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1.
Bull Entomol Res ; 99(4): 371-5, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19063759

ABSTRACT

Analysis of DNA sequence data has proven invaluable for defining the relationships among taxa, as well as resolving their evolutionary histories. Here, we analyzed DNA sequence variation of one mitochondrial gene (COI) and two nuclear regions (ITSI and II) to clarify the phylogenetic position of Culicoides dewulfi, a midge species widely spread in Europe and a suspected vector for bluetongue virus. Various authors have described C. dewulfi either as part of the Culicoides obsoletus sensu lato complex or as a separate taxonomic group. A maximum likelihood phylogeny, based upon an optimal model of sequence evolution, placed C. dewulfi outwith the C. obsoletus s.l. complex. Shimodaira-Hasegawa test highlighted that this topology was significantly more likely than any topology that placed C. dewulfi anywhere else in the phylogeny. As such, C. dewulfi should not be considered part of the C. obsoletus s.l. complex and instead be treated as a separate group, phylogenetically close to the classical Old World vector C. imicola.


Subject(s)
Ceratopogonidae/classification , Ceratopogonidae/genetics , Genetic Variation , Phylogeny , Animals , Base Sequence , Computational Biology , Likelihood Functions , Models, Genetic , Molecular Sequence Data , Sequence Analysis, DNA , Species Specificity
2.
Parasitol Res ; 100(5): 1015-21, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17136387

ABSTRACT

Microsatellites are repetitive genomic elements that show high levels of variation and therefore provide excellent tools to study the genetics of eukaryotic organisms. Hookworms are extremely common and important nematode parasites of humans and animals, causing potentially serious disease morbidity. Control of hookworms in dogs is achieved by frequent treatment with anthelmintics, and in humans, anthelmintics are frequently administered in a mass-treatment community-wide approach. Understanding the population genetics of hookworms has important implications for studies on the development and spread of drug resistance. We investigated the genome of Ancylostoma caninum for microsatellites by developing and then screening an enriched genomic library as well as by data mining published sequences of a whole genome shotgun library. Investigations revealed a high abundance of trinucleotide repeats. Dinucleotide repeats were characterized by a high number of AT, GA, and GT repeats. After testing and optimization of 68 markers, a panel of 34 polymorphic microsatellite markers were selected. Microsatellite analysis of hookworm isolates revealed a high degree of polymorphism, which was not influenced by the length of the repeats. This panel of microsatellite markers makes it possible to pursue investigations on the population genetics of A. caninum. Furthermore, a number of the markers demonstrated suitability for analysis of the human hookworm species Necator americanus and A. duodenale.


Subject(s)
Ancylostoma/classification , Ancylostoma/genetics , Ancylostomiasis/veterinary , DNA, Helminth/genetics , Dog Diseases/parasitology , Microsatellite Repeats/genetics , Polymorphism, Genetic , Ancylostoma/isolation & purification , Ancylostomiasis/parasitology , Animals , Base Sequence , DNA, Helminth/chemistry , Dogs , Gene Library , Humans , Molecular Sequence Data , Necator americanus/classification , Necator americanus/genetics , Necatoriasis/parasitology , Sequence Analysis, DNA
3.
Trop Med Int Health ; 9(7): 812-6, 2004 Jul.
Article in English | MEDLINE | ID: mdl-15228491

ABSTRACT

Between 1997 and 2002, 49 strains of Leishmania were isolated from the cutaneous lesions of Palestinians living in and around Jericho. A polymerase chain reaction (PCR) amplifying the ribosomal internal transcribed spacer 1 (ITS1-PCR) was applied to their cultured promastigotes and to 207 individuals' skin scrapings spotted on filter-papers, 107 of which proved positive for leishmanial DNA. Species identification was performed by restricting the ITS1-PCR amplification products from the cultured promastigotes and the amastigotes in the scrapings with the endonuclease HaeIII. Of the 49 cultures, 28 (57%) were L. major and 21 (43%) were L. tropica. Of the 107 dermal samples tested directly, 53 (49.5%) were infected with L. major, 52 (48.5%) with L. tropica and two remained unidentified. This is the first time L. tropica has been exposed in the population of the Jericho area and on such a large scale. The itinerant behaviour of some of this population precludes categorically declaring that L. tropica has recently become established in this classical focus of L. major. For this and although 88.2% of the cases of L. tropica claimed not to have travelled out of the vicinity of Jericho, local infected sand fly vectors of L. tropica must be caught, identified and, if possible, shown to harbour infections, and, if one exists, an animal reservoir host should also be exposed to endorse whether the cases caused by L. tropica were imported or autochthonous.


Subject(s)
Leishmania tropica/isolation & purification , Leishmaniasis, Cutaneous/parasitology , Animals , Arabs , DNA, Protozoan/analysis , Humans , Israel/epidemiology , Israel/ethnology , Leishmania tropica/genetics , Leishmaniasis, Cutaneous/epidemiology , Leishmaniasis, Cutaneous/pathology , Nucleic Acid Amplification Techniques , Polymerase Chain Reaction/methods
4.
Blood ; 95(6): 2098-103, 2000 Mar 15.
Article in English | MEDLINE | ID: mdl-10706880

ABSTRACT

Although bispecific antibodies directed against malignant lymphoma have been shown to be effective in vitro and in vivo, extended clinical trials so far have been hampered by the fact that conventional approaches to produce these antibodies suffer from low yields, ill-defined byproducts, or laborious purification procedures. To overcome this problem, we have generated a small, recombinant, lymphoma-directed, bispecific single-chain (bsc) antibody according to a novel technique recently described. The antibody consists of 2 different single-chain Fv fragments joined by a glycine-serine linker. One specificity is directed against the CD3 antigen of human T cells, and the other antigen-binding site engages the pan-B-cell marker CD19, uniformly expressed on the vast majority of B-cell malignancies. The construct was expressed in Chinese hamster ovary cells and purified by its C-terminal histioline tag. Specific binding to CD19 and CD3 was demonstrated by fluorescence-activated cell sorter analysis. By redirecting unstimulated primary human T cells derived from the peripheral blood against CD19-positive lymphoma cells, the bscCD19 x CD3 antibody showed significant cytotoxic activity at very low concentrations of 10 to 100 pg/mL and at effector to target cell ratios as low as 2:1. Moreover, strong lymphoma-directed cytotoxicity at low antibody concentrations was rapidly induced during 4 hours even in experiments without any T-cell prestimulation. Thus, this particular antibody proves to be much more efficacious than the bispecific antibodies described until now. Therefore, the described bscCD19 x CD3 molecule should be a suitable candidate to prove the therapeutic benefit of bispecific antibodies in the treatment of non-Hodgkin lymphoma. (Blood. 2000;95:2098-2103)


Subject(s)
Antibodies, Bispecific/therapeutic use , Antigens, CD19/therapeutic use , CD3 Complex/therapeutic use , Cytotoxicity, Immunologic , Lymphoma, B-Cell/immunology , T-Lymphocytes/metabolism , Antibody Specificity , Cell Death/drug effects , Cell Division/drug effects , Coculture Techniques , Dose-Response Relationship, Drug , Flow Cytometry , Humans , Immunoglobulin Variable Region/metabolism , Immunotherapy/methods , Leukocytes, Mononuclear/metabolism , Lymphocyte Subsets/metabolism , Lymphoma, B-Cell/therapy , Tumor Cells, Cultured
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