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1.
Sci Total Environ ; 920: 171020, 2024 Apr 10.
Article in English | MEDLINE | ID: mdl-38369133

ABSTRACT

The increasing prevalence of paraben compounds in the environment has given rise to concerns regarding their detrimental impacts on both ecosystems and human health. Over the past few decades, photocatalytic reactions have drawn significant attention as a method to accelerate the otherwise slow degradation of these pollutants. The current study aims to evaluate the current efficacy of the photocatalytic method for degrading parabens in aqueous solutions. An extensive literature review and bibliometric analysis were conducted to identify key research trends and influential areas in the field of photocatalytic paraben degradation. Studies were screened based on the predetermined inclusion and exclusion criteria, which led to 13 studies that were identified as being appropriate for the meta-analysis using the random effects model. Furthermore, experimental parameters such as pH, paraben initial concentration, catalyst dosage, light intensity, and contact time have been reported to have key impacts on the performance of the photocatalytic degradation process. A comprehensive quantitative assessment of these parameters was carried out in this work. Overall, photocatalytic techniques could eliminate parabens with an average degradation efficiency of >80 %. The findings of the Egger's test and the Begg's test were statistically not significant suggesting potential publication bias was not observed. This review provides a holistic understanding of the photocatalytic degradation of parabens and is anticipated to encourage more widespread adoption of photocatalytic procedures as a suitable method for the elimination of parabens from aqueous solutions, opening new avenues for future research in this direction.


Subject(s)
Environmental Pollutants , Environmental Restoration and Remediation , Humans , Parabens/metabolism , Ecosystem , Light
2.
Bioconjug Chem ; 35(2): 223-231, 2024 02 21.
Article in English | MEDLINE | ID: mdl-38215010

ABSTRACT

Membrane protein structures are essential for the molecular understanding of diverse cellular processes and drug discovery. Detergents are not only widely used to extract membrane proteins from membranes but also utilized to preserve native protein structures in aqueous solution. However, micelles formed by conventional detergents are suboptimal for membrane protein stabilization, necessitating the development of novel amphiphilic molecules with enhanced protein stabilization efficacy. In this study, we prepared two sets of tandem malonate-derived glucoside (TMG) variants, both of which were designed to increase the alkyl chain density in micelle interiors. The alkyl chain density was modulated either by reducing the spacer length (TMG-Ms) or by introducing an additional alkyl chain between the two alkyl chains of the original TMGs (TMG-Ps). When evaluated with a few membrane proteins including a G protein-coupled receptor, TMG-P10,8 was found to be substantially more efficient at extracting membrane proteins and also effective at preserving protein integrity in the long term compared to the previously described TMG-A13. This result reveals that inserting an additional alkyl chain between the two existing alkyl chains is an effective way to optimize detergent properties for membrane protein study. This new biochemical tool and the design principle described have the potential to facilitate membrane protein structure determination.


Subject(s)
Detergents , Membrane Proteins , Membrane Proteins/metabolism , Detergents/chemistry , Micelles
3.
J Environ Manage ; 319: 115675, 2022 Oct 01.
Article in English | MEDLINE | ID: mdl-35834856

ABSTRACT

Increasing demand of pure and accessible water and improper disposal of waste into the existing water resources are the major challenges for sustainable development. Nanoscale technology is an effective approach that is increasingly being applied to water remediation. Compared to conventional water treatment processes, silver nanotechnology has been demonstrated to have advantages due to its anti-microbial and oligodynamic (biocidal) properties. This review is focused on environmentally friendly green syntheses of silver nanoparticles (AgNPs) and their applications for the disinfection and microbial control of wastewater. A bibliometric keyword analysis is conducted to unveil important keywords and topics in the utilisation of AgNPs for water treatment applications. The effectiveness of AgNPs, as both free nanoparticles (NPs) or as supported NPs (nanocomposites), to deal with noxious pollutants like complex dyes, heavy metals as well as emerging pollutants of concern is also discussed. This knowledge dataset will be helpful for researchers to identify and utilise the distinctive features of AgNPs and will hopefully stimulate the development of novel solutions to improve wastewater treatment. This review will also help researchers to prepare effective water management strategies using nano silver-based systems manufactured using green chemistry.


Subject(s)
Environmental Pollutants , Metal Nanoparticles , Water Purification , Green Chemistry Technology , Metal Nanoparticles/chemistry , Nanotechnology , Silver
4.
Chemistry ; 28(21): e202200116, 2022 Apr 12.
Article in English | MEDLINE | ID: mdl-35238091

ABSTRACT

Membrane proteins are of biological and pharmaceutical significance. However, their structural study is extremely challenging mainly due to the fact that only a small number of chemical tools are suitable for stabilizing membrane proteins in solution. Detergents are widely used in membrane protein study, but conventional detergents are generally poor at stabilizing challenging membrane proteins such as G protein-coupled receptors and protein complexes. In the current study, we prepared tandem triazine-based maltosides (TZMs) with two amphiphilic triazine units connected by different diamine linkers, hydrazine (TZM-Hs) and 1,2-ethylenediamine (TZM-Es). These TZMs were consistently superior to a gold standard detergent (DDM) in terms of stabilizing a few membrane proteins. In addition, the TZM-Es containing a long linker showed more general protein stabilization efficacy with multiple membrane proteins than the TZM-Hs containing a short linker. This result indicates that introduction of the flexible1,2-ethylenediamine linker between two rigid triazine rings enables the TZM-Es to fold into favourable conformations in order to promote membrane protein stability. The novel concept of detergent foldability introduced in the current study has potential in rational detergent design and membrane protein applications.


Subject(s)
Detergents , Membrane Proteins , Detergents/chemistry , Hydrophobic and Hydrophilic Interactions , Membrane Proteins/chemistry , Protein Stability , Triazines
5.
Bioresour Technol ; 352: 127030, 2022 May.
Article in English | MEDLINE | ID: mdl-35314311

ABSTRACT

Sustainable and economical wastewater treatment forms a vital step towards long-term sustainability of petrochemical refineries and industries. An affordable solution to this challenge is to employ biowaste as the key consumable active component. This paper describes the synthesis and characterization of activated biochar derived from cow-dung, a readily available raw material in low-resource settings, and its application for adsorption of phenol, one of the major pollutants in industrial wastewater. Adsorption parameters are optimized by using response surface methodology. Phenol adsorption equilibrium and kinetics data are well fitted to Freundlich isotherm (R2 = 0.97) and pseudo-second-order model (R2 = 0.99), respectively. The maximal adsorption capacity (518.89 mg/g) was attained using the Langmuir isotherm model at pH 6.0. Negative values of thermodynamic parameters confirmed the spontaneity, feasibility, and exothermic behaviour of adsorption reaction. The results demonstrate that synthesized activated biochar showed an excellent phenol adsorption capacity of 98.8 %.


Subject(s)
Phenol , Water Pollutants, Chemical , Adsorption , Animals , Cattle , Charcoal/chemistry , Female , Hydrogen-Ion Concentration , Kinetics , Phenol/chemistry , Phenols/analysis , Thermodynamics , Water Pollutants, Chemical/analysis
6.
Environ Technol ; 43(24): 3670-3681, 2022 Oct.
Article in English | MEDLINE | ID: mdl-33998978

ABSTRACT

A tremendous increase in municipal solid waste (MSW) generation and its poor management is observed in almost all the developing countries. Landfilling, though undesirable, is an unavoidable disposal option with leachate generation and landfill gas (LFG) emissions as its major inescapable consequences. To evade these dismal outcomes of waste contentment, plant-soil based cover options are being studied widely. In the present study, an attempt was made to employ locally available plants for the phytoremediation of landfills. The experimental set-up was designed using 100 kg of MSW which was laid over with a thin soil layer of 30 cm. The efficiency of the laboratory-scale experimental set-up of 1 m3 volume was assessed in terms of trace element remediation and LFG oxidation. The initial and final parameters were finally assessed and compared. Plant species were found to develop a strong root zone, thereby reducing the infiltration of water into the waste mass. The present study showed a reduction in LFG emissions of 11.12%, 54.38%, and 32.12% in the deep zone, root zone, and topsoil zone, respectively. Furthermore, the study of the microbes, influencing soil chemical characteristics, could be helpful for designing an appropriate phytocover under diverse climatic conditions of India.


Subject(s)
Refuse Disposal , Trace Elements , Soil , Solid Waste/analysis , Waste Disposal Facilities , Water
7.
Bioresour Technol ; 344(Pt B): 126305, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34752892

ABSTRACT

Organic contaminants in water are a growing environmental threat to sustainable development, with detrimental effects on the biosphere. In recent years, researchers have increasingly focused their attention on the area of bioremediation as an important tool to eliminate harmful pollutants from the environment. This review examines the application of bioremediation technologies to the removal of organic pollutants, with an emphasis on hydrocarbons and textile dyes. It applies a descriptive bibliometric analysis to study statistical practicality-vs-applicability of bioremediation of emerging organic pollutants. The paper identifies efficient pathways for bioremediation of different types of organic pollutants and outlines the potential for an eco-friendly and economical approach for the biological remediation of micropollutants by microalgae. Facts and figures on various hazardous pollutants, constraints in their current removal from water at an industrial level, and promising future solutions are carefully presented here.


Subject(s)
Environmental Pollutants , Microalgae , Biodegradation, Environmental , Hydrocarbons , Wastewater
8.
Sci Total Environ ; 793: 148583, 2021 Nov 01.
Article in English | MEDLINE | ID: mdl-34328999

ABSTRACT

Water remediation is an essential component for sustainable development. Increasing population and rapid industrialization have contributed to the deterioration of water resources. In particular, effluents from chemical, pharmaceutical, petroleum industries, and anthropogenic activities have led to severe ecological degradation. Many of these detrimental pollutants are highly toxic even at low concentrations, acting as carcinogens and inflicting severe long-lasting effects on human health. This review underscores the potential applications of engineered carbon-based materials for effective wastewater treatment. It focuses on the performance as well as efficiency of activated carbon, graphene nanomaterial, and carbon nanotubes, both with and without chemical functionalization. Plausible mechanisms of action between the chemically functionalized adsorbent and pollutants are also discussed. Based on the keywords from the literature published in the recent five years, a statistical practicality-vs-applicability analysis of these three materials is also provided. The review will provide a deep understanding of the physical or chemical interactions of the wastewater pollutants with carbon materials.


Subject(s)
Graphite , Nanotubes, Carbon , Water Pollutants, Chemical , Water Purification , Adsorption , Humans , Wastewater , Water , Water Pollutants, Chemical/analysis
9.
Acta Biomater ; 128: 393-407, 2021 07 01.
Article in English | MEDLINE | ID: mdl-33933694

ABSTRACT

Membrane protein structures provide atomic level insight into essential biochemical processes and facilitate protein structure-based drug design. However, the inherent instability of these bio-macromolecules outside lipid bilayers hampers their structural and functional study. Detergent micelles can be used to solubilize and stabilize these membrane-inserted proteins in aqueous solution, thereby enabling their downstream characterizations. Membrane proteins encapsulated in detergent micelles tend to denature and aggregate over time, highlighting the need for development of new amphiphiles effective for protein solubility and stability. In this work, we present newly-designed maltoside detergents containing a pendant chain attached to a glycerol-decorated tris(hydroxymethyl)methane (THM) core, designated GTMs. One set of the GTMs has a hydrophobic pendant (ethyl chain; E-GTMs), and the other set has a hydrophilic pendant (methoxyethoxylmethyl chain; M-GTMs) placed in the hydrophobic-hydrophilic interfaces. The two sets of GTMs displayed profoundly different behaviors in terms of detergent self-assembly and protein stabilization efficacy. These behaviors mainly arise from the polarity difference between two pendants (ethyl and methoxyethoxylmethyl chains) that results in a large variation in detergent conformation between these sets of GTMs in aqueous media. The resulting high hydrophobic density in the detergent micelle interior is likely responsible for enhanced efficacy of the M-GTMs for protein stabilization compared to the E-GTMs and a gold standard detergent DDM. A representative GTM, M-GTM-O12, was more effective for protein stability than some recently developed detergents including LMNG. This is the first case study investigating the effect of pendant polarity on detergent geometry correlated with detergent efficacy for protein stabilization. STATEMENT OF SIGNIFICANCE: This study introduces new amphiphiles for use as biochemical tools in membrane protein studies. We identified a few hydrophilic pendant-bearing amphiphiles such as M-GTM-O11 and M-GTM-O12 that show remarkable efficacy for membrane protein solubilization and stabilization compared to a gold standard DDM, the hydrophobic counterparts (E-GTMs) and a significantly optimized detergent LMNG. In addition, detergent results obtained in the current study reveals the effect of detergent pendant polarity on protein solubility and stability. Thus, the current study represents both significant chemical and conceptual advance. The detergent tools and design principle introduced here advance protein science and facilitate structure-based drug design and development.


Subject(s)
Detergents , Membrane Proteins , Detergents/pharmacology , Hydrophobic and Hydrophilic Interactions , Micelles , Molecular Conformation , Protein Stability , Solubility
10.
ACS Chem Biol ; 14(8): 1717-1726, 2019 08 16.
Article in English | MEDLINE | ID: mdl-31305987

ABSTRACT

Detergents are widely used to isolate membrane proteins from lipid bilayers, but many proteins solubilized in conventional detergents are structurally unstable. Thus, there is major interest in the development of novel amphiphiles to facilitate membrane protein research. In this study, we have designed and synthesized novel amphiphiles with a rigid scyllo-inositol core, designated scyllo-inositol glycosides (SIGs). Varying the headgroup structure allowed the preparation of three sets of SIGs that were evaluated for their effects on membrane protein stability. When tested with a few model membrane proteins, representative SIGs conferred enhanced stability to the membrane proteins compared to a gold standard conventional detergent (DDM). Of the novel amphiphiles, a SIG designated STM-12 was most effective at preserving the stability of the multiple membrane proteins tested here. In addition, a comparative study of the three sets suggests that several factors, including micelle size and alkyl chain length, need to be considered in the development of novel detergents for membrane protein research. Thus, this study not only describes new detergent tools that are potentially useful for membrane protein structural study but also introduces plausible correlations between the chemical properties of detergents and membrane protein stabilization efficacy.


Subject(s)
Bacterial Proteins/metabolism , Detergents/chemistry , Glycosides/chemistry , Inositol/analogs & derivatives , Inositol/chemistry , Membrane Proteins/metabolism , Aquifex , Bacteria/chemistry , Detergents/chemical synthesis , Glycosides/chemical synthesis , Molecular Conformation , Protein Stability , Rhodobacter capsulatus/chemistry , Salmonella typhimurium/enzymology
11.
Chem Sci ; 8(12): 8315-8324, 2017 Dec 01.
Article in English | MEDLINE | ID: mdl-29619178

ABSTRACT

The critical contribution of membrane proteins in normal cellular function makes their detailed structure and functional analysis essential. Detergents, amphipathic agents with the ability to maintain membrane proteins in a soluble state in aqueous solution, have key roles in membrane protein manipulation. Structural and functional stability is a prerequisite for biophysical characterization. However, many conventional detergents are limited in their ability to stabilize membrane proteins, making development of novel detergents for membrane protein manipulation an important research area. The architecture of a detergent hydrophobic group, that directly interacts with the hydrophobic segment of membrane proteins, is a key factor in dictating their efficacy for both membrane protein solubilization and stabilization. In the current study, we developed two sets of maltoside-based detergents with four alkyl chains by introducing dendronic hydrophobic groups connected to a trimaltoside head group, designated dendronic trimaltosides (DTMs). Representative DTMs conferred enhanced stabilization to multiple membrane proteins compared to the benchmark conventional detergent, DDM. One DTM (i.e., DTM-A6) clearly outperformed DDM in stabilizing human ß2 adrenergic receptor (ß2AR) and its complex with Gs protein. A further evaluation of this DTM led to a clear visualization of ß2AR-Gs complex via electron microscopic analysis. Thus, the current study not only provides novel detergent tools useful for membrane protein study, but also suggests that the dendronic architecture has a role in governing detergent efficacy for membrane protein stabilization.

12.
Chem Sci ; 7(3): 1933-1939, 2016 Mar 01.
Article in English | MEDLINE | ID: mdl-27110345

ABSTRACT

Membrane proteins are amphipathic bio-macromolecules incompatible with the polar environments of aqueous media. Conventional detergents encapsulate the hydrophobic surfaces of membrane proteins allowing them to exist in aqueous solution. Membrane proteins stabilized by detergent micelles are used for structural and functional analysis. Despite the availability of a large number of detergents, only a few agents are sufficiently effective at maintaining the integrity of membrane proteins to allow successful crystallization. In the present study, we describe a novel class of synthetic amphiphiles with a branched tail group and a triglucoside head group. These head and tail groups were connected via an amide or ether linkage by using a tris(hydroxylmethyl)aminomethane (TRIS) or neopentyl glycol (NPG) linker to produce TRIS-derived triglucosides (TDTs) and NPG-derived triglucosides (NDTs), respectively. Members of this class conferred enhanced stability on target membrane proteins compared to conventional detergents. Because of straightforward synthesis of the novel agents and their favourable effects on a range of membrane proteins, these agents should be of wide applicability to membrane protein science.

13.
Methods Enzymol ; 557: 57-94, 2015.
Article in English | MEDLINE | ID: mdl-25950960

ABSTRACT

Membrane proteins (MPs) are insoluble in aqueous media as a result of incompatibility between the hydrophilic property of the solvent molecules and the hydrophobic nature of MP surfaces, normally associated with lipid membranes. Amphipathic compounds are necessary for extraction of these macromolecules from the native membranes and their maintenance in solution. The amphipathic agents surround the hydrophobic segments of MPs, thus serving as a membrane mimetic system. Of the available amphipathic agents, detergents are most widely used for MP manipulation. However, MPs encapsulated by conventional detergent micelles have a tendency to undergo structural degradation, hampering MP advance, and necessitating the development of novel detergents with enhanced efficacy for MP study. In this chapter, we will introduce both conventional and novel classes of detergents and discuss about the chemical structures, design principles, and efficacies of these compounds for MP solubilization and stabilization. The behaviors of those agents toward MP crystallization will be a primary topic in our discussion. This discussion highlights the common features of popular conventional/novel detergents essential for successful MP structural study. The conclusions reached by this discussion would not only enable MP scientists to rationally select a set of detergent candidates among a large number of detergents but also provide detergent inventors with useful guidelines in designing novel amphipathic systems.


Subject(s)
Detergents/chemistry , Membrane Proteins/isolation & purification , Micelles , Animals , Cell Membrane/chemistry , Humans , Hydrophobic and Hydrophilic Interactions , Membrane Proteins/chemistry , Solubility
14.
Chem Asian J ; 9(1): 110-6, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24347070

ABSTRACT

Amphipathic agents called detergents serve as membrane-mimetic systems to maintain the native structures of membrane proteins during their manipulation. However, membrane proteins solubilized in conventional detergents tend to undergo denaturation and aggregation, necessitating the development of novel amphipathic agents with enhanced properties. Here we describe several new amphiphiles that contain an N-oxide group as the hydrophilic portion. The new amphiphiles have been evaluated for the ability to solubilize and stabilize a fragile multi-subunit assembly from biological membranes. We found that cholate-based agents were promising in supporting retention of the native protein quaternary structure, while deoxycholate-based amphiphiles were highly efficient in extracting/solubilizing the intact superassembly from the native membrane. Monitoring superassembly solubilization and stabilization as a function of variation in amphiphile structure led us to propose that a non-hydrocarbon moiety such as an amide, ether, or a hydroxy group present in the lipophilic regions can manifest distinctive effects in the context of membrane protein manipulation.


Subject(s)
Detergents/chemistry , Hydrophobic and Hydrophilic Interactions , Membrane Proteins/chemistry , Oxides/chemistry , Molecular Structure
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