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1.
Hum Reprod Open ; 2018(3): hoy010, 2018.
Article in English | MEDLINE | ID: mdl-30895251

ABSTRACT

STUDY QUESTION: Can maternal and offspring high-fat diet (HFD)-induced changes in mRNA expression levels in mice be ameliorated by interventions in female offspring? SUMMARY ANSWER: Our results indicate that exercise and nicotinamide mononucleotide (NMN) can ameliorate the negative effects of maternal and post-weaning HFD in female offspring. WHAT IS KNOWN ALREADY: Maternal and post-weaning HFD can perturb offspring developmental trajectories. As rates of maternal obesity are rising globally, there is a need for effective treatments in offspring to ameliorate the negative effects from a maternal obesogenic environment. Modulation of the nicotinamide adenine dinucleotide (NAD+) pathway by exercise and the NAD+ precursor NMN has previously been shown to reduce the effects of obesity. STUDY DESIGN SIZE DURATION: This study consisted of a multigenerational study using C57Bl6 mice. Mice were fed a control (chow) or HFD ad libitum throughout mating, pregnancy and lactation (n = 13-25). Female offspring (n = 72) were then also supplied either a chow or HFD post-weaning. At 9 weeks of age offspring from HFD dams were subjected to exercise on a treadmill for 9 weeks or at 16 weeks of age administered NMN (i.p.) for 2.5 weeks. At 18.5 weeks mice were euthanized and ovaries and cumulus-oocyte complexes (COC) were collected to examine the possibility of ameliorating the negative effects of maternal and post-weaning HFD. PARTICIPANTS/MATERIALS SETTING METHODS: Ovary and COC mRNA expression was analysed using RT-qPCR. An initial screen of candidate genes was developed to test which molecular pathways may be involved in generating adverse reproductive system effects. For histological analysis, ovarian tissue was fixed in paraformaldehyde and embedded in paraffin and stained with haematoxylin and eosin. The numbers of primordial, primary, secondary and antral follicles were counted. MAIN RESULTS AND THE ROLE OF CHANCE: In the offspring's COC, maternal obesity increased both growth differentiation factor 9 (Gdf9: 2-fold; P < 0.05, HFD versus chow) and bone morphogenetic protein 15 (Bmp15: 4-fold; P < 0.05, HFD versus chow) mRNA expression levels while exercise and NMN interventions did not regulate Gdf9 and Bmp15 in the same manner. In whole ovary, maternal diet programmed a 25-50% reduction in FSH receptor and sirtuin-3 mRNA expression levels in daughter ovaries (P < 0.05, HFD versus chow). There was a significant interaction between HFD and intervention on the proportion of large preantral and preovulatory follicles (P < 0.05). However, the increase in preovulatory follicles did not translate to increased oocyte yield. NMN administration resulted in reduced body weight in HFD-fed individuals. LIMITATIONS REASONS FOR CAUTION: It is unclear if the changes in oocyte mRNA expression levels reported here will impact oocyte quality and fertility in offspring. Offspring ovulation rate or fecundity could not be studied here and fertility trials are required to determine if the changes in gene expression do reduce fertility. WIDER IMPLICATIONS OF THE FINDINGS: Our results demonstrate that maternal and offspring HFD perturbs key signalling pathways that are known to regulate fertility in mice, highlighting the importance of interventions in helping to prevent the declining rates of fertility in the context of the current obesity epidemic. STUDY FUNDING/COMPETING INTERESTS: This work was supported by grants and fellowships from the National Health and Medical Research Council to R.B.G. (APP1023210, APP1062762, APP1117538) and to M.J.M. and D.A.S. (APP1044295). DAS is a consultant to and inventor on patents licenced to Ovascience, Metrobiotech and GlaxoSmithKline. The other authors declare that there is no conflict of interest.

2.
Oncogene ; 36(4): 559-569, 2017 01 26.
Article in English | MEDLINE | ID: mdl-27345396

ABSTRACT

Tumors utilize aerobic glycolysis to support growth and invasion. However, the molecular mechanisms that link metabolism with invasion are not well understood. The nutrient sensor O-linked-ß-N-acetylglucosamine (O-GlcNAc) transferase (OGT) modifies intracellular proteins with N-acetylglucosamine. Cancers display elevated O-GlcNAcylation and suppression of O-GlcNAcylation inhibits cancer invasion and metastasis. Here, we show that the regulation of cancer invasion by OGT is dependent on the NAD+-dependent deacetylase SIRT1. Reducing O-GlcNAcylation elevates SIRT1 levels and activity in an AMPK (AMP-activated protein kinase α)-dependent manner. Reduced O-GlcNAcylation in cancer cells leads to SIRT1-mediated proteasomal degradation of oncogenic transcription factor FOXM1 in an MEK/ERK-dependent manner. SIRT1 is critical for OGT-mediated regulation of FOXM1 ubiquitination and reducing SIRT1 activity reverses OGT-mediated regulation of FOXM1. Moreover, we show that SIRT1 levels are required for OGT-mediated regulation of invasion and metastasis in breast cancer cells. Thus, O-GlcNAcylation is a central component linking metabolism to invasion and metastasis via an SIRT1/ERK/FOXM1 axis.


Subject(s)
Breast Neoplasms/metabolism , Forkhead Box Protein M1/metabolism , N-Acetylglucosaminyltransferases/metabolism , Sirtuin 1/metabolism , Animals , Breast Neoplasms/genetics , Breast Neoplasms/pathology , Cell Line, Tumor , Cell Proliferation/physiology , Female , Forkhead Box Protein M1/genetics , Glycosylation , Heterografts , Humans , MCF-7 Cells , Mice , Mice, Inbred NOD , Neoplasm Metastasis , Sirtuin 1/genetics
3.
Methods Enzymol ; 574: 213-244, 2016.
Article in English | MEDLINE | ID: mdl-27423864

ABSTRACT

The NAD(+)-dependent deacetylase SIRT1 plays key roles in numerous cellular processes including DNA repair, gene transcription, cell differentiation, and metabolism. Overexpression of SIRT1 protects against a number of age-related diseases including diabetes, cancer, and Alzheimer's disease. Moreover, overexpression of SIRT1 in the murine brain extends lifespan. A number of small-molecule sirtuin-activating compounds (STACs) that increase SIRT1 activity in vitro and in cells have been developed. While the mechanism for how these compounds act on SIRT1 was once controversial, it is becoming increasingly clear that they directly interact with SIRT1 and enhance its activity through an allosteric mechanism. Here, we present detailed chemical syntheses for four STACs, each from a distinct structural class. Also, we provide a general protocol for purifying active SIRT1 enzyme and outline two complementary enzymatic assays for characterizing the effects of STACs and similar compounds on SIRT1 activity.


Subject(s)
Enzyme Activators/chemistry , Enzyme Activators/pharmacology , Enzyme Assays/methods , Sirtuin 1/metabolism , Small Molecule Libraries/chemistry , Small Molecule Libraries/pharmacology , Allosteric Regulation/drug effects , Animals , Drug Evaluation, Preclinical/methods , Enzyme Activation/drug effects , Enzyme Activators/chemical synthesis , Humans , Small Molecule Libraries/chemical synthesis
4.
Br J Surg ; 102(1): 37-44, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25332065

ABSTRACT

BACKGROUND: Mental practice, the cognitive rehearsal of a task without physical movement, is known to enhance performance in sports and music. Investigation of this technique in surgery has been limited to basic operations. The purpose of this study was to develop mental practice scripts, and to assess their effect on advanced laparoscopic skills and surgeon stress levels in a crisis scenario. METHODS: Twenty senior surgical trainees were randomized to either conventional training or mental practice groups, the latter being trained by an expert performance psychologist. Participants' skills were assessed while performing a porcine laparoscopic jejunojejunostomy as part of a crisis scenario in a simulated operating room, using the Objective Structured Assessment of Technical Skill (OSATS) and bariatric OSATS (BOSATS) instruments. Objective and subjective stress parameters were measured, as well as non-technical skills using the Non-Technical Skills for Surgeons rating tool. RESULTS: An improvement in OSATS (P = 0.003) and BOSATS (P = 0.003) scores was seen in the mental practice group compared with the conventional training group. Seven of ten trainees improved their technical performance during the crisis scenario, whereas four of the ten conventionally trained participants deteriorated. Mental imagery ability improved significantly following mental practice training (P = 0.011), but not in the conventional group (P = 0.083). No differences in objective or subjective stress levels or non-technical skills were evident. CONCLUSION: Mental practice improves technical performance for advanced laparoscopic tasks in the simulated operating room, and allows trainees to maintain or improve their performance despite added stress.


Subject(s)
Clinical Competence/standards , Education, Medical, Graduate/methods , Laparoscopy/standards , Practice, Psychological , Specialties, Surgical/education , Anastomosis, Roux-en-Y/education , Female , Functional Laterality , Humans , Jejunostomy/education , Laparoscopy/education , Male
5.
Hum Mol Genet ; 22(20): 4053-63, 2013 Oct 15.
Article in English | MEDLINE | ID: mdl-23727838

ABSTRACT

Human cortical malformations, including lissencephaly, polymicrogyria and other diseases of neurodevelopment, have been associated with mutations in microtubule subunits and microtubule-associated proteins. Here we report our cloning of the brain dimple (brdp) mouse mutation, which we recovered from an ENU screen for recessive perinatal phenotypes affecting neurodevelopment. We identify the causal mutation in the tubulin, beta-2b (Tubb2b) gene as a missense mutation at a highly conserved residue (N247S). Brdp/brdp homozygous mutants have significant thinning of the cortical epithelium, which is markedly more severe in the caudo-lateral portion of the telencephalon, and do not survive past birth. The cortical defects are largely due to a major increase in apoptosis and we note abnormal proliferation of the basal progenitors. Adult brdp/+ mice are viable and fertile but exhibit behavioral phenotypes. This allele of Tubb2b represents the most severely affected mouse tubulin phenotype reported to date and this is the first report of a tubulin mutation affecting neuronal proliferation and survival.


Subject(s)
Cerebral Cortex/abnormalities , Genes, Lethal , Malformations of Cortical Development/genetics , Malformations of Cortical Development/pathology , Mutation, Missense , Tubulin/genetics , Animals , Brain/abnormalities , Brain/embryology , Brain/metabolism , Cell Proliferation , Cell Survival , Cerebral Cortex/embryology , Cerebral Cortex/metabolism , Cloning, Molecular , Evolution, Molecular , Female , Humans , Male , Mice , Models, Molecular , Molecular Sequence Data , NIH 3T3 Cells , Neurons/physiology , Phenotype , Protein Conformation , Sequence Alignment , Tubulin/chemistry
6.
Zoonoses Public Health ; 59(8): 561-7, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22639928

ABSTRACT

Investigation was undertaken to assess the occurrence of zoonotic infection among staff at Auckland Zoological Park, New Zealand, in 1991, 2002 and 2010. Serial cross-sectional health surveys in 1991, 2002 and 2010 comprising a health questionnaire, and serological, immunological and microbiological analysis for a range of potential zoonotic infections were performed. Laboratory results for zoo animals were also reviewed for 2004-2010 to assess the occurrence of potential zoonotic infections. Veterinary clinic, animal handler, grounds, maintenance and administrative staff participated in the surveys, with 49, 42 and 46 participants in the 1991, 2002 and 2010 surveys, respectively (29% of total zoo staff in 2010). A small number of staff reported work-related infections, including erysipelas (1), giardiasis (1) and campylobacteriosis (1). The seroprevalence of antibodies to hepatitis A virus and Toxoplasma gondii closely reflected those in the Auckland community. No carriage of hepatitis B virus (HBV) was detected, and most of those with anti-HBV antibodies had been vaccinated. Few staff had serological evidence of past leptospiral infection. Three veterinary clinic staff had raised Chlamydophila psittaci antibodies, all < 1 : 160 indicating past exposure. Two staff (in 1991) had asymptomatic carriage of Giardia lamblia and one person (in 2010) had a dermatophyte infection. After 1991, positive tests indicating exposure to Mycobacterium tuberculosis were < 10%, comparable to the general New Zealand population. Zoo animals had infections with potential zoonotic agents, including G. lamblia, Salmonella spp., Campylobacter spp. and T. gondii, although the occurrence was low. Zoonotic agents pose an occupational risk to zoo workers. While there was evidence of some zoonotic transmission at Auckland Zoo, this was uncommon and risks appear to be adequately managed under current policies and procedures. Nevertheless, ongoing assessment of risk factors is needed as environmental, human and animal disease and management factors change. Policies and procedures should be reviewed periodically in conjunction with disease monitoring results for both animals and staff to minimise zoonotic transmission.


Subject(s)
Bacterial Infections/epidemiology , Occupational Diseases/epidemiology , Parasitic Diseases/epidemiology , Virus Diseases/epidemiology , Zoonoses/epidemiology , Animals , Animals, Zoo , Antibodies, Bacterial/blood , Antibodies, Protozoan/blood , Antibodies, Viral/blood , Bacterial Infections/microbiology , Bacterial Infections/parasitology , Bacterial Infections/transmission , Cross-Sectional Studies , Feces/microbiology , Female , Humans , Male , New Zealand/epidemiology , Occupational Diseases/microbiology , Occupational Diseases/parasitology , Occupational Exposure , Occupational Health , Parasitic Diseases/microbiology , Parasitic Diseases/parasitology , Parasitic Diseases/transmission , Risk Factors , Seroepidemiologic Studies , Surveys and Questionnaires , Virus Diseases/microbiology , Virus Diseases/parasitology , Virus Diseases/transmission , Zoonoses/microbiology , Zoonoses/parasitology , Zoonoses/transmission
7.
Cell Death Differ ; 14(12): 2058-67, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17885668

ABSTRACT

Polyglutamine (polyQ) diseases, such as Huntington's disease and Machado-Joseph disease (MJD), are caused by gain of toxic function of abnormally expanded polyQ tracts. Here, we show that expanded polyQ of ataxin-3 (Q79C), a gene that causes MJD, stimulates Ku70 acetylation, which in turn dissociates the proapoptotic protein Bax from Ku70, thereby promoting Bax activation and subsequent cell death. The Q79C-induced cell death was significantly blocked by Ku70 or Bax-inhibiting peptides (BIPs) designed from Ku70. Furthermore, expression of SIRT1 deacetylase and the addition of a SIRT1 agonist, resveratrol, reduced Q79C toxicity. In contrast, mimicking acetylation of Ku70 abolished the ability of Ku70 to suppress Q79C toxicity. These results indicate that Bax and Ku70 acetylation play important roles in Q79C-induced cell death, and that BIP may be useful in the development of therapeutics for polyQ diseases.


Subject(s)
Antigens, Nuclear/metabolism , Cytoprotection/drug effects , DNA-Binding Proteins/metabolism , Peptides/pharmacology , bcl-2-Associated X Protein/antagonists & inhibitors , Acetylation/drug effects , Animals , Caspases/metabolism , Cell Death/drug effects , Cell Line , Cyclic AMP Response Element-Binding Protein/metabolism , DNA Fragmentation/drug effects , Histone Acetyltransferases/metabolism , Humans , Ku Autoantigen , Mutant Proteins/metabolism , Peptides/toxicity , Protein Binding/drug effects , Protein Conformation/drug effects , Rats , Rats, Sprague-Dawley , Resveratrol , Stilbenes/pharmacology , Vacuoles/drug effects , Vacuoles/metabolism
8.
Genome ; 48(4): 571-84, 2005 Aug.
Article in English | MEDLINE | ID: mdl-16094423

ABSTRACT

In this review, we combine the results of our published and unpublished work with the published results of other laboratories to provide an updated map of the centromeric heterochromatin of chromosome 3 in Drosophila melanogaster. To date, we can identify more than 20 genes (defined DNA sequences with well-characterized functions and (or) defined genetic complementation groups), including at least 16 essential loci. With the ongoing emergence of data from genetic, cytological, and genome sequencing studies, we anticipate continued, substantial progress towards understanding the function, structure, and evolution of centric heterochromatin.


Subject(s)
Chromosomes/genetics , Drosophila melanogaster/genetics , Heterochromatin/genetics , Animals , Centromere/genetics , Chromosome Mapping , Genes, Insect/genetics
9.
Genome ; 45(2): 296-312, 2002 Apr.
Article in English | MEDLINE | ID: mdl-11962627

ABSTRACT

The white gene encodes an ABC-type transmembrane transporter that has a role in normal eye pigment deposition. In addition, overexpression in Drosophila leads to homosexual male courtship. Its human homologue has been implicated in cholesterol transport in macrophages and in mood disorders in human males. The garnet gene is a member of a group of other Drosophila eye colour genes that have been shown, or proposed, to function in intracellular protein transport. Recent molecular analysis indicates that it encodes the delta subunit of the AP-3 adaptin complex involved in vesicle transport from the trans-Golgi network to lysosomes and related organelles, such as pigment granules. This identification revealed a novel role for intracellular vesicular transport in Drosophila pigmentation. To further analyze this intracellular transport system, we examined the genetic interactions between garnet and a second site enhancer mutation, enhancer of garnet (e(g)). We show here that e(g) is a cryptic allele of the white gene. The white-garnet interaction is highly sensitive to the levels of both gene products but also shows some allele specificity for the white gene. The additive effect on pigmentation and the predicted protein products of these genes suggest that the garnet/AP-3 transport system ensures the correct intracellular localization of the white gene product. This model is further supported by the observation of homosexual male courtship behavior in garnet mutants, similar to that seen in flies overexpressing, and presumably mis-sorting, the white gene product. The w(e(g)) allele also enhances mutations in the subset of other eye-color genes with phenotypes similar to garnet. This observation supports a role for these genes in intracellular transport and leads to a model whereby incorrect sorting of the white gene product can explain the pigmentation phenotypes of an entire group of eye-color genes.


Subject(s)
Adaptor Protein Complex 3 , Adaptor Protein Complex delta Subunits , Drosophila Proteins/genetics , Drosophila/genetics , Enhancer Elements, Genetic , Eye Proteins/genetics , Insect Proteins/genetics , Transcription Factors/genetics , ATP-Binding Cassette Transporters/genetics , Alleles , Animals , Chromosomes , Crosses, Genetic , Drosophila/metabolism , Drosophila Proteins/metabolism , Eye Color/genetics , Eye Proteins/metabolism , Eye Proteins/physiology , Female , Gene Deletion , Gene Dosage , Genes, Insect , Genotype , Male , Models, Biological , Phenotype , Protein Transport , Restriction Mapping , Sexual Behavior, Animal , Transgenes
10.
Mol Gen Genet ; 264(6): 782-9, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11254125

ABSTRACT

We have further characterized essential loci within the centric heterochromatin of the left arm of chromosome 3 (3L) of Drosophila melanogaster, using EMS, radiation and P element mutagenesis. We failed to find any new essential genes, a result that suggests a lower-than-average gene density in this region. Mutations affecting expression of the most proximal gene [lethal 1, l1 or l(3)80Fj] act as dominant suppressors of Polycomb (Pc), behavior which is consistent with a putative trithorax group (trx-G) gene. The third gene to the left of the centromere [lethal 3, l3 or l(3)80Fh] is likely to correspond to verthandi (vtd), a known trx-G gene that plays a role in the regulation of hedgehog (hh) expression and signalling. The intervening gene [lethal 2, l2 or l(3)80Fi] is required throughout development, and mutant alleles have interesting phenotypes; in various allelic combinations that survive, we observe fertility, bristle, wing, eye and cuticle defects.


Subject(s)
Chromosome Mapping , Drosophila Proteins , Drosophila melanogaster/genetics , Genes, Essential , Heterochromatin/genetics , Insect Proteins/genetics , Animals , Crosses, Genetic , Drosophila melanogaster/anatomy & histology , Drosophila melanogaster/growth & development , Female , Genetic Markers , Male , Mutagenesis, Insertional , Phenotype , Polycomb Repressive Complex 1 , Repressor Proteins/genetics , Suppression, Genetic , Wings, Animal/anatomy & histology
11.
Proc Natl Acad Sci U S A ; 98(6): 3174-9, 2001 Mar 13.
Article in English | MEDLINE | ID: mdl-11248051

ABSTRACT

The Saccharomyces cerevisiae SGS1 gene encodes a RecQ-like DNA helicase, human homologues of which are implicated in the genetic instability disorders, Bloom syndrome (BS), Rothmund-Thomson syndrome (RTS), and Werner syndrome (WS). Telomerase-negative yeast cells can recover from senescence via two recombinational telomere elongation pathways. The "type I" pathway generates telomeres with large blocks of telomeric and subtelomeric sequences and short terminal repeat tracts. The "type II" pathway generates telomeres with extremely long heterogeneous terminal repeat tracts, reminiscent of the long telomeres observed in telomerase-deficient human tumors and tumor-derived cell lines. Here, we report that telomerase-negative (est2) yeast cells lacking SGS1 senesced more rapidly, experienced a higher rate of telomere erosion, and were delayed in the generation of survivors. The est2 sgs1 survivors that were generated grew poorly, arrested in G(2)/M and possessed exclusively type I telomeres, implying that SGS1 is critical for the type II pathway. The mouse WS gene suppressed the slow growth and G(2)/M arrest phenotype of est2 sgs1 survivors, arguing that the telomeric function of SGS1 is conserved. Reintroduction of SGS1 into est2 sgs1 survivors restored growth rate and extended terminal tracts by approximately 300 bp. Both phenotypes were absolutely dependent on Sgs1 helicase activity. Introduction of an sgs1 carboxyl-terminal truncation allele with helicase activity restored growth rate without extending telomeres in most cases, demonstrating that type II telomeres are not necessary for normal growth in the absence of telomerase.


Subject(s)
DNA Helicases/metabolism , Recombination, Genetic , Telomerase/physiology , Telomere/genetics , Animals , DNA Helicases/genetics , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Exodeoxyribonucleases , Fungal Proteins/genetics , Fungal Proteins/metabolism , Mice , Rad52 DNA Repair and Recombination Protein , RecQ Helicases , Repetitive Sequences, Nucleic Acid , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins , Telomerase/genetics , Werner Syndrome , Werner Syndrome Helicase
12.
Gene ; 247(1-2): 167-73, 2000 Apr 18.
Article in English | MEDLINE | ID: mdl-10773456

ABSTRACT

We report here on the cloning and characterization of a new theta-class glutathione-S-transferase (GST) gene, gst-3, from Drosophila melanogaster. Its sequence is distinct from previously characterized Drosophila GST genes, and Southern blotting shows no other closely related genes in the genome. In-situ hybridization localizes the gene to chromosome 2 (55D), near gst-2 (53F), and clearly separate from the gst-D cluster at 87B. The gene is intronless and appears to possess conventional 5' TATA, Cap and 3' polyadenylation signals. A single transcript, approximately 1kb in size, appears to be expressed at high levels in all developmental stages examined. When this gene is overexpressed using various upstream GAL4 driver systems, no striking phenotypes are observed; however, we detect bristle morphology defects in some progeny. The gst-3 gene does not appear to be essential, based upon our observation that mutant flies homozygous for an EP element insertion 5' to the TATA box produce little or no detectable gst-3 mRNA; these flies are viable and fertile at 25 and 29 degrees C. Nevertheless, the gst-3 gene appears to be evolutionarily conserved in other Drosophila species, suggesting that it may be functionally important.


Subject(s)
Drosophila melanogaster/genetics , Glutathione Transferase/genetics , Amino Acid Sequence , Animals , Base Sequence , Blotting, Northern , Cloning, Molecular , DNA/chemistry , DNA/genetics , Drosophila/enzymology , Drosophila/genetics , Drosophila Proteins , Drosophila melanogaster/enzymology , Drosophila melanogaster/growth & development , Embryo, Nonmammalian/enzymology , Embryonic Development , Gene Expression Regulation, Developmental , In Situ Hybridization , Isoenzymes/genetics , Molecular Sequence Data , RNA, Messenger/genetics , RNA, Messenger/metabolism , Sequence Analysis, DNA
13.
Genetica ; 109(1-2): 9-18, 2000.
Article in English | MEDLINE | ID: mdl-11293800

ABSTRACT

We are taking two approaches to understanding the structure, function and regulation of essential genes within Drosophila heterochromatin. In the first, we have undertaken a genetic and molecular characterization of essential genes within proximal 3L heterochromatin. The expression of such 'resident' genes within a heterochromatic environment is paradoxical and poorly understood, given that the same environment can inactivate euchromatic sequences (position effect variegation, or PEV). A second approach involves the study of the local chromosomal environment of heterochromatic (het) genes, as assayed both biochemically, and via the effects of genetic modifiers of PEV, the latter being putative components important for het gene expression. Our results to date suggest that the three most proximal genes in 3L heterochromatin have key roles in development, and indicate strong effects of combinations of genetic modifiers of PEV on het gene expression.


Subject(s)
Drosophila melanogaster/genetics , Genes, Essential , Heterochromatin/genetics , Animals , Chromosome Mapping , Gene Expression Regulation/genetics , Mutation
14.
Mol Gen Genet ; 261(4-5): 753-61, 1999 Jun.
Article in English | MEDLINE | ID: mdl-10394912

ABSTRACT

The protein products of Polycomb group (PcG) and trithorax group (trxG) genes are required for the maintenance of the transcriptionally repressed and active states, respectively, of the homeotic genes. Mutations in PcG genes produce gain-of-function (posterior) homeotic transformations, while mutations in trxG genes produce loss-of-function (anterior) homeotic transformations. Double mutant combinations between a PcG gene and a trxG gene suppress the homeotic transformations seen with either mutation alone, suggesting that PcG and trxG genes act antagonistically. The PcG gene Additional sex combs (Asx) is interesting because one mutant allele, AsxP1, causes both anterior and posterior homeotic transformations. AsxP1 and other Asx mutations were crossed to mutations in the PcG gene Polycomb (Pc) and the trxG gene trithorax (trx). Asx alleles enhance both PcG and trxG homeotic transformations, showing that Asx is required for both the activation and the repression of homeotic loci. Asx also shows strong allele-specific interactions with the PcG genes Pc and super sex combs (sxc). Together, these data indicate that there are functional interactions between Asx, Pc and sxc in vivo. ASX may interact with a PcG complex containing PC and SXC and mediate activation versus repression at target loci, perhaps by interacting directly with the TRX protein.


Subject(s)
Drosophila Proteins , Drosophila melanogaster/genetics , Gene Expression Regulation , Genes, Homeobox , Genes, Insect , Insect Proteins/genetics , Repressor Proteins/genetics , Alleles , Animals , Crosses, Genetic , Female , Homozygote , Insect Proteins/metabolism , Male , Mutation , Polycomb Repressive Complex 1 , Repressor Proteins/metabolism
15.
Cell ; 97(5): 609-20, 1999 May 28.
Article in English | MEDLINE | ID: mdl-10367890

ABSTRACT

The yeast Sir2/3/4p complex is found in abundance at telomeres, where it participates in the formation of silent heterochromatin and telomere maintenance. Here, we show that Sir3p is released from telomeres in response to DNA double-strand breaks (DSBs), binds to DSBs, and mediates their repair, independent of cell mating type. Sir3p relocalization is S phase specific and, importantly, requires the DNA damage checkpoint genes MEC1 and RAD9. MEC1 is a homolog of ATM, mutations in which cause ataxia telangiectasia (A-T), a disease characterized by various neurologic and immunologic abnormalities, a predisposition for cancer, and a cellular defect in repair of DSBs. This novel mode by which preformed DNA repair machinery is mobilized by DNA damage sensors may have implications for human diseases resulting from defective DSB repair.


Subject(s)
DNA Repair/genetics , Fungal Proteins/genetics , Fungal Proteins/metabolism , Histone Deacetylases , Plasmids , Protein Serine-Threonine Kinases , Saccharomyces cerevisiae Proteins , Saccharomyces cerevisiae/cytology , Saccharomyces cerevisiae/genetics , Silent Information Regulator Proteins, Saccharomyces cerevisiae , Telomere/genetics , Trans-Activators/metabolism , Ataxia Telangiectasia/genetics , Ataxia Telangiectasia Mutated Proteins , Cell Cycle Proteins/metabolism , Chromatin/genetics , Chromatin/radiation effects , DNA Damage , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Gamma Rays , Heterochromatin/genetics , Heterochromatin/radiation effects , Humans , Intracellular Signaling Peptides and Proteins , Proteins/genetics , Saccharomyces cerevisiae/radiation effects , Sirtuin 1 , Sirtuin 2 , Sirtuins , Telomere/radiation effects , Trans-Activators/genetics , Tumor Suppressor Proteins , Ultraviolet Rays
16.
Genetics ; 151(4): 1503-16, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10101173

ABSTRACT

Genomic imprinting is a phenomenon in which the expression of a gene or chromosomal region depends on the sex of the individual transmitting it. The term imprinting was first coined to describe parent-specific chromosome behavior in the dipteran insect Sciara and has since been described in many organisms, including other insects, plants, fish, and mammals. In this article we describe a mini-X chromosome in Drosophila melanogaster that shows genomic imprinting of at least three closely linked genes. The imprinting of these genes is observed as mosaic silencing when the genes are transmitted by the male parent, in contrast to essentially wild-type expression when the same genes are maternally transmitted. We show that the imprint is due to the sex of the parent rather than to a conventional maternal effect, differential mitotic instability of the mini-X chromosome, or an allele-specific effect. Finally, we have examined the effects of classical modifiers of position-effect variegation on the maintenance and the establishment of the imprint. Factors that modify position-effect variegation alter the somatic expression but not the establishment of the imprint. This suggests that chromatin structure is important in maintenance of the imprint, but a separate mechanism may be responsible for its initiation.


Subject(s)
Drosophila melanogaster/genetics , Genomic Imprinting , Alleles , Animals , Chromosomes/genetics , Crosses, Genetic , Drosophila melanogaster/anatomy & histology , Female , Gene Expression , Genes, Insect , Male , Phenotype , Sex Characteristics , Temperature
17.
J Biol Chem ; 274(15): 10523-32, 1999 Apr 09.
Article in English | MEDLINE | ID: mdl-10187845

ABSTRACT

Expression of yeast genes involved in one-carbon metabolism is controlled by glycine, by L-methionine, and by nitrogen sources. Here we report a novel control element containing a core CTTCTT motif mediating the glycine response, demonstrating that a protein binds this element, that binding is modulated by tetrahydrofolate, and that folate is required for the in vivo glycine response. In an heterologous CYC1 promoter the region needed for the glycine response of GCV2 (encoding the P-subunit of glycine decarboxylase) mediated repression that was relieved by glycine. It was also responsible for L-methionine control but not nitrogen repression. GCV1 and GCV3 have an homologous region in their promoters. The GCV1 region conferred a glycine response on an heterologous promoter acting as a repressor or activator depending on promoter context. A protein was identified that bound to the glycine regulatory regions of GCV1 and GCV2 only if the CTTCTT motif was intact. This protein protected a 17-base pair CATCN7CTTCTT region of GCV2 that is conserved between GCV1 and GCV2. Protein binding was increased by tetrahydrofolate, and use of a fol1 deletion mutant indicated the involvement of a folate in the in vivo glycine response. Tetrahydrofolate or a derivative may act as a ligand for the transcription factor controlling expression of one-carbon metabolism genes.


Subject(s)
Amino Acid Oxidoreductases/genetics , DNA, Fungal/metabolism , Gene Expression Regulation, Fungal , Glycine/physiology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Tetrahydrofolates/pharmacology , Amino Acid Oxidoreductases/metabolism , Aminomethyltransferase , Base Sequence , Carrier Proteins/genetics , DNA Footprinting , Glycine Dehydrogenase (Decarboxylating) , Hydroxymethyl and Formyl Transferases/metabolism , Molecular Sequence Data , Multienzyme Complexes/genetics , Protein Binding , Saccharomyces cerevisiae Proteins
19.
Cell Mol Life Sci ; 56(9-10): 807-16, 1999 Nov 30.
Article in English | MEDLINE | ID: mdl-11212340

ABSTRACT

The molecular mechanisms of aging are most fully understood for the budding yeast Saccharomyces cerevisiae. Recent advances in our understanding of aging in this organism have enabled researchers to answer some fundamental questions about the aging process. Is aging due to a multitude of 'mechanisms' or can there be a key few? Can we design single-gene mutations that will prolong life? Can we prolong life whilst maintaining health and fecundity? The various contributing factors to yeast longevity, uncovered thus far, fall into three classes: DNA metabolism, heterochromatin, and metabolic activity. However, these separate classes may actually represent different aspects of the same aging mechanism based on genome stability. This review examines the recent advances in our understanding of yeast aging and discusses their relevance, if any, to the human condition.


Subject(s)
Aging/physiology , Cellular Senescence/physiology , Saccharomyces cerevisiae/cytology , Aging/genetics , Cellular Senescence/genetics , DNA Helicases/genetics , DNA Helicases/metabolism , Gene Expression Regulation, Fungal , Gene Silencing , Genes, Fungal/genetics , Heterochromatin/genetics , Heterochromatin/metabolism , Humans , Longevity/genetics , Longevity/physiology , Mitosis , Reactive Oxygen Species/metabolism , Saccharomyces cerevisiae/enzymology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism
20.
Genome ; 42(6): 1183-93, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10659786

ABSTRACT

The garnet gene was one of the first genes to be identified in Drosophila melanogaster. Mutations in the garnet gene affect both of the biochemically distinct types of pigments in the eye and disrupt pigmentation of other organs. As an initial step in the analysis of this gene, we have analyzed the pigmentation defects in several of the garnet alleles. We have also cloned the gene and examined its expression in various tissues and at different stages of development. The garnet gene is expressed throughout development and in all tissues examined. Structurally related sequences can be detected in a variety of other eukaryotes. The predicted protein sequence of the garnet product resembles clathrin and nonclathrin adaptin proteins and is highly similar to the delta subunit of the newly isolated mammalian AP-3 adaptin complex, which is associated with the trans-Golgi network and endosomes. This suggests that garnet encodes a protein that acts in the intracellular sorting and trafficking of vesicles from the trans-Golgi network to endosomes, and related specialized organelles such as the pigment granule. This finding provides an explanation for the phenotype of garnet mutations and predicts that other Drosophila eye-colour genes will be a rich resource for the genetic dissection of intracellular vesicle transport.


Subject(s)
Adaptor Protein Complex 3 , Adaptor Protein Complex delta Subunits , Drosophila Proteins , Drosophila melanogaster/genetics , Eye Color/genetics , Eye Proteins , Genes, Insect , Insect Proteins/genetics , Alleles , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Crosses, Genetic , Humans , Male , Malpighian Tubules , Molecular Sequence Data , Mutation , Phenotype , Sequence Analysis, DNA , Testis , Tissue Distribution
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