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1.
Dokl Biochem Biophys ; 507(1): 237-241, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36580213

ABSTRACT

The aim of this work was to design and characterize peptides based on the α-helices h1 and h2 of the ACE2 receptor, forming the interaction interface between the receptor-binding domain (RBD) of the SARS-CoV-2 S protein and the cellular ACE2 receptor. Monomeric and heterodimeric peptides connected by disulfide bonds at different positions were synthesized. Solubility, RBD-binding affinity, and peptide helicity were experimentally measured, and molecular dynamics simulation was performed in various solvents. It was established that the preservation of the helical conformation is a necessary condition for the binding of peptides to RBD. The peptides have a low degree of helicity and low affinity for RBD in water. Dimeric peptides have a higher degree of helicity than monomeric ones, probably due to the mutual influence of helices. The degree of helicity of the peptides in trifluoroethanol is the highest; however, for in vitro studies, the most suitable solvent is a water-ethanol mixture.


Subject(s)
Angiotensin-Converting Enzyme 2 , COVID-19 , Humans , Molecular Dynamics Simulation , Peptides , Protein Binding , SARS-CoV-2
2.
Mol Biol (Mosk) ; 45(3): 510-6, 2011.
Article in Russian | MEDLINE | ID: mdl-21790013

ABSTRACT

A system for production of human interferon-alpha2a (IFN-alpha2a) and IFN-alpha2b lacking N-terminal methionine has been developed. Plasmids containing genes of hybrid IFN-alpha2 under the control of different promoters were constructed; a sequence encoding the enteropeptidase hydrolysis site being introduced in proximal part of the genes. As the result, 4 strains of Escherichia coli producing hybrid IFN-alpha2 have been obtained. The methodology for IFN-alpha2 renaturation, hydrolysis of its N-terminal part, chromatographic purification of N-terminal methionine-free IFN-alpha2 has been developed.


Subject(s)
Enteropeptidase/chemistry , Industrial Microbiology/methods , Interferon-alpha/chemistry , Interferon-alpha/isolation & purification , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/isolation & purification , Escherichia coli/enzymology , Escherichia coli/genetics , Genetic Vectors/genetics , Humans , Interferon alpha-2 , Interferon-alpha/biosynthesis , Methionine/chemistry , Plasmids/genetics , Protein Renaturation , Recombinant Fusion Proteins/biosynthesis , Recombinant Proteins
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