gene Expression Profiling , Gene Expression Regulation, Bacterial , Gene Knockout Techniques , Genes, Bacterial/genetics , Phosphotransferases/genetics , Phosphotransferases/metabolism , Regulon/genetics , Repressor Proteins/genetics , Repressor Proteins/metabolism , Trans-Activators/genetics
3.
J Dent Res ; 96(2): 208-216, 2017 02.
Article in English | MEDLINE | ID: mdl-27770039

ABSTRACT

Extracellular DNA (eDNA) has been identified in the matrix of many different monospecies biofilms in vitro, including some of those produced by oral bacteria. In many cases, eDNA stabilizes the structure of monospecies biofilms. Here, the authors aimed to determine whether eDNA is an important component of natural, mixed-species oral biofilms, such as plaque on natural teeth or dental implants. To visualize eDNA in oral biofilms, approaches for fluorescently stained eDNA with either anti-DNA antibodies or an ultrasensitive cell-impermeant dye, YOYO-1, were first developed using Enterococcus faecalis, an organism that has previously been shown to produce extensive eDNA structures within biofilms. Oral biofilms were modelled as in vitro "microcosms" on glass coverslips inoculated with the natural microbial population of human saliva and cultured statically in artificial saliva medium. Using antibodies and YOYO-1, eDNA was found to be distributed throughout microcosm biofilms, and was particularly abundant in the immediate vicinity of cells. Similar arrangements of eDNA were detected in biofilms on crowns and overdenture abutments of dental implants that had been recovered from patients during the restorative phase of treatment, and in subgingival dental plaque of periodontitis patients, indicating that eDNA is a common component of natural oral biofilms. In model oral biofilms, treatment with a DNA-degrading enzyme, NucB from Bacillus licheniformis, strongly inhibited the accumulation of biofilms. The bacterial species diversity was significantly reduced by treatment with NucB and particularly strong reductions were observed in the abundance of anaerobic, proteolytic bacteria such as Peptostreptococcus, Porphyromonas and Prevotella. Preformed biofilms were not significantly reduced by NucB treatment, indicating that eDNA is more important or more exposed during the early stages of biofilm formation. Overall, these data demonstrate that dental plaque eDNA is potentially an important target for oral biofilm control.


Subject(s)
DNA, Bacterial/physiology , Dental Plaque/etiology , Biofilms/growth & development , Dental Implants/microbiology , Dental Plaque/microbiology , Dental Plaque/ultrastructure , Enterococcus faecalis/genetics , Enterococcus faecalis/metabolism , Humans , Microscopy, Electron, Scanning , Saliva/metabolism
4.
J Appl Microbiol ; 122(3): 796-808, 2017 Mar.
Article in English | MEDLINE | ID: mdl-27981713

ABSTRACT

AIMS: Saliva has been previously used as an inoculum for in vitro oral biofilm studies. However, the microbial community profile of saliva is markedly different from hard- and soft-tissue-associated oral biofilms. Here, we investigated the changes in the biofilm architecture and microbial diversity of in vitro oral biofilms developed from saliva, tongue or plaque-derived inocula under different salivary shear forces. METHODS AND RESULTS: Four inoculum types (saliva, bacteria harvested from the tongue, toothbrush and curette-harvested plaque) were collected and pooled. Biofilms (n ≥ 15) were grown for 20 h in cell-free human saliva flowing at three different shear forces. Stained biofilms were imaged using a confocal laser scanning microscope. Biomass, thickness and roughness were determined by image analysis and bacterial community composition analysed using Ion Torrent. All developed biofilms showed a significant reduction in observed diversity compared with their respective original inoculum. Shear force altered biofilm architecture of saliva and curette-collected plaque and community composition of saliva, tongue and curette-harvested plaque. CONCLUSIONS: Different intraoral inocula served as precursors of in vitro oral polymicrobial biofilms which can be influenced by shear. SIGNIFICANCE AND IMPACT OF THE STUDY: Inoculum selection and shear force are key factors to consider when developing multispecies biofilms within in vitro models.


Subject(s)
Biofilms/growth & development , Dental Plaque/microbiology , Mouth/microbiology , Saliva/microbiology , Tongue/microbiology , Bacteria/growth & development , Bacteria/ultrastructure , Biomechanical Phenomena , Humans , Microscopy, Confocal , Shear Strength
5.
Lett Appl Microbiol ; 63(4): 233-9, 2016 Oct.
Article in English | MEDLINE | ID: mdl-27479925

ABSTRACT

UNLABELLED: The human opportunistic pathogen, Acinetobacter baumannii, has the propensity to form biofilms and frequently cause medical device-related infections in hospitals. However, the physio-chemical properties of medical surfaces, in addition to bacterial surface properties, will affect colonization and biofilm development. The objective of this study was to compare the ability of A. baumannii to form biofilms on six different materials common to the hospital environment: glass, porcelain, stainless steel, rubber, polycarbonate plastic and polypropylene plastic. Biofilms were developed on material coupons in a CDC biofilm reactor. Biofilms were visualized and quantified using fluorescent staining and imaged using confocal laser scanning microscopy (CLSM) and by direct viable cell counts. Image analysis of CLSM stacks indicated that the mean biomass values for biofilms grown on glass, rubber, porcelain, polypropylene, stainless steel and polycarbonate were 0·04, 0·26, 0·62, 1·00, 2·08 and 2·70 µm(3) /µm(2) respectively. Polycarbonate developed statistically more biofilm mass than glass, rubber, porcelain and polypropylene. Viable cell counts data were in agreement with the CLSM-derived data. In conclusion, polycarbonate was the most accommodating surface for A. baumannii ATCC 17978 to form biofilms while glass was least favourable. Alternatives to polycarbonate for use in medical and dental devices may need to be considered. SIGNIFICANCE AND IMPACT OF THE STUDY: In the hospital environment, Acinetobacter baumannii is one of the most persistent and difficult to control opportunistic pathogens. The persistence of A. baumannii is due, in part, to its ability to colonize surfaces and form biofilms. This study demonstrates that A. baumannii can form biofilms on a variety of different surfaces and develops substantial biofilms on polycarbonate - a thermoplastic material that is often used in the construction of medical devices. The findings highlight the need to further study the in vitro compatibility of medical materials that could be colonized by A. baumannii and allow it to persist in hospital settings.


Subject(s)
Acinetobacter Infections/microbiology , Acinetobacter baumannii/growth & development , Acinetobacter baumannii/metabolism , Biofilms/growth & development , Equipment and Supplies/microbiology , Opportunistic Infections/microbiology , Ceramics , Colony Count, Microbial , Glass , Hospitals , Humans , Microscopy, Confocal , Polymers , Polypropylenes , Rubber , Stainless Steel , Surface Properties
6.
Lett Appl Microbiol ; 63(4): 274-81, 2016 Oct.
Article in English | MEDLINE | ID: mdl-27455031

ABSTRACT

UNLABELLED: This paper describes a high-throughput method that relies upon a microplate reader to score coaggregation 60 min postmixing, and use of a high-speed real-time imaging technology to describe the rate of coaggregation over time. The results of visual, microplate, and FlowCam(™) aggregation scores for oral bacteria Streptococcus gordonii, Streptococcus oralis, and Actinomyces oris, whose ability to coaggregate are well characterized, are compared. Following mixing of all possible pairs, the top fraction of the supernatant was added to a microplate to quantify cell-density. Pairs were also passed through a flow cell within a FlowCam(™) to quantify the rate of coaggregation of each pair. Results from both the microplate and FlowCam(™) approaches correlated with corresponding visual coaggregation scores and microscopic observations. The microplate-based assay enables high-throughput screening, whereas the FlowCam(™) -based assay validates and quantifies the extent that autoaggregation and coaggregation occur. Together these assays open the door for future in-depth studies of autoaggregation and coaggregation among large panels of test strains. SIGNIFICANCE AND IMPACT OF THE STUDY: Coaggregation between bacterial species is integral to multi-species biofilm development. Difficulties in rapidly and reproducibly identifying and quantifying coaggregation have limited mechanistic studies. This paper demonstrates two complementary quantitative methods to screen for coaggregation. The first approach uses a microplate-based high-throughput approach and the other uses a FlowCam(™) device. The microplate-based approach enables rapid detection of coaggregation between candidate coaggregating pairs of strains simultaneously while controlling for variation between replicates. The FlowCam(™) approach allows for in-depth analysis of the rates of coaggregation and size of aggregates formed.


Subject(s)
Actinomyces/physiology , Bacterial Adhesion/physiology , Biofilms/growth & development , Mouth/microbiology , Streptococcus/physiology , Actinomyces/growth & development , High-Throughput Screening Assays/methods , Microscopy, Confocal , Streptococcus/growth & development
7.
J Appl Microbiol ; 120(6): 1449-65, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26678028

ABSTRACT

Nisin is a bacteriocin produced by a group of Gram-positive bacteria that belongs to Lactococcus and Streptococcus species. Nisin is classified as a Type A (I) lantibiotic that is synthesized from mRNA and the translated peptide contains several unusual amino acids due to post-translational modifications. Over the past few decades, nisin has been used widely as a food biopreservative. Since then, many natural and genetically modified variants of nisin have been identified and studied for their unique antimicrobial properties. Nisin is FDA approved and generally regarded as a safe peptide with recognized potential for clinical use. Over the past two decades the application of nisin has been extended to biomedical fields. Studies have reported that nisin can prevent the growth of drug-resistant bacterial strains, such as methicillin-resistant Staphylococcus aureus, Streptococcus pneumoniae, Enterococci and Clostridium difficile. Nisin has now been shown to have antimicrobial activity against both Gram-positive and Gram-negative disease-associated pathogens. Nisin has been reported to have anti-biofilm properties and can work synergistically in combination with conventional therapeutic drugs. In addition, like host-defence peptides, nisin may activate the adaptive immune response and have an immunomodulatory role. Increasing evidence indicates that nisin can influence the growth of tumours and exhibit selective cytotoxicity towards cancer cells. Collectively, the application of nisin has advanced beyond its role as a food biopreservative. Thus, this review will describe and compare studies on nisin and provide insight into its future biomedical applications.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Bacteriocins/administration & dosage , Gram-Positive Bacteria/metabolism , Nisin/administration & dosage , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Antineoplastic Agents/administration & dosage , Bacterial Infections/drug therapy , Bacterial Infections/microbiology , Bacterial Infections/prevention & control , Bacteriocins/chemistry , Bacteriocins/pharmacology , Biofilms/drug effects , Drug Resistance, Bacterial , Nisin/chemistry , Nisin/genetics , Nisin/pharmacology , Preservation, Biological , Virus Diseases/drug therapy , Virus Diseases/prevention & control
8.
Biofouling ; 30(10): 1235-51, 2014.
Article in English | MEDLINE | ID: mdl-25421394

ABSTRACT

Coaggregation is the specific recognition and adherence of genetically distinct microorganisms. Because most biofilms are polymicrobial communities, there is potential for coaggregation to play an integral role in spatiotemporal biofilm development and the moderation of biofilm community composition. However, understanding of the mechanisms contributing to coaggregation and the relevance of coaggregation to biofilm ecology is at a very early stage. The purpose of this review is to highlight recent advances in the understanding of microbial coaggregation within different environments and to describe the possible ecological ramifications of such interactions. Bacteria that coaggregate with many partner species within different environments will be highlighted, including oral streptococci and oral bridging organisms such as fusobacteria, as well as the freshwater sphingomonads and acinetobacters. Irrespective of environment, it is proposed that coaggregation is essential for the orchestrated development of multi-species biofilms.


Subject(s)
Bacterial Adhesion , Biofilms/growth & development , Microbial Consortia , Bacteria/growth & development , Fresh Water/microbiology , Mouth/microbiology
9.
J Appl Microbiol ; 117(5): 1472-86, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25081571

ABSTRACT

AIMS: To design and synthesize a library of structurally related, small molecules related to homologues of compounds produced by the plant Petiveria alliacea and determine their ability to interfere with AI-2 cell-cell communication and biofilm formation by oral bacteria. Many human diseases are associated with persistent bacterial biofilms. Oral biofilms (dental plaque) are problematic as they are often associated with tooth decay, periodontal disease and systemic disorders such as heart disease and diabetes. METHODS AND RESULTS: Using a microplate-based approach, a bio-inspired small molecule library was screened for anti-biofilm activity against the oral species Streptococcus mutans UA159, Streptococcus sanguis 10556 and Actinomyces oris MG1. To complement the static screen, a flow-based BioFlux microfluidic system screen was also performed under conditions representative of the human oral cavity. Several compounds were found to display biofilm inhibitory activity in all three of the oral bacteria tested. These compounds were also shown to inhibit bioluminescence by Vibrio harveyi and were thus inferred to be quorum sensing (QS) inhibitors. CONCLUSION: Due to the structural similarity of these compounds to each other, and to key molecules in AI-2 biosynthetic pathways, we propose that these molecules potentially reduce biofilm formation via antagonism of QS or QS-related pathways. SIGNIFICANCE AND IMPACT OF THE STUDY: This study highlights the potential for a non-antimicrobial-based strategy, focused on AI-2 cell-cell signalling, to control the development of dental plaque. Considering that many bacterial species use AI-2 cell-cell signalling, as well as the increased concern of the use of antimicrobials in healthcare products, such an anti-biofilm approach could also be used to control biofilms in environments beyond the human oral cavity.


Subject(s)
Anti-Bacterial Agents/pharmacology , Biofilms/drug effects , Quorum Sensing/drug effects , Sulfoxides/pharmacology , Actinomyces/drug effects , Anti-Bacterial Agents/chemistry , Bacteria/drug effects , Bacteria/metabolism , Cysteine , Dental Plaque/microbiology , Humans , Streptococcus mutans/genetics , Streptococcus mutans/physiology , Streptococcus sanguis/drug effects , Sulfur Compounds/pharmacology , Transcription, Genetic/drug effects , Vibrio/drug effects , Vibrio/metabolism
10.
Biofouling ; 26(8): 931-40, 2010 Nov.
Article in English | MEDLINE | ID: mdl-21058055

ABSTRACT

The aim of this study was to explore the physicochemical parameters that influence coaggregation between the freshwater bacteria Sphingomonas natatoria 2.1 and Micrococcus luteus 2.13. Using visual coaggregation assays, the effect of different buffers, solutions of differing ionic strength, pH, temperature, and viscosity on the degree of coaggregation was assessed. Coaggregation occurred maximally in distilled water but was inhibited when coaggregates were suspended in a commonly-used oral bacterial coaggregation buffer, saline solutions, and Tris-Cl buffers. Coaggregation was weakly expressed in standard laboratory buffers. The ionic strength of inorganic salt solutions required to inhibit coaggregation depended upon the inorganic salt being tested. Coaggregation occurred at a pH of 3-10, between 5 and 80°C and was inhibited in solutions with a viscosity of 22.5 centipoises at 20°C. Inhibition of coaggregation with NaCl impaired biofilm development. When developing buffers to test for coaggregation, the natural liquid environment should be considered. Coaggregation between S. natatoria 2.1 and M. luteus 2.13 is only affected by physicochemical conditions beyond those typically found in natural freshwater ecosystems. Such a robust ability to coaggregate may enhance the ability of S. natatoria 2.1 and M. luteus 2.13 to develop a niche in freshwater biofilms.


Subject(s)
Biofilms , Fresh Water/microbiology , Micrococcus luteus , Sphingomonas , Animals , Bacterial Adhesion/drug effects , Bacterial Adhesion/physiology , Biofilms/drug effects , Biofilms/growth & development , Biomedical and Dental Materials/chemistry , Biomedical and Dental Materials/pharmacology , Buffers , Dental Plaque/microbiology , Dental Plaque/prevention & control , Ecosystem , Edetic Acid/chemistry , Edetic Acid/pharmacology , Hydrogen-Ion Concentration , Microbial Interactions/drug effects , Microbial Interactions/physiology , Micrococcus luteus/drug effects , Micrococcus luteus/physiology , Microscopy, Confocal , Osmolar Concentration , Salts/chemistry , Salts/pharmacology , Sodium Chloride/chemistry , Sodium Chloride/pharmacology , Sphingomonas/drug effects , Sphingomonas/physiology , Temperature , Tromethamine/chemistry , Tromethamine/pharmacology , Viscosity
11.
J Appl Microbiol ; 108(5): 1509-22, 2010 May.
Article in English | MEDLINE | ID: mdl-19840177

ABSTRACT

AIM: To (i) identify chronic wound bacteria and to test their ability to produce acyl-homoserine-lactones (AHLs) and autoinducer-2 (AI-2) cell-cell signalling molecules and (ii) determine whether chronic wound debridement samples might contain these molecules. METHODS AND RESULTS: Partial 16S rRNA gene sequencing revealed the identity of 46 chronic wound strains belonging to nine genera. Using bio-reporter assays, 69.6% of the chronic wound strains were inferred to produce AI-2, while 19.6% were inferred to produce AHL molecules. At least one strain from every genus, except those belonging to the genera Acinetobacter and Pseudomonas, were indicated to produce AI-2. Production of AI-2 in batch cultures was growth-phase dependent. Cross-feeding assays demonstrated that AHLs were produced by Acinetobacter spp., Pseudomonas aeruginosa and Serratia marcescens. Independent from studies of the bacterial species isolated from wounds, AHL and/or AI-2 signalling molecules were detected in 21 of 30 debridement samples of unknown microbial composition. CONCLUSION: Chronic wound bacteria produce cell-cell signalling molecules. Based on our findings, we hypothesize that resident species generally produce AI-2 molecules, and aggressive transient species associated with chronic wounds typically produce AHLs. Both these classes of cell-cell signals are indicated to be present in human chronic wounds. SIGNIFICANCE AND IMPACT OF THE STUDY: Interbacterial cell-cell signalling may be an important factor influencing wound development and if this is the case, the presence of AHLs and AI-2 could be used as a predictor of wound severity. Manipulation of cell-cell signalling may provide a novel strategy for improving wound healing.


Subject(s)
Acyl-Butyrolactones/metabolism , Bacteria/genetics , Homoserine/analogs & derivatives , Signal Transduction , Bacteria/classification , Bacterial Infections/microbiology , Gene Expression Regulation, Bacterial , Homoserine/genetics , Homoserine/metabolism , Humans , Lactones/metabolism , Phylogeny , RNA, Ribosomal, 16S/genetics
12.
Appl Environ Microbiol ; 75(12): 3987-97, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19376917

ABSTRACT

Coaggregation is hypothesized to enhance freshwater biofilm development. To investigate this hypothesis, the ability of the coaggregating bacterium Sphingomonas natatoria to form single- and dual-species biofilms was studied and compared to that of a naturally occurring spontaneous coaggregation-deficient variant. Attachment assays using metabolically inactive cells were performed using epifluorescence and confocal laser scanning microscopy. Under static and flowing conditions, coaggregating S. natatoria 2.1gfp cells adhered to glass surfaces to form diaphanous single-species biofilms. When glass surfaces were precoated with coaggregation partner Micrococcus luteus 2.13 cells, S. natatoria 2.1gfp cells formed densely packed dual-species biofilms. The addition of 80 mM galactosamine, which reverses coaggregation, mildly reduced adhesion to glass but inhibited the interaction and attachment to glass-surface-attached M. luteus 2.13 cells. As opposed to wild-type coaggregating cells, coaggregation-deficient S. natatoria 2.1COGgfp variant cells were retarded in colonizing glass and did not interact with glass-surface-attached M. luteus 2.13 cells. To determine if coaggregation enhances biofilm growth and expansion, viable coaggregating S. natatoria 2.1gfp cells or the coaggregation-deficient variant S. natatoria 2.1COGgfp cells were coinoculated in flow cells with viable M. luteus 2.13 cells and allowed to grow together for 96 h. Coaggregating S. natatoria 2.1gfp cells outcompeted M. luteus 2.13 cells, and 96-h biofilms were composed predominantly of S. natatoria 2.1gfp cells. Conversely, when coaggregation-deficient S. natatoria 2.1COGgfp cells were coinoculated with M. luteus 2.13 cells, the 96-h biofilm contained few coaggregation-deficient S. natatoria 2.1 cells. Thus, coaggregation promotes biofilm integration by facilitating attachment to partner species and likely contributes to the expansion of coaggregating S. natatoria 2.1 populations in dual-species biofilms through competitive interactions.


Subject(s)
Bacterial Adhesion , Biofilms/growth & development , Fresh Water/microbiology , Micrococcus luteus/physiology , Sphingomonas/physiology , Glass , Microscopy, Confocal , Staining and Labeling
13.
J Appl Microbiol ; 105(6): 2096-103, 2008 Dec.
Article in English | MEDLINE | ID: mdl-19120655

ABSTRACT

AIMS: We evaluated the ability of a dual-species community of oral bacteria to produce the universal signalling molecule, autoinducer-2 (AI-2), in saliva-fed biofilms. METHODS AND RESULTS: Streptococcus oralis 34, S. oralis 34 luxS mutant and Actinomyces naeslundii T14V were grown as single- and dual-species biofilms within sorbarods fed with 25% human saliva. AI-2 concentration in biofilm effluents was determined by the Vibrio harveyi BB170 bioluminescence assay. After homogenizing the sorbarods to release biofilm cells, cell numbers were determined by fluorometric analysis of fluorescent antibody-labelled cells. After 48 h, dual-species biofilm communities of interdigitated S. oralis 34 and A. naeslundii T14V contained 3.2 x 10(9) cells: fivefold more than single-species biofilms. However, these 48-h dual-species biofilms exhibited the lowest concentration ratio of AI-2 to cell density. CONCLUSIONS: Oral bacteria produce AI-2 in saliva-fed biofilms. The decrease of more than 10-fold in concentration ratio seen between 1 and 48 h in S. oralis 34-A. naeslundii T14V biofilms suggests that peak production of AI-2 occurs early and is followed by a very low steady-state level. SIGNIFICANCE AND IMPACT OF THE STUDY: High oral bacterial biofilm densities may be achieved by inter-species AI-2 signalling. We propose that low concentrations of AI-2 contribute to the establishment of oral commensal biofilm communities.


Subject(s)
Actinomyces/metabolism , Biofilms/growth & development , Homoserine/analogs & derivatives , Lactones/metabolism , Streptococcus oralis/metabolism , Actinomyces/growth & development , Adult , Colony Count, Microbial/methods , Fluorometry , Glass , Homoserine/metabolism , Humans , Saliva/microbiology , Streptococcus oralis/growth & development
14.
Int J Syst Evol Microbiol ; 55(Pt 2): 821-829, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15774669

ABSTRACT

A Gram-negative bacterium was isolated from a freshwater biofilm developed on a stainless steel surface under a fluid velocity of 0.26 m s(-1). The strain, MBRG1.5(T), was cultivated on R2A agar and formed pink colonies. Light microscopy and negative staining in a transmission electron microscope showed that the cells were rod-shaped, approximately 2.8-4.1 microm long by 0.9-1.7 microm wide in size and produced large quantities of extracellular fibrillar material. Additionally, following growth in batch culture, transmission electron microscopy showed that many cells plasmolysed. Stationary-phase cells were more variable in size and shape. The DNA G+C content was 40.0 mol%. The most abundant fatty acids were 15 : 0 iso (22.5 %), followed by 16 : 1omega5c (16.9 %) and 15 : 0 iso 2-OH (16.5 %). Phylogenetic analysis of the 16S rRNA gene showed that the strain was a member of the family 'Flexibacteraceae' of the Cytophaga-Flavobacterium-Bacteroides group. Phenotypic and genotypic analyses indicated that the strain could not be assigned to any recognized genus; therefore a novel genus and species, Adhaeribacter aquaticus gen. nov., sp. nov., is proposed, with MBRG1.5(T) (=DSM 16391(T)=NCIMB 14008(T)) as the type strain.


Subject(s)
Biofilms/growth & development , Cytophagaceae/classification , Drinking , Fresh Water/microbiology , Base Composition , Cytophagaceae/genetics , Cytophagaceae/growth & development , Cytophagaceae/isolation & purification , DNA, Bacterial/analysis , DNA, Ribosomal/analysis , Fatty Acids/analysis , Genes, rRNA , Genotype , Molecular Sequence Data , Phenotype , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
15.
J Bacteriol ; 186(21): 7312-26, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15489443

ABSTRACT

The processes associated with early events in biofilm formation have become a major research focus over the past several years. Events associated with dispersion of cells from late stage biofilms have, however, received little attention. We demonstrate here that dispersal of Pseudomonas aeruginosa PAO1 from biofilms is inducible by a sudden increase in carbon substrate availability. Most efficient at inducing dispersal were sudden increases in availability of succinate > glutamate > glucose that led to approximately 80% reductions in surface-associated biofilm biomass. Nutrient-induced biofilm dispersion was associated with increased expression of flagella (fliC) and correspondingly decreased expression of pilus (pilA) genes in dispersed cells. Changes in gene expression associated with dispersion of P. aeruginosa biofilms were studied by using DNA microarray technology. Results corroborated proteomic data that showed gene expression to be markedly different between biofilms and newly dispersed cells. Gene families that were upregulated in dispersed cells included those for flagellar and ribosomal proteins, kinases, and phage PF1. Within the biofilm, genes encoding a number of denitrification pathways and pilus biosynthesis were also upregulated. Interestingly, nutrient-induced dispersion was associated with an increase in the number of Ser/Thr-phosphorylated proteins within the newly dispersed cells, and inhibition of dephosphorylation reduced the extent of nutrient-induced dispersion. This study is the first to demonstrate that dispersal of P. aeruginosa from biofilms can be induced by the addition of simple carbon sources. This study is also the first to demonstrate that dispersal of P. aeruginosa correlates with a specific dispersal phenotype.


Subject(s)
Bacterial Proteins/metabolism , Biofilms/growth & development , Carbon/metabolism , Gene Expression Regulation, Bacterial , Plankton/physiology , Pseudomonas aeruginosa/physiology , Bacterial Proteins/genetics , Culture Media , Gene Expression Profiling , Oligonucleotide Array Sequence Analysis , Plankton/growth & development , Proteome , Pseudomonas aeruginosa/genetics , Pseudomonas aeruginosa/growth & development
16.
J Appl Microbiol ; 97(5): 1063-8, 2004.
Article in English | MEDLINE | ID: mdl-15479423

ABSTRACT

AIM: To investigate the potential of non-antibacterial consumer products to act as inducers of the multiple antibiotic resistance (mar) operon of Escherichia coli SPC105. METHODS AND RESULTS: Wells were cut into chemically defined agar medium (CDM) contained within Petri dishes. Molten agar slurries were prepared by mixing known quantities of 35 consumer products with molten CDM and these were pipetted into each well. Plates were overlaid with molten CDM (5 ml), containing 40 microg ml(-1) X-gal and approx. 1000 CFU ml(-1) of an overnight culture of E. coli SPC105 containing a chromosomal marOII::lacZ fusion. After incubation (37 degrees C, 24 h), plates were examined for zones of growth inhibition and the presence of a blue coloration, indicative of mar (marOII::lacZ) induction. Of the 35 products tested (nine herbs and spices, 19 food and drinks and seven household products), 24 (69%) of the items produced inhibitory zones and 22 (63%) of the items induced mar expression. Apple puree was inhibitory but did not induce marOII::lacZ. Mustard, chilli and garlic were shown to be powerful inducers of marOII::lacZ. Overall six products were shown to be powerful marOII::lacZ inducers. None of these made hygiene claims. CONCLUSIONS: In addition to induction by specific biocides and antibiotics, mar is induced by the exposure of bacteria to natural substances, many of which are common to a domiciliary setting. SIGNIFICANCE AND IMPACT OF THE STUDY: Concern that the overuse of antibacterials within consumer products might select for mar-mediated resistance is shortsighted and fails to recognize the ubiquity of inducers in our environment.


Subject(s)
Drug Resistance, Multiple, Bacterial/genetics , Escherichia coli/genetics , Household Products/microbiology , Operon/genetics , Escherichia coli/drug effects , Escherichia coli/growth & development , Food Microbiology , Gene Expression Regulation, Bacterial/drug effects , Genes, Bacterial , Genes, MDR , Humans , Microbial Sensitivity Tests/methods , Spices/microbiology
17.
J Appl Microbiol ; 96(6): 1367-73, 2004.
Article in English | MEDLINE | ID: mdl-15139931

ABSTRACT

AIM: To characterize the expression of coaggregation between Blastomonas natatoria 2.1 and Micrococcus luteus 2.13 following growth in liquid culture, on agar and in an artificial biofilm matrix composed of poloxamer hydrogel. METHODS AND RESULTS: The ability of B. natatoria 2.1 and M. luteus 2.13 to coaggregate with one another was assessed following growth in liquid culture as colonies on agar or within a poloxamer hydrogel matrix. In all these environments a cycle of gain and loss of coaggregation occurred when the two cell types were aged simultaneously, with optimum expression occurring in early stationary phase. Blastomonas natatoria 2.1 cells only coaggregated maximally after entry into stationary phase. Conversely, M. luteus 2.13 cells only coaggregated in exponential phase and early stationary phase and coaggregation ability was lost in late stationary phase. Maximal coaggregation therefore only occurred between the two strains if both were in early stationary phase, when the surface properties of the two cell types were optimal for coaggregation. CONCLUSION: In addition to occurring between cells grown in liquid culture, coaggregation between aquatic bacteria occurs after growth as a biofilm on agar and in an artificial biofilm matrix in poloxamer. Under all conditions, the B. natatoria 2.1 coaggregation adhesin and complementary receptor on M. luteus 2.13 were only expressed simultaneously during early stationary phase.


Subject(s)
Biofilms , Fresh Water/microbiology , Gram-Negative Aerobic Bacteria/physiology , Micrococcus luteus/physiology , Water Microbiology , Agar , Bacterial Adhesion , Culture Media , Gram-Negative Aerobic Bacteria/growth & development , Micrococcus luteus/growth & development , Poloxamer
18.
FEMS Microbiol Lett ; 220(1): 133-40, 2003 Mar 14.
Article in English | MEDLINE | ID: mdl-12644239

ABSTRACT

The coaggregation ability of bacteria isolated from a freshwater biofilm was compared to those derived from the coexisting planktonic population. Twenty-nine morphologically distinct bacterial strains were isolated from a 6-month-old biofilm, established in a glass tank under high-shear conditions, and 15 distinct strains were isolated from the associated re-circulating water. All 44 strains were identified to genus or species level by 16S rDNA sequencing. The 29 biofilm strains belonged to 14 genera and 23.4% of all the possible pair-wise combinations coaggregated. The 15 planktonic strains belonged to seven genera and only 5.8% of all the possible pair-wise combinations coaggregated. Therefore, compared to the planktonic population, a greater proportion of the biofilm strains coaggregated. It is proposed that coaggregation influences biofilm formation and species diversity in freshwater under high shear.


Subject(s)
Bacteria/isolation & purification , Biofilms , Plankton/isolation & purification , Water Microbiology , Animals , Bacteria/drug effects , Bacterial Physiological Phenomena , Biofilms/drug effects , Biofilms/growth & development , Carbohydrates/pharmacology , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Fresh Water , Phylogeny , Plankton/drug effects , Plankton/physiology , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Rheology , Sequence Alignment , Sequence Homology, Nucleic Acid , Species Specificity
19.
J Ind Microbiol Biotechnol ; 29(6): 326-30, 2002 Dec.
Article in English | MEDLINE | ID: mdl-12483474

ABSTRACT

The lethality of biocides depends upon their interaction with a number of distinct biochemical targets. This often reflects reactive chemistry for any given agent, such as thiol oxidation. Susceptibility may vary markedly between different target organisms, and changes within the more sensitive targets can alter the inhibitory effect. The multiplicity of potential targets, however, usually dictates against the development of overt resistance to concentrations used for hygienic applications. Similarly, although changes in cellular permeability toward such agents, mediated either by envelope modification or the induction of efflux-pumps may reduce susceptibility, they rarely influence the outcome of treatments at use-concentration. It has recently been proposed that chronic exposure of the environment to biocides used in a variety of commercial products might expose some microbial communities to subeffective concentrations causing emergence of resistant clones. Such resistance might relate to mutational changes in the most susceptible target or to regulatory mutants that cause the constitutive expression of certain efflux pumps. Although selection of organisms with such modifications is unlikely to influence the effectiveness of the biocides, changes in their susceptibility to third-party antibiotics can be postulated. This is particularly the case where a cellular target is shared between a biocide and an antibiotic, or where induction of efflux is sufficient to confer antibiotic resistance in the clinic. Although such linkage has been demonstrated in the laboratory in pure culture, it has not been documented in environments commonly exposed to biocides. In nature, the effects of chronic stressing with biocides are complicated by competition between microbial community members that may result in clonal expansion of naturally insusceptible clones.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacteria/drug effects , Drug Resistance, Bacterial , Environmental Microbiology , Bacteria/genetics , Drug Resistance, Bacterial/genetics , Selection, Genetic
20.
J Appl Microbiol ; 93(2): 336-44, 2002.
Article in English | MEDLINE | ID: mdl-12147083

ABSTRACT

AIMS: To determine the susceptibility of planktonic and biofilm-grown strains of resident and transient skin bacteria to the liquid hand soap biocides para-chloro-meta-xylenol (PCMX) and triclosan. METHODS AND RESULTS: Freshly isolated hand bacteria were identified by partial 16S rRNA gene sequencing. Two resident and three transient strains, as well as four exogenous potential transient strains, were selected for biocide susceptibility testing. The minimum inhibitory concentrations (MIC) and minimum bactericidal concentrations (MBC) of planktonic cells were determined. Resident and transient strains showed a range of susceptibilities to both biocides (PCMX, MIC 12.5-200 mg x l(-1), MBC 100-400 mg x l(-1); triclosan, MIC 0.6- > 40 mg x l(-1), MBC 1.3- > 40 mg x l(-1)). Strains were attached to polystyrene plates for 65 h in 96-well microtitre plates and challenged with biocide to determine the biofilm inhibitory concentration and biofilm eradicating concentration. For all strains tested, biofilms were two- to eightfold less susceptible than planktonic cells to PCMX. CONCLUSIONS: Very few transients were detected on the hand. Transients were not more sensitive than residents to the biocides and susceptibility to PCMX and triclosan was strain dependent. Biofilm-grown strains were less susceptible to PCMX than planktonic cells. SIGNIFICANCE AND IMPACT OF THE STUDY: The study provides increased knowledge about the susceptibility of skin bacteria to biocides present in typical liquid antibacterial hand soaps and suggests that the concentration of biocide employed in such products is in excess of that required to kill the low numbers of transient bacteria typically found on skin.


Subject(s)
Anti-Infective Agents, Local/pharmacology , Gram-Negative Bacteria/drug effects , Hand/microbiology , Staphylococcus epidermidis/drug effects , Triclosan/pharmacology , Xylenes/pharmacology , Biofilms/growth & development , Drug Resistance, Bacterial , Humans , Microbial Sensitivity Tests , Polystyrenes , Soaps
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