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1.
J Inorg Biochem ; 252: 112458, 2024 03.
Article in English | MEDLINE | ID: mdl-38141432

ABSTRACT

A facile strategy is presented to enhance the accumulation of ferryl (iron(IV)-oxo) species in H2O2 dependent cytochrome P450s (CYPs) of the CYP152 family. We report the characterization of a highly chemoselective CYP decarboxylase from Staphylococcus aureus (OleTSA) that is soluble at high concentrations. Examination of OleTSA Compound I (CpdI) accumulation with a variety of fatty acid substrates reveals a dependence on resting spin-state equilibrium. Alteration of this equilibrium through targeted mutagenesis of the proximal pocket favors the high-spin form, and as a result, enhances Cpd-I accumulation to nearly stoichiometric yields.


Subject(s)
Cytochrome P-450 Enzyme System , Hydrogen Peroxide , Cytochrome P-450 Enzyme System/chemistry , Fatty Acids/chemistry
2.
Semin Diagn Pathol ; 40(4): 284-294, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37121782

ABSTRACT

Vascular neoplasms account for a substantial fraction of cutaneous mesenchymal tumors, spanning from clinically indolent benign lesions to highly aggressive malignancies. These neoplasms present a distinctive challenge in terms of their diagnostic histopathology, both because of the breadth of their morphological manifestations and because of the significant histological overlap between different entities, even benign and malignant ones. The post-radiotherapy setting is particularly problematic diagnostically, insofar as radiation exposure predisposes not only to secondary angiosarcoma, but also to atypical vascular lesion, a largely benign proliferation of cutaneous blood vessels typically affecting the breast. To address these challenges, we explore the clinical, histological, and molecular features of malignant vascular neoplasia, including primary and secondary subtypes, through the comparative lens of atypical vascular lesion. In addition to highlighting the key morphological indicators of malignancy in superficial vasoformative tumors, we offer an approach that integrates clinical characteristics and molecular genetic profiling to facilitate accurate classification. With this current knowledge as our foundation, we also look ahead in an effort to frame some of the key unanswered questions regarding superficial vascular malignancies and their natural history, clinical management, and molecular underpinnings.


Subject(s)
Breast Neoplasms , Hemangiosarcoma , Neoplasms, Radiation-Induced , Skin Neoplasms , Vascular Neoplasms , Humans , Female , Hemangiosarcoma/diagnosis , Hemangiosarcoma/genetics , Vascular Neoplasms/diagnosis , Vascular Neoplasms/complications , Vascular Neoplasms/pathology , Neoplasms, Radiation-Induced/diagnosis , Neoplasms, Radiation-Induced/genetics , Neoplasms, Radiation-Induced/complications , Skin Neoplasms/diagnosis , Skin Neoplasms/genetics , Breast/pathology , Breast Neoplasms/pathology
3.
Histopathology ; 83(1): 49-56, 2023 Jul.
Article in English | MEDLINE | ID: mdl-36860202

ABSTRACT

AIMS: Rhabdomyosarcomas currently are classified into one of four subtypes (alveolar, embryonal, spindle cell/sclerosing, or pleomorphic) according to their morphological, immunohistochemical, and molecular genetic features. The alveolar subtype is characterised by a recurrent translocation involving PAX3 or PAX7 and FOXO1; identification of this translocation is important for appropriate classification and prognostication. In this study, we aimed to explore the diagnostic utility of FOXO1 immunohistochemistry for rhabdomyosarcoma classification. METHODS/RESULTS: A monoclonal antibody targeting a FOXO1 epitope retained in the fusion oncoprotein was used to study 105 rhabdomyosarcomas. FOXO1 was positive for expression by immunohistochemistry in all 25 alveolar rhabdomyosarcomas, with 84% showing diffuse expression in greater than 90% of neoplastic cells; the remainder of alveolar rhabdomyosarcomas displayed at least moderate staining in a minimum of 60% of lesional cells. Apart from three spindle cell rhabdomyosarcomas showing heterogeneous nuclear immunoreactivity in 40-80% of tumour cells, the 80 cases of embryonal, pleomorphic, and spindle cell/sclerosing rhabdomyosarcoma were negative for FOXO1 expression (96.3% specific) when using a threshold of nuclear staining in 20% of neoplastic cells to determine positivity. Variable cytoplasmic staining was present in a fraction of all rhabdomyosarcoma subtypes. Nonneoplastic lymphocytes, endothelial cells, and Schwann cells also showed variably intense nuclear anti-FOXO1 immunoreactivity. CONCLUSION: Taken together, our findings suggest that FOXO1 immunohistochemistry is a highly sensitive and relatively specific surrogate marker of the PAX3/7::FOXO1 fusion oncoprotein in rhabdomyosarcoma. Cytoplasmic immunoreactivity, expression in nonneoplastic tissues, and limited nuclear staining of nonalveolar rhabdomyosarcomas represent potential pitfalls in interpretation.


Subject(s)
Rhabdomyosarcoma, Alveolar , Rhabdomyosarcoma , Child , Humans , Adult , Rhabdomyosarcoma, Alveolar/pathology , Immunohistochemistry , Endothelial Cells/metabolism , Rhabdomyosarcoma/pathology , Oncogene Proteins , Oncogene Proteins, Fusion/genetics
4.
Biochemistry ; 57(3): 344-353, 2018 01 23.
Article in English | MEDLINE | ID: mdl-29227633

ABSTRACT

Cytochrome P450 OleT utilizes hydrogen peroxide (H2O2) to catalyze the decarboxylation or hydroxylation of fatty acid (FA) substrates. Both reactions are initiated through the abstraction of a substrate hydrogen atom by the high-valent iron-oxo intermediate known as Compound I. Here, we specifically probe the influence of substrate coordination on OleT reaction partitioning through the combined use of fluorescent and electron paramagnetic resonance (EPR)-active FA probes and mutagenesis of a structurally disordered F-G loop that is distal from the heme-iron active site. Both probes are efficiently metabolized by OleT and efficiently trigger the formation of Compound I. Transient fluorescence and EPR reveal a slow product release step, mediated by the F-G loop, that limits OleT turnover. A single-amino acid change or excision of the loop reveals that this region establishes critical interactions to anchor FA substrates in place. The stabilization afforded by the F-G loop is essential for regulating regiospecific C-H abstraction and allowing for efficient decarboxylation to occur. These results highlight a regulatory strategy whereby the fate of activated oxygen species can be controlled at distances far removed from the site of chemistry.


Subject(s)
Carboxy-Lyases/metabolism , Cytochrome P-450 Enzyme System/metabolism , Base Sequence , Carboxy-Lyases/chemistry , Carboxy-Lyases/genetics , Cytochrome P-450 Enzyme System/chemistry , Cytochrome P-450 Enzyme System/genetics , Decarboxylation , Electron Spin Resonance Spectroscopy , Fatty Acids/metabolism , Fluorescence Resonance Energy Transfer , Fluorescent Dyes , Hydrogen Peroxide/metabolism , Hydroxylation , Mutagenesis, Site-Directed , Protein Conformation , Spectrophotometry, Ultraviolet , Substrate Specificity
5.
Biochemistry ; 56(26): 3347-3357, 2017 07 05.
Article in English | MEDLINE | ID: mdl-28603981

ABSTRACT

OleT is a cytochrome P450 enzyme that catalyzes the removal of carbon dioxide from variable chain length fatty acids to form 1-alkenes. In this work, we examine the binding and metabolic profile of OleT with shorter chain length (n ≤ 12) fatty acids that can form liquid transportation fuels. Transient kinetics and product analyses confirm that OleT capably activates hydrogen peroxide with shorter substrates to form the high-valent intermediate Compound I and largely performs C-C bond scission. However, the enzyme also produces fatty alcohol side products using the high-valent iron oxo chemistry commonly associated with insertion of oxygen into hydrocarbons. When presented with a short chain fatty acid that can initiate the formation of Compound I, OleT oxidizes the diagnostic probe molecules norcarane and methylcyclopropane in a manner that is reminiscent of reactions of many CYP hydroxylases with radical clock substrates. These data are consistent with a decarboxylation mechanism in which Compound I abstracts a substrate hydrogen atom in the initial step. Positioning of the incipient substrate radical is a crucial element in controlling the efficiency of activated OH rebound.


Subject(s)
Bacterial Proteins/metabolism , Caproates/metabolism , Caprylates/metabolism , Cytochrome P-450 Enzyme System/metabolism , Decanoic Acids/metabolism , Lauric Acids/metabolism , Micrococcus/enzymology , Models, Molecular , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Biocatalysis , Biofuels/analysis , Caprylates/chemistry , Carboxy-Lyases/chemistry , Carboxy-Lyases/genetics , Carboxy-Lyases/metabolism , Catalytic Domain , Cyclopropanes/chemistry , Cyclopropanes/metabolism , Cytochrome P-450 Enzyme System/chemistry , Cytochrome P-450 Enzyme System/genetics , Decanoic Acids/chemistry , Decarboxylation , Guaiacol/metabolism , Hydrogen Peroxide/chemistry , Hydrogen Peroxide/metabolism , Lauric Acids/chemistry , Molecular Conformation , Oxidation-Reduction , Substrate Specificity , Terpenes/chemistry , Terpenes/metabolism
6.
J Inorg Biochem ; 158: 11-16, 2016 05.
Article in English | MEDLINE | ID: mdl-26965726

ABSTRACT

Intensive interest has focused on enzymes that are capable of synthesizing hydrocarbons, alkenes and alkanes, for sustainable fuel production. A recently described cytochrome P450 (OleTJE) from the CYP152 family catalyzes an unusual carbon-carbon scission reaction, transforming Cn fatty acids to Cn-1 1-alkenes. Here, we show that a second CYP152, CYP-MP from Methylobacterium populi ATCC BAA 705, also catalyzes oxidative substrate decarboxylation. Alkene production is accompanied with the production of fatty alcohol products, underscoring the mechanistic similarity of the decarboxylation reaction with canonical P450 monooxygenation chemistry. The branchpoint of these two chemistries, and regiospecificity of oxidation products, is strongly chain length dependent, suggesting an importance of substrate coordination for regulating alkene production.


Subject(s)
Alkenes/chemistry , Alkenes/metabolism , Cytochrome P-450 Enzyme System/metabolism , Methylobacterium/enzymology , Peroxidases/metabolism , Oxidation-Reduction , Stereoisomerism
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