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Hum Immunol ; 82(4): 247-254, 2021 Apr.
Article in English | MEDLINE | ID: mdl-33546902

ABSTRACT

Immunorelevant genes are among the most probable modulators of coronavirus disease 2019 (COVID-19) progression and prognosis. However, in the few months of the pandemic, data generated on host genetics has been scarce. The present study retrieved data sets of HLA-B alleles, KIR genes and functional single nucleotide polymorphisms (SNPs) in cytokines related to COVID-19 cytokine storm from two publicly available databases: Allele Frequency Net Database and Ensembl, and correlated these frequency data with Case Fatality Rate (CFR) and Daily Death Rates (DDR) across countries. Correlations of eight HLA-B alleles and polymorphisms in three cytokine genes (IL6, IL10, and IL12B) were observed and were mainly associated with DDR. Additionally, HLA-B correlations suggest that differences in allele affinities to SARS-CoV-2 peptides are also associated with DDR. These results may provide rationale for future host genetic marker surveys on COVID-19.


Subject(s)
COVID-19/pathology , Cytokines/genetics , HLA-B Antigens/genetics , Receptors, KIR/genetics , SARS-CoV-2/immunology , COVID-19/immunology , COVID-19/mortality , Cytokine Release Syndrome/immunology , Cytokine Release Syndrome/pathology , Gene Frequency/genetics , Genetic Markers/genetics , Humans , Interleukin-10/genetics , Interleukin-12 Subunit p40/genetics , Interleukin-6/genetics , Polymorphism, Single Nucleotide/genetics
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