Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 22
Filter
1.
Microorganisms ; 12(4)2024 Apr 14.
Article in English | MEDLINE | ID: mdl-38674737

ABSTRACT

The Escherichia coli Keio mutant collection has been a tool for assessing the role of specific genes and determining their role in E. coli physiology and uncovering novel functions. In this work, specific mutants in the DNA repair pathways and oxidative stress response were evaluated to identify the primary targets of silver nanoparticles (NPs) and their mechanism of action. The results presented in this work suggest that NPs mainly target DNA via double-strand breaks and base modifications since the recA, uvrC, mutL, and nfo mutants rendered the most susceptible phenotype, rather than involving the oxidative stress response. Concomitantly, during the establishment of the control conditions for each mutant, the katG and sodA mutants showed a hypersensitive phenotype to mitomycin C, an alkylating agent. Thus, we propose that KatG catalase plays a key role as a cellular chaperone, as reported previously for the filamentous fungus Neurospora crassa, a large subunit catalase. The Keio collection mutants may also be a key tool for assessing the resistance mechanism to metallic NPs by using their potential to identify novel pathways involved in the resistance to NPs.

2.
PeerJ ; 11: e16309, 2023.
Article in English | MEDLINE | ID: mdl-37849831

ABSTRACT

The complex metabolism of Escherichia coli has been extensively studied, including its response to oxygen availability. The ArcA/B two-component system (TCS) is the key regulator for the transition between these two environmental conditions and has been thoroughly characterized using genetic and biochemical approaches. Still, to date, limited structural data is available. The breakthrough provided by AlphaFold2 in 2021 has brought a reliable tool to the scientific community for assessing the structural features of complex proteins. In this report, we analyzed the structural aspects of the ArcA/B TCS using AlphaFold2 models. The models are consistent with the experimentally determined structures of ArcB kinase. The predicted structure of the dimeric form of ArcB is consistent with the extensive genetic and biochemical data available regarding mechanistic signal perception and regulation. The predicted interaction of the dimeric form of ArcB with its cognate response regulator (ArcA) is also consistent with both the forward and reverse phosphotransfer mechanisms. The ArcB model was used to detect putative binding cavities to anaerobic metabolites, encouraging testing of these predictions experimentally. Finally, the highly accurate models of other ArcB homologs suggest that different experimental approaches are needed to determine signal perception in kinases lacking the PAS domain. Overall, ArcB is a kinase with features that need further testing, especially in determining its crystal structure under different conditions.


Subject(s)
Escherichia coli Proteins , Anaerobiosis , Bacterial Outer Membrane Proteins/genetics , Bacterial Proteins/genetics , Dimerization , Escherichia coli/genetics , Escherichia coli Proteins/genetics , Models, Theoretical , Phosphorylation , Protein Kinases/genetics , Repressor Proteins/genetics
3.
Molecules ; 28(13)2023 Jun 28.
Article in English | MEDLINE | ID: mdl-37446705

ABSTRACT

The signal transduction paradigm in bacteria involves two-component systems (TCSs). Asgardarchaeota are archaea that may have originated the current eukaryotic lifeforms. Most research on these archaea has focused on eukaryotic-like features, such as genes involved in phagocytosis, cytoskeleton structure, and vesicle trafficking. However, little attention has been given to specific prokaryotic features. Here, the sequence and predicted structural features of TCS sensor kinases analyzed from two metagenome assemblies and a genomic assembly from cultured Asgardian archaea are presented. The homology of the sensor kinases suggests the grouping of Lokiarchaeum closer to bacterial homologs. In contrast, one group from a Lokiarchaeum and a meta-genome assembly from Candidatus Heimdallarchaeum suggest the presence of a set of kinases separated from the typical bacterial TCS sensor kinases. AtoS and ArcB homologs were found in meta-genome assemblies along with defined domains for other well-characterized sensor kinases, suggesting the close link between these organisms and bacteria that may have resulted in the metabolic link to the establishment of symbiosis. Several kinases are predicted to be cytoplasmic; some contain several PAS domains. The data shown here suggest that TCS kinases in Asgardian bacteria are witnesses to the transition from bacteria to eukaryotic organisms.


Subject(s)
Archaea , Eukaryotic Cells , Archaea/genetics , Archaea/metabolism , Bacteria/genetics , Eukaryota/genetics , Prokaryotic Cells , Evolution, Molecular , Phylogeny
4.
Pathogens ; 12(3)2023 Mar 21.
Article in English | MEDLINE | ID: mdl-36986411

ABSTRACT

Entamoeba histolytica virulence results from complex host-parasite interactions implicating multiple amoebic components (e.g., Gal/GalNAc lectin, cysteine proteinases, and amoebapores) and host factors (microbiota and immune response). UG10 is a strain derived from E. histolytica virulent HM-1:IMSS strain that has lost its virulence in vitro and in vivo as determined by a decrease of hemolytic, cytopathic, and cytotoxic activities, increased susceptibility to human complement, and its inability to form liver abscesses in hamsters. We compared the transcriptome of nonvirulent UG10 and its parental HM-1:IMSS strain. No differences in gene expression of the classical virulence factors were observed. Genes downregulated in the UG10 trophozoites encode for proteins that belong to small GTPases, such as Rab and AIG1. Several protein-coding genes, including iron-sulfur flavoproteins and heat shock protein 70, were also upregulated in UG10. Overexpression of the EhAIG1 gene (EHI_180390) in nonvirulent UG10 trophozoites resulted in augmented virulence in vitro and in vivo. Cocultivation of HM-1:IMSS with E. coli O55 bacteria cells reduced virulence in vitro, and the EhAIG1 gene expression was downregulated. In contrast, virulence was increased in the monoxenic strain UG10, and the EhAIG1 gene expression was upregulated. Therefore, the EhAIG1 gene (EHI_180390) represents a novel virulence determinant in E. histolytica.

5.
PeerJ ; 10: e13772, 2022.
Article in English | MEDLINE | ID: mdl-35880217

ABSTRACT

Organisms need mechanisms to perceive the environment and respond accordingly to environmental changes or the presence of hazards. Transcription factors (TFs) are required for cells to respond to the environment by controlling the expression of genes needed. Escherichia coli has been the model bacterium for many decades, and still, there are features embedded in its genome that remain unstudied. To date, 58 TFs remain poorly characterized, although their binding sites have been experimentally determined. This study showed that these TFs have sequence variation at the third codon position G+C content but maintain the same Codon Adaptation Index (CAI) trend as annotated functional transcription factors. Most of these transcription factors are in areas of the genome where abundant repetitive and mobile elements are present. Sequence divergence points to groups with distinctive sequence signatures but maintaining the same type of DNA binding domain. Finally, the analysis of the promoter sequences of the 58 TFs showed A+T rich regions that agree with the features of horizontally transferred genes. The findings reported here pave the way for future research of these TFs that may uncover their role as spare factors in case of lose-of-function mutations in core TFs and trace back their evolutionary history.


Subject(s)
Escherichia coli , Transcription Factors , Transcription Factors/genetics , Escherichia coli/genetics , Biological Evolution , Promoter Regions, Genetic/genetics , Codon
6.
AMB Express ; 12(1): 2, 2022 Jan 06.
Article in English | MEDLINE | ID: mdl-34989906

ABSTRACT

The presence of pollutants in soil and water has given rise to diverse analytical and biological approaches to detect and measure contaminants in the environment. Using bacterial cells as reporter strains represents an advantage for detecting pollutants present in soil or water samples. Here, an Escherichia coli reporter strain expressing a chromoprotein capable of interacting with soil or water samples and responding to DNA damaging compounds is validated. The reporter strain generates a qualitative signal and is based on the expression of the coral chromoprotein AmilCP under the control of the recA promoter. This strain can be used simply by applying soil or water samples directly and rendering activation upon DNA damage. This reporter strain responds to agents that damage DNA (with an apparent detection limit of 1 µg of mitomycin C) without observable response to membrane integrity damage, protein folding or oxidative stress generating agents, in the latter case, DNA damage was observed. The developed reporter strain reported here is effective for the detection of DNA damaging agents present in soils samples. In a proof-of-concept analysis using soil containing chromium, showing activation at 15.56 mg/L of Cr(VI) present in soil and leached samples and is consistent with Cr(III) toxicity at high concentrations (130 µg). Our findings suggest that chromogenic reporter strains can be applied for simple screening, thus reducing the number of samples requiring analytical techniques.

7.
J Microbiol Methods ; 187: 106260, 2021 08.
Article in English | MEDLINE | ID: mdl-34090997

ABSTRACT

Nitric oxide (NO) is a reactive gas that participates in many physiological as well as pathogenic processes in higher eukaryotic organisms. Inflammatory responses elicit higher levels of this molecule. Nevertheless, there are many technical challenges to accurately measure the amount of NO produced. Previously, a method using whole-cell extracts from Escherichia coli was able to generate the conversion of nitrate into nitrite to measure the amount of nitrate or indirectly the NO present in a sample using the Griess reaction. Here we present an improvement to this method, by using E. coli whole-cell extracts lacking one of the two nitrite reductases, rendered a more precise measurement when coupled with the Griess reaction than our previous report. Alternatively, osmotic stress showed to downregulate the expression of both nitrate reductases, which can be an alternative for indirect nitrate and NO reduction. The results presented here show an easy method for nitrate and NO reduction to nitrite and avoid the reconversion to nitrate, also as an alternative for other analytical methods that are based on cadmium, purified nitrate reductase enzyme, or salicylic methods to reduce NO. This method can be widely used for measuring NO production in living organisms, soil, and other relevant microbiological samples.


Subject(s)
Escherichia coli/metabolism , Macrophages/metabolism , Nitric Oxide/analysis , Nitrites/analysis , Animals , Cytochrome c Group/genetics , Escherichia coli/genetics , Macrophage Activation , Macrophages/immunology , Mice , Mutation , Nitrate Reductase/metabolism , Nitrates/metabolism , Nitric Oxide/metabolism , Nitrites/metabolism , Oxidation-Reduction , RAW 264.7 Cells , Sensitivity and Specificity
8.
Antonie Van Leeuwenhoek ; 114(2): 209-221, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33394209

ABSTRACT

Entamoeba histolytica represents a useful model in parasitic organisms due to its complex genomic organization and survival mechanisms. To counteract pathogenic organisms, it is necessary to characterize their molecular biology to design new strategies to combat them. In this report, we investigated a less-known genetic element, short interspersed nuclear element 2 (SINE2), that is present in this ameba and is highly transcribed and polyadenylated. In this study, we show that in two different nonvirulent strains of E. histolytica, SINE2 is differentially processed into two transcript fragments, that is, a full-length 560-nt fragment and a shorter 393-nt fragment bearing an approximately 18-nt polyadenylation tail. Sequence analysis of the SINE2 transcript showed that a Musashi-like protein may bind to it. Also, two putative Musashi-like sequences were identified on the transcript. Semiquantitative expression analysis of the two Musashi-like proteins identified in the E. histolytica genome (XP_648918 and XP_649094) showed that XP_64094 is overexpressed in the nonvirulent strains tested. The information available in the literature and the results presented in this report indicate that SINE2 may affect other genes, as observed with the epigenetic silencing of the G3 strain, by an antisense mechanism or via RNA-protein interactions that may ultimately be involved in the phenotype of nonvirulent strains of E. histolytica.


Subject(s)
Entamoeba histolytica , Polyadenylation , Entamoeba histolytica/genetics
9.
Protein Pept Lett ; 27(1): 74-84, 2020.
Article in English | MEDLINE | ID: mdl-31385759

ABSTRACT

BACKGROUND: Marine sessile organisms display a color palette that is the result of the expression of fluorescent and non-fluorescent proteins. Fluorescent proteins have uncovered transcriptional regulation, subcellular localization of proteins, and the fate of cells during development. Chromoproteins have received less attention until recent years as bioreporters. Here, we studied the properties of aeBlue, a a 25.91 kDa protein from the anemone Actinia equina. OBJECTIVE: To assess the properties of aeBlue chromoprotein under different physicochemical conditions. METHODS: In this article, during the purification of aeBlue we uncovered that it suffered a color shift when frozen. We studied the color shift by different temperature incubation and physicochemical conditions and light spectroscopy. To assess the possible structural changes in the protein, circular dichroism analysis, size exclusion chromatography and native PAGE was performed. RESULTS: We uncover that aeBlue chromoprotein, when expressed from a synthetic construct in Escherichia coli, showed a temperature dependent color shift. Protein purified at 4 °C by metal affinity chromatography exhibited a pinkish color and shifts back at higher temperatures to its intense blue color. Circular dichroism analysis revealed that the structure in the pink form of the protein has reduced secondary structure at 4 °C, but at 35 °C and higher, the structure shifts to a native conformation and Far UV- vis CD spectra revealed the shift in an aromatic residue of the chromophore. Also, the chromophore retains its properties in a wide range of conditions (pH, denaturants, reducing and oxidants agents). Quaternary structure is also maintained as a tetrameric conformation as shown by native gel and size exclusion chromatography. CONCLUSION: Our results suggest that the chromophore position in aeBlue is shifted from its native position rendering the pink color and the process to return it to its native blue conformation is temperature dependent.


Subject(s)
Coloring Agents/chemistry , Luminescent Proteins/chemistry , Pigments, Biological/chemistry , Proteins/chemistry , Sea Anemones/chemistry , Amino Acid Sequence , Animals , Cloning, Molecular , Color , Coloring Agents/metabolism , Escherichia coli/metabolism , Gene Expression , Hydrogen-Ion Concentration , Light , Luminescent Proteins/metabolism , Models, Molecular , Oxidation-Reduction , Pigments, Biological/metabolism , Protein Conformation , Protein Denaturation , Proteins/metabolism , Spectrophotometry , Temperature
10.
PLoS Pathog ; 15(8): e1008016, 2019 08.
Article in English | MEDLINE | ID: mdl-31461501

ABSTRACT

Entamoeba histolytica is a pathogen that during its infective process confronts the host defenses, which damages the amoebic plasma membrane (PM), resulting in the loss of viability. However, it is unknown whether amoebic trophozoites are able to repair their PM when it is damaged. Acid sphingomyelinases (aSMases) have been reported in mammalian cells to promote endocytosis and removal of PM lesions. In this work, six predicted amoebic genes encoding for aSMases were found to be transcribed in the HM1:IMSS strain, finding that the EhaSM6 gene is the most transcribed in basal growth conditions and rendered a functional protein. The secreted aSMase activity detected was stimulated by Mg+2 and inhibited by Co+2. Trophozoites that overexpress the EhaSM6 gene (HM1-SM6HA) exhibit an increase of 2-fold in the secreted aSMase activity. This transfectant trophozoites exposed to pore-forming molecules (SLO, Magainin, ß-Defensin 2 and human complement) exhibited an increase from 6 to 25-fold in the secreted aSMase activity which correlated with higher amoebic viability in a Ca+2 dependent process. However, other agents that affect the PM such as hydrogen peroxide also induced an increase of secreted aSMase, but to a lesser extent. The aSMase6 enzyme is N- and C-terminal processed. Confocal and transmission electron microscopy showed that trophozoites treated with SLO presented a migration of lysosomes containing the aSMase towards the PM, inducing the formation of membrane patches and endosomes in the control strain. These cellular structures were increased in the overexpressing strain, indicating the involvement of the aSMase6 in the PM injury repair. The pore-forming molecules induced an increase in the expression of EhaSM1, 2, 5 and 6 genes, meanwhile, hydrogen peroxide induced an increase in all of them. In all the conditions evaluated, the EhaSM6 gene exhibited the highest levels of induction. Overall, these novel findings show that the aSMase6 enzyme from E. histolytica promotes the repair of the PM damaged with pore-forming molecules to prevent losing cell integrity. This novel system could act when encountered with the lytic defense systems of the host.


Subject(s)
Cell Membrane/physiology , Entamoeba histolytica/enzymology , Entamoebiasis/parasitology , Sphingomyelin Phosphodiesterase/metabolism , Trophozoites/metabolism , Calcium/metabolism , Entamoebiasis/metabolism , Humans , Sphingomyelin Phosphodiesterase/genetics , Trophozoites/growth & development
11.
Arch Microbiol ; 201(7): 999-1008, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31062059

ABSTRACT

Cellular membrane is a key component for maintaining cell shape and integrity. The classical membrane structure and function by Singer and Nicolson groundbreaking model has depicted the membrane as a homogeneous fluid structure. This view has changed by the discovery of discrete domains containing different lipid compositions, called lipid rafts, which play a key role in signal transduction in eukaryotic cells. In the past few years, lipid raft-like structures have been found in bacteria also, constituted by cardiolipin and other modified lipids, perhaps involved in generating a specific site for protein clustering. Here, we report the analysis of a protein termed YqiK from Escherichia coli, a prohibitin homolog that has been implicated in stress sensing by the formation of membrane-associated microdomains. The E. coli yqiK-deficient mutant strain showed an enhanced swimming behavior and was resistant to ampicillin but its response to other stressing conditions was similar to that of the wild-type strain. The abnormal swimming behavior is reversed when the protein is expressed in trans from a plasmid. Also, we demonstrate that YqiK is not redundant with QmcA, another flotillin homolog found in E. coli. Our results, along with the data available in the literature, suggest that YqiK may be involved in the formation of discrete membrane-associated signaling complexes that regulate and agglomerate signaling proteins to generate cell response to chemotaxis.


Subject(s)
Escherichia coli Proteins/metabolism , Escherichia coli/physiology , Membrane Proteins/metabolism , Repressor Proteins/metabolism , Cell Membrane/metabolism , Chemotaxis/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , Escherichia coli Proteins/genetics , Membrane Microdomains , Membrane Proteins/genetics , Mutation , Plasmids/genetics , Prohibitins , Repressor Proteins/genetics , Signal Transduction
12.
Exp Parasitol ; 194: 38-44, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30253133

ABSTRACT

Amoebiasis is a worldwide health problem caused by the pathogen Entamoeba histolytica. Several virulence factors have been implicated in host invasion, immune evasion, and tissue damage. There are still new factors that remain to be elucidated and characterized. In this work, we obtained amoebic transfectants overexpressing three of the neutral sphingomyelinase enzymes encoded in the E. histolytica genome. The EhnSM3 overexpression induced an increase in hemolytic and cytotoxic activities, besides an increase in gene expression of amoebapore A, B, and C. Meanwhile the EhnSM1 and EhnSM2 overexpression caused an increase in cytopathic activity. In all the neutral sphingomyelinases overexpressing strains, the gene expression levels for cysteine proteinase 5, adhesin 112 and, heavy and light Gal/GalNAc lectin subunits were not affected. We propose that the increase of cytotoxic and lytic effect of EhnSM3 overexpressed strain can be related to the sum of the effect of EhnSM3 plus amoebapores, in a process cell contact-dependent or as mediator by inducing the gene expression of amoebapores enabling a link between EhnSM3 with the virulence phenotype in E. histolytica. Our results suggest a differential role for neutral sphingomyelinases in E. histolytica virulence.


Subject(s)
Entamoeba histolytica/pathogenicity , Sphingomyelin Phosphodiesterase/metabolism , Animals , Dogs , Entamoeba histolytica/enzymology , Entamoeba histolytica/genetics , Erythrocytes/metabolism , Gene Expression , Genome, Protozoan , Hemolysis , Humans , Madin Darby Canine Kidney Cells , Sphingomyelin Phosphodiesterase/genetics , Sphingomyelin Phosphodiesterase/isolation & purification , Sphingomyelins/metabolism , Transfection , Virulence
13.
Molecules ; 23(6)2018 05 31.
Article in English | MEDLINE | ID: mdl-29857551

ABSTRACT

Cloning and expression plasmids are the workhorses of modern molecular biology. Despite the pathway paved by synthetic biology, laboratories around the globe still relay on standard cloning techniques using plasmids with reporter proteins for positive clone selection, such as ß-galactosidase alpha peptide complementation for blue/white screening or ccdB, which encodes for a toxic DNA gyrase. These reporters, when interrupted, serve as a positive clone detection system. In the present report, we show that molecular cloning plasmids bearing the coding sequence for a 25.4 kDa protein, AmilCP, encoded by a 685 bp gene, that is well expressed in Escherichia coli, render blue-purple colonies. Using this reporter protein, we developed and tested a cloning system based on the constitutive expression of the non-toxic AmilCP protein, that once interrupted, the loss of purple color serves to facilitate positive clone selection. The main advantage of this system is that is less expensive than other systems since media do not contain chromogenic markers such as X-gal, which is both expensive and cumbersome to prepare and use, or inductors such as IPTG. We also designed an inducible expression plasmid suitable for recombinant protein expression that also contains AmilCP cloning selection marker, a feature not commonly found in protein expression plasmids. The use of chromogenic reporters opens an important avenue for its application in other organisms besides E. coli for clone selection or even for mutant selection.


Subject(s)
Bacterial Proteins/genetics , Clonal Evolution , Cloning, Molecular , Gene Expression , Plasmids/genetics , Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Gene Order , Genes, Reporter , Models, Molecular , Protein Conformation
14.
Exp Parasitol ; 187: 86-92, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29476758

ABSTRACT

Entamoeba histolytica genetic organization and genome structure is complex and under intense research. The genome is fully sequenced, and several tools have been developed for the molecular study of this organism. Nevertheless, good protein tracking tags that are easy to measure and image, like the fluorescent proteins are lacking. In this report, we codon-optimized the red fluorescent protein from the coral Discosoma striata (DsRFP) for its use in E. histolytica and demonstrated functionality in vivo. We envision that this protein can be widely used for the development of transcriptional reporter systems and protein-tagging applications.


Subject(s)
Entamoeba histolytica/metabolism , Luminescent Agents/metabolism , Luminescent Proteins/metabolism , Animals , Anthozoa/chemistry , Cloning, Molecular , Codon/physiology , Entamoeba histolytica/genetics , Entamoeba histolytica/pathogenicity , Flow Cytometry , Gene Expression , Luminescent Proteins/genetics , Microscopy, Confocal , Plasmids/genetics , Plasmids/metabolism , Polymerase Chain Reaction , Restriction Mapping , Sphingomyelin Phosphodiesterase/genetics , Virulence , Red Fluorescent Protein
15.
Clín. salud ; 27(3): 147-155, nov. 2016. tab, ilus
Article in Spanish | IBECS | ID: ibc-157646

ABSTRACT

El presente estudio explora la relación entre la disociación psicológica y somática y su asociación con la sugestionabilidad, alexitimia, personalidad y dificultades en la regulación emocional. Los resultados sobre la muestra de 355 participantes indican la relación entre ambos tipos de disociación, la sugestionabilidad, las dificultades en la regulación emocional y la presencia de características diferenciadores de personalidad en ambos tipos de síntomas disociativos, mostrándose mayor neuroticismo, búsqueda de sensaciones y apertura, así como menor amabilidad y responsabilidad en la disociación psicológica. En la disociación somática, la personalidad mostró únicamente relación con la faceta de ansiedad. La edad también se relaciona de forma diferencial dependiendo de los síntomas disociativos presentes. Estos resultados ponen de manifiesto la importancia de estudiar de forma conjunta ambos tipos de síntomas disociativos, psicológicos y somáticos


The present paper explores the relationship between psychological and somatic dissociation and different personality and emotional variables, including suggestibility, alexithymia, and emotional regulation and dysregulation. The results with a sample of 355 partipants of a normal population reveal that there is a positive relationship between both types of dissociation, suggestibility and emotional dysregulation. Likewise, there were different patterns of personality associated both to psychological and somatic dissociation. Correlations found in this study put forward the importance to take into account both types of dissociactive symptoms, psychological and somatic ones


Subject(s)
Humans , Male , Female , Adult , Middle Aged , Dissociative Disorders/psychology , Dissociative Disorders/therapy , Personality/physiology , Suggestion , Affective Symptoms/psychology , Stress, Psychological/psychology , Stress, Psychological/therapy , Emotional Adjustment/physiology , Social Adjustment , Genetic Therapy/methods
16.
Molecules ; 20(7): 12436-49, 2015 Jul 08.
Article in English | MEDLINE | ID: mdl-26184131

ABSTRACT

In vitro studies to fourteen previously synthesized chromone-tetrazoles and four novel fluorine-containing analogs were conducted against pathogenic protozoan (Entamoeba histolytica), pathogenic bacteria (Pseudomonas aeruginosa, and Staphylococcus aureus), and human fungal pathogens (Sporothrix schenckii, Candida albicans, and Candida tropicalis), which have become in a serious health problem, mainly in tropical countries.


Subject(s)
Anti-Bacterial Agents/pharmacology , Antifungal Agents/pharmacology , Antiprotozoal Agents/pharmacology , Chromones/pharmacology , Tetrazoles/pharmacology , Anti-Bacterial Agents/chemical synthesis , Antifungal Agents/chemical synthesis , Antiprotozoal Agents/chemical synthesis , Candida albicans/drug effects , Candida albicans/growth & development , Candida albicans/pathogenicity , Candida tropicalis/drug effects , Candida tropicalis/growth & development , Candida tropicalis/pathogenicity , Chromones/chemical synthesis , Entamoeba histolytica/drug effects , Entamoeba histolytica/growth & development , Entamoeba histolytica/pathogenicity , Fluorine/chemistry , Microbial Sensitivity Tests , Pseudomonas aeruginosa/drug effects , Pseudomonas aeruginosa/growth & development , Pseudomonas aeruginosa/pathogenicity , Sporothrix/drug effects , Sporothrix/growth & development , Sporothrix/pathogenicity , Staphylococcus aureus/drug effects , Staphylococcus aureus/growth & development , Staphylococcus aureus/pathogenicity , Tetrazoles/chemical synthesis
17.
Arch Microbiol ; 197(6): 815-21, 2015 Aug.
Article in English | MEDLINE | ID: mdl-25983135

ABSTRACT

Bacterial reporter assays are powerful tools used to study the effect of different compounds that affect the physiology of cellular processes. Most bacterial reporters are luciferase based and can be monitored in real time. In the present study we designed and implemented two sets of Escherichia coli bacterial reporter assays, using a multicopy plasmid system. Each reporter strain was constructed using either green fluorescent protein or ß-galactosidase (LacZ) proteins. The designed reporter strains are capable of responding in a specific manner to molecules that either oxidative stress, or membrane, protein, or DNA damage. In order to respond to the desired stimulus, promoter sequences from E. coli were used. These sequences correspond to the promoter of the major catalase (KatG) activated with cellular oxidative damage, the promoter of the ß-hydroxydecanoyl-ACP dehydrase (FabA) which is activated with membrane perturbation, the promoter of DNA recombinase (RecA) which is activated by DNA lesions. For protein misfolding, the promoter of the heat-shock responsive chaperon (DnaK) was used. Our constructs displayed activation to damage from specific stimuli, and low response to nonspecific stimuli was detected. Our results suggest that these types of bacterial reporter strains can be used in semiquantitative (fluorometric) and qualitative (ß-galactosidase activity) studies of different xenobiotic substances and pollutants.


Subject(s)
Biosensing Techniques , Colorimetry/methods , Escherichia coli , Green Fluorescent Proteins , Plasmids , Base Sequence , DNA Damage/physiology , Escherichia coli/genetics , Escherichia coli/metabolism , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Oxidative Stress/physiology , Promoter Regions, Genetic , beta-Galactosidase/genetics , beta-Galactosidase/metabolism
18.
Nefrología (Madr.) ; 31(4): 471-483, jul.-ago. 2011. ilus, tab
Article in Spanish | IBECS | ID: ibc-103228

ABSTRACT

Introducción: Durante la hospitalización de pacientes en hemodiálisis crónica se produce un deterioro nutricional de origen multifactorial y que guarda relación con la duración de la estancia hospitalaria. El objetivo del estudio fue analizar si las patologías relacionadas con el ingreso influyen en el grado de deterioro nutricional sufrido durante el ingreso hospitalario. Pacientes y métodos: Seleccionamos retrospectivamente ingresos hospitalarios de pacientes en hemodiálisis crónica durante más de tres meses con una estancia superior a cuatro días, excluyendo aquellos casos que fallecieron en el hospital. Se eligió aleatoriamente un solo episodio de ingreso por paciente para evitar el peso excesivo de ingresos reiterados. Se recogieron cambios de peso, analítica preingreso y postingreso, analítica en primera semana de hospitalización, patologías causantes del ingreso y las aparecidas durante éste. Se construyó una puntuación para recoger el total de enfermedades presentadas. Resultados: El estudio incluyó a 77 pacientes con 67 ± 12 años y 31 ± 34 meses en hemodiálisis. La estancia hospitalaria fue de 17,8 ± 12,6 días (mediana, 12 días). Al considerar la causa de ingreso observamos una pérdida de peso algo mayor en pacientes ingresados por patología digestiva, osteoarticular, insuficiencia cardíaca o síndrome coronario, aunque sin alcanzar diferencias significativas. El número total de patologías sufridas durante el ingreso fue independiente del motivo de ingreso. La anemización, las arritmias cardíacas y la presencia de insuficiencia cardíaca se asociaron con una mayor estancia hospitalaria, siendo sólo la anemización la que se relacionó de forma significativa con mayor pérdida de peso. No se relacionaron con la pérdida de peso la realización de cirugía o la presencia de infecciones. La albúmina en la primera semana de hospitalización fue diferente según la patología del ingreso y fue más baja cuando ingresaron por patologías digestivas (ANOVA, p = 0,05). La variación de la albúmina y creatinina antes y después de la hospitalización no fue diferente según las patologías. Observamos una relación entre haber presentado un mayor número de patologías durante el ingreso con una mayor estancia, menor albúmina inicial y mayores pérdidas de peso tras el alta. Realizando análisis multivariante encontramos como predictores de la pérdida de peso la estancia, la anemización y la presencia de sepsis. Como predictores de la estancia encontramos el índice de comorbilidad de Charlson, la presencia de arritmia cardíaca, la anemización, la sepsis y la cirugía. Conclusiones: El deterioro nutricional durante la hospitalización depende de la duración de la estancia y del número de patologías sufridas durante el ingreso, influyendo menos el motivo de hospitalización. La albúmina se reduce de forma precoz en pacientes con ingresos que van a complicarse con un mayor número de patologías (AU)


Introduction: Hospitalised chronic haemodialysis patients often develop malnutrition due to many causes, which worsens throughout their hospital stay. The objective of the study is to analyse if the disorders related to hospitalisation influence the degree of malnutrition suffered during the hospital stay. Patients and Methods: Over a period of more than three months, we retrospectively chose chronic haemodialysis patients that were admitted for more than four days, excluding those cases that died in the hospital. We randomly chose one admission episode per patient so as to avoid excessive weighing of repeated admissions. We took data concerning weight changes, pre-admission and post-discharge analytical results, analytical results following first week of hospital stay, disorders causing hospital admission and those that developed during the hospital stay. We created a point score system to record the total of illnesses presented. Results: The study included 77 patients, aged 67±12 years and having undergone haemodialysis for 31±34 months. Hospital stay was 17.8±12.6 days (median, 12 days). We observed that many patients admitted for digestive and osteoarticular disorders, heart failure or coronary syndrome lost more weight during their hospital stay, although no significant differences were reached. The total number of disorders suffered during the hospital stay was independent of the cause of hospitalisation. Anaemia, heart arrhythmias and signs of heart failure were associated with longer hospital stays, however it was only anaemia that was significantly related to greater weight loss. Weight loss was not related to surgery or infections. Albumin levels during the first week of hospital stay were different depending on the disorder upon admission. It was lower when the patients were admitted for digestive disorders (ANOVA, P=.05). Changes in albumin and creatinine levels before and after the hospital stay did not differ among disorders. We observed a relationship between having presented with more disorders during the stay and a longer stay, lower initial albumin and greater weight loss following discharge. In the multivariate analysis, we found the following weight loss predictors: stay, anaemia, and sepsis. We also found the following hospital stay predictors: Charlson’s comorbidity index, heart arrhythmias, anaemia, sepsis and surgery. Conclusions: Malnutrition during the hospital stay depends on the duration and the number of disorders that develop during this time, the cause of admission having less impact on this. Albumin levels decrease earlier in patients that are going to develop more disorders during hospital stay (AU)


Subject(s)
Humans , Renal Insufficiency, Chronic/epidemiology , Renal Dialysis , Hospitalization/statistics & numerical data , Serum Albumin/analysis , Malnutrition/epidemiology , /statistics & numerical data
19.
Nefrologia ; 31(4): 471-83, 2011.
Article in English, Spanish | MEDLINE | ID: mdl-21738250

ABSTRACT

INTRODUCTION: Hospitalizations are frequent in hemodialysis patients and is often accompanied by nutritional deterioration showed by a loss of weight and a reduction of albumin serum levels. This phenomenon is related with length of stay having its origin in a complex interplay of factors. Our aim in this study was to analyze if changes in body weight and other nutritional parameters are influenced by the illnesses presented during hospitalization. PATIENTS AND METHODS: Over a period of three years, we retrospectively chose chronic haemodialysis patients that were admitted for more than four days, excluding those cases that died in the hospital. We randomly chose one admission episode per patient so as to avoid excessive weighing of repeated admissions. We took data concerning weight changes, pre-admission and post-discharge analytical results, analytical results following first week of hospital stay, disorders causing hospital admission and those that developed during the hospital stay. We created a point score system to record the total of illnesses presented. RESULTS: The study included 77 patients, aged 67±12 years and having undergone haemodialysis for 31±34 months. Hospital stay was 17.8±12.6 days (median, 12 days). We observed that many patients admitted for digestive and osteoarticular disorders, heart failure or coronary syndrome lost more weight during their hospital stay, although no significant differences were reached. The total number of disorders suffered during the hospital stay was independent of the cause of hospitalisation. Anaemia,heart arrhythmias and signs of heart failure were associated with longer hospital stays, however it was only anaemia that was significantly related to greater weight loss. Weight loss was not related to surgery or infections. Albumin levels during the first week of hospital stay were different depending on the disorder upon admission. It was lower when the patients were admitted for digestive disorders (ANOVA, P=.05). Changes in albumin and creatinine levels before and after the hospital stay did not differ among disorders. We observed a relationship between having presented with more disorders during the stay and a longer stay, lower initial albumin and greater weight loss following discharge. In the multivariate analysis, we found the following weight loss predictors: stay, anaemia, and sepsis. We also found the following hospital stay predictors:Charlson's comorbidity index, heart arrhythmias, anaemia, sepsis and surgery. CONCLUSIONS: Malnutrition during the hospital stay depends on the duration and the number of disorders that develop during this time, the cause of admission having less impact on this. Albumin levels decrease earlier in patients that are going to develop more disorders during hospital stay.


Subject(s)
Hospitalization , Kidney Failure, Chronic/complications , Malnutrition/etiology , Renal Dialysis , Adult , Aged , Aged, 80 and over , Anemia/complications , Anemia/epidemiology , Body Weight , Cardiovascular Diseases/complications , Cardiovascular Diseases/epidemiology , Comorbidity , Digestive System Diseases/complications , Digestive System Diseases/epidemiology , Female , Humans , Hypoalbuminemia/etiology , Infections/complications , Infections/epidemiology , Joint Diseases/complications , Joint Diseases/epidemiology , Kidney Failure, Chronic/therapy , Length of Stay/statistics & numerical data , Male , Malnutrition/blood , Malnutrition/epidemiology , Middle Aged , Retrospective Studies , Sampling Studies , Severity of Illness Index
20.
Nefrologia ; 30(5): 557-66, 2010.
Article in Spanish | MEDLINE | ID: mdl-20882095

ABSTRACT

BACKGROUND: It is frequent to observe that hemodialysis patients suffer important loss of weight during hospital stay. This issue has not been investigated previously. Our aim in this study was to analyze factors associated with this loss of weight and what changes occur after admission in biochemical parameters with nutritional interest. PATIENTS AND METHODS: We retrospectively selected patients undergoing chronic hemodialysis who were admitted at hospital for acute or chronic pathologies, with a minimum length of stay of 4 days, taking only one episode of admission per patient. We chose loss of weight observed at hospital discharge, at 2 and 4 weeks later and we also collected routine laboratory data and adequacy parameters before and after the hospital admission and basic biochemical parameters in the first week of hospital stay. RESULTS: We included 77 patients, with 67±12 years and 30±34 months in dialysis. Forty (51.9%) were female (51.9%) and 22 diabetics (28.6%). Length of stay was 17.8±12.6 days (median 12). There were 70.4% patients who suffered a loss of weight at discharge and 81.4% at 4 weeks, without differences in sex or diabetes. Weight decreased significantly with a mean of -1.09 kg (95%CI -0.73 to -1.44). After 2 weeks the loss of weight was -1.64 kg (95%CI -1.21 a -2.07 kg) and after 4 weeks was -1.94 kg (95%CI -1.47 a -2.42 kg). Comparing parameters before and after admission, we observed a significantly decrease in serum urea levels (before 134±40 vs after 119±36 mg/dl; p= 0.001), creatinine (before 8.1±2.6 vs after 7.5±2.6 mg/dl; p < 0.001), phosphate (before 5.2±1.7 vs after 4.3±1.5 mg/dl; p < 0.001) and albumin (before 3.70±0.48 vs after 3.56±0.58 g/dl; p=0.05), without changes in adequacy parameters. Greater loss of weight at 4 weeks from discharge was correlated with larger length of stay (r= 0.41; p < 0.001), greater body mass index at admission (r= -0.23; p=0.05) and lower serum albumin at admission (r= 0.39; p= 0.012). It was also correlated with a lower serum albumin (r= 0.27; p=0.05), lower creatinine (r= 0.30; p= 0.02) and lower protein intake (nPNA) (r= 0.47; p= 0.002) after discharge. Lower serum albumin levels at admission were correlated with greater decreases of creatinine after discharge (r= 0.42; p= 0.009) and larger length of stay (r= -0.61; p < 0.001). Employing multivariate analysis we found that loss of weight was associated to length of stay and serum potassium levels before admission. CONCLUSIONS: Hospitalization of hemodialysis patients have a negative nutritional impact causing a significant loss of weight, probably reflecting a reduction of muscle mass. We found that length of stay in hospital is a basic factor associated with this nutritional impairment. The pathologies promoting hospitalization could influence this derangement through inflammation but this hypothesis should be investigated.


Subject(s)
Hospitalization , Inflammation/complications , Kidney Failure, Chronic/therapy , Renal Dialysis , Weight Loss , Adult , Aged , Aged, 80 and over , Comorbidity , Creatinine/blood , Diabetic Nephropathies/blood , Diabetic Nephropathies/complications , Female , Humans , Kidney Failure, Chronic/blood , Kidney Failure, Chronic/complications , Length of Stay , Male , Middle Aged , Phosphorus/blood , Retrospective Studies , Risk Factors , Serum Albumin/analysis , Urea/blood
SELECTION OF CITATIONS
SEARCH DETAIL
...