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AIDS Res Hum Retroviruses ; 37(12): 994-997, 2021 12.
Article in English | MEDLINE | ID: mdl-34652965

ABSTRACT

HIV-1 subtype/circulating recombinant form (CRF) distribution of HIV-1-positive specimens for evaluating HIV in vitro diagnostics (IVDs) was examined and compared with the HIV-1 epidemic in Japan. The nucleotide sequences of the gag-pol region of 173 plasma specimens (84, provided in 2007, and 89 in 2013-2015) were determined. HIV-1 subtype/CRF classification was performed based on the phylogenetic analyses of the sequences. The subtype/CRF distribution resulting in this study was similar to that of a previous epidemiological report. Three CRF02_AG and one unique recombinant form, including subtype G and A regions, were observed in the 2013 and 2014 specimens, except in the 2007 specimens. The reference panel consisting of these specimens was practical for the evaluation of HIV IVDs in Japan.


Subject(s)
HIV Infections , HIV-1 , Base Sequence , HIV Infections/diagnosis , HIV-1/genetics , Humans , Japan/epidemiology , Phylogeny
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