ABSTRACT
Overcoming sex bias in preclinical research requires not only including animals of both sexes in the experiments, but also developing proper tools to handle such data. Recent work revealed sensitivity of diffusion-weighted MRI to glia morphological changes in response to inflammatory stimuli, opening up exciting possibilities to characterize inflammation in a variety of preclinical models of pathologies, the great majority of them available in mice. However, there are limited resources dedicated to mouse imaging, like those required for the data processing and analysis. To fill this gap, we build a mouse MRI template of both structural and diffusion contrasts, with anatomical annotation according to the Allen Mouse Brain Atlas, the most detailed public resource for mouse brain investigation. To achieve a standardized resource, we use a large cohort of animals in vivo, and include animals of both sexes. To prove the utility of this resource to integrate imaging and molecular data, we demonstrate significant association between the mean diffusivity from MRI and gene expression-based glia density. To demonstrate the need of equitable sex representation, we compared across sexes the warp fields needed to match a male-based template, and our template built with both sexes. Then, we use both templates for analysing mice imaging data obtained in animals of different ages, demonstrating that using a male-based template creates spurious significant sex effects, not present otherwise. All in all, our MouseX DW-ALLEN Atlas will be a widely useful resource getting us one step closer to equitable healthcare.
Subject(s)
Brain , Diffusion Magnetic Resonance Imaging , Animals , Female , Male , Mice , Diffusion Magnetic Resonance Imaging/methods , Brain/diagnostic imaging , Atlases as Topic , Sex Characteristics , Neuroglia , Mice, Inbred C57BLABSTRACT
BACKGROUND: Opportunity and challenges of the agriculture scenario of the next decades will face increasing demand for secure food through approaches able to minimize the input to cultivations. Large panels of tomato varieties represent a valuable resource of traits of interest under sustainable cultivation systems and for genome-wide association studies (GWAS). For mapping loci controlling the variation of agronomic, fruit quality, and root architecture traits, we used a heterogeneous set of 244 traditional and improved tomato accessions grown under organic field trials. Here we report comprehensive phenotyping and GWAS using over 37,300 SNPs obtained through double digest restriction-site associated DNA (dd-RADseq). RESULTS: A wide range of phenotypic diversity was observed in the studied collection, with highly significant differences encountered for most traits. A variable level of heritability was observed with values up to 69% for morphological traits while, among agronomic ones, fruit weight showed values above 80%. Genotype by environment analysis highlighted the strongest genotypic effect for aboveground traits compared to root architecture, suggesting that the hypogeal part of tomato plants has been a minor objective for breeding activities. GWAS was performed by a compressed mixed linear model leading to 59 significantly associated loci, allowing the identification of novel genes related to flower and fruit characteristics. Most genomic associations fell into the region surrounding SUN, OVATE, and MYB gene families. Six flower and fruit traits were associated with a single member of the SUN family (SLSUN31) on chromosome 11, in a region involved in the increase of fruit weight, locules number, and fruit fasciation. Furthermore, additional candidate genes for soluble solids content, fruit colour and shape were found near previously reported chromosomal regions, indicating the presence of synergic and multiple linked genes underlying the variation of these traits. CONCLUSIONS: Results of this study give new hints on the genetic basis of traits in underexplored germplasm grown under organic conditions, providing a framework for the development of markers linked to candidate genes of interest to be used in genomics-assisted breeding in tomato, in particular under low-input and organic cultivation conditions.
Subject(s)
Chromosome Mapping , Crops, Agricultural/genetics , Fruit/genetics , Genome-Wide Association Study , Plant Breeding , Plant Roots/genetics , Solanum lycopersicum/genetics , Genetic Variation , Genome, Plant , Genotype , Italy , Organic Agriculture , Phenotype , Quantitative Trait Loci , Spain , United StatesABSTRACT
The study of the diversity within and between major Solanaceae crops (pepper, tomato, eggplant) is of interest for the selection and development of balanced diets. We have measured thirty-six major fruit composition traits, encompassing sugars, organic acids, antioxidants and minerals, in a set of 10 accessions per crop for pepper, tomato and eggplant, grown under the same cultivation conditions. The aim was to evaluate the diversity within species and to provide an accurate comparison of fruit composition among species by reducing to a minimum the environmental effect. Pepper, tomato and eggplant had a clearly distinct composition profile. Pepper showed the highest average content in total sugars and organic acids. Fructose and glucose were the major sugar compounds in the three species, although in pepper and tomato sucrose was present only in trace amounts. Citric acid was the major organic acid in pepper and tomato, while in eggplant it was malic acid. Pepper and eggplant had the highest total antioxidant activity. Vitamin C content was much higher in pepper than in tomato and eggplant, while eggplant accumulated high concentrations of chlorogenic acid. Furthermore, eggplant was the species with higher content in most minerals, particularly for K, Mg and Cu, while pepper was the richest in Fe. Due to their complementary nutritional profiles, a combined regular consumption of the three vegetables would supply more than 20% of the Dietary Reference Intake of several of the analysed phytochemicals. The large diversity within each species is of interest for selecting varieties with better nutritional and organoleptic profiles, as well as for breeding new cultivars.
Subject(s)
Solanum lycopersicum , Solanum melongena , Fruit , Plant Breeding , VegetablesABSTRACT
The 'de penjar' tomato (Solanum lycopersicum L.) is a group of local varieties from the Spanish Mediterranean region carrying the alc mutation, which provides long shelf-life. Their evolution under low-input management practices has led to the selection of resilient genotypes to adverse conditions. Here we present the first evaluation on nutritional fruit composition of a collection of 44 varieties of 'de penjar' tomato under two N fertilization levels, provided by doses of manure equivalent to 162 kg N ha-1 in the high N treatment and 49 kg N ha-1 in the low N treatment. Twenty-seven fruit composition and quality traits, as well as plant yield and SPAD value, were evaluated. A large variation was observed, with lycopene being the composition trait with the highest relative range of variation (over 4-fold) under both N treatments, and significant differences among varieties were detected for all traits. While yield and most quality traits were not affected by the reduction in N fertilization, fruits from the low N treatment had, on average, higher values for hue (5.9%) and lower for fructose (-11.5%), glucose (-15.8%), and total sweetness index (-12.9%). In addition, lycopene and ß-carotene presented a strongly significant genotype × N input interaction. Local varieties had higher values than commercial varieties for traits related to the ratio of sweetness to acidity and for vitamin C, which reinforces the appreciation for their organoleptic and nutritional quality. Highest-yielding varieties under both conditions displayed wide variation in the composition and quality profiles, which may allow the selection of specific ideotypes with high quality under low N conditions. These results revealed the potential of 'de penjar' varieties as a genetic resource in breeding for low N inputs and improving the organoleptic and nutritional tomato fruit quality.
ABSTRACT
No disponible
Subject(s)
Humans , Male , Aged , Betacoronavirus/isolation & purification , Coronavirus Infections/complications , Infectious Encephalitis/etiology , Pneumonia, Viral/complications , Coronavirus Infections/drug therapy , Infectious Encephalitis/diagnostic imaging , Infectious Encephalitis/drug therapy , Language Disorders/etiology , Magnetic Resonance Imaging , Methylprednisolone/therapeutic use , Pneumonia, Viral/diagnosis , Coronavirus Infections/diagnosis , Psychomotor Agitation/etiologyABSTRACT
We report the results of transcranial ultrasound monitoring in three patients with intracranial arterial stenosis of the middle cerebral artery treated with the only drug-eluting balloon certificated for intracranial use in highly symptomatic intracranial arterial stenosis, ELUTAX "3" (AR Baltic Medical). We performed transcranial Doppler ultrasounds 24 h, 72 h, 10 days, 15 days and 30 days after the angioplasty, thereby measuring mean flow velocity (MFV) in the maximum stenosis area in patients with symptomatic steno-occlusive disease of the middle cerebral artery treated with ELUTAX "3". Two patients were treated during mechanical thrombectomy (MT) due to acute ischemic stroke and one patient was treated on elective basis due to symptomatic pre-occlusive stenosis, with recurrent transient ischemic attacks (TIAs) refractory to medical therapy. In Case 1, the first transcranial Doppler ultrasounds evidenced MFV of 348 cm/s, with progressive MFV reduction until 15 days post-treatment, with MFV of 177 cm/s. In Case 2, 24 h after angioplasty had an MFV of 258 cm/s, decreasing to 103 cm/s at 30 days. Case 3 had an MFV of 436 cm/s before angioplasty that immediately decreased after the procedure to 364 cm/s, with a final MFV of 260 cm/s at 30 days. We have recorded a progressive MFV reduction in intracranial arterial stenosis, with better outcomes in patients treated during MT. In our experience, the use of ELUTAX "3" for the treatment of symptomatic intracranial arterial stenosis achieves a progressive improvement of stenosis, evident in the first weeks, to a higher extent in cases of occlusive thrombosis. More studies are needed to provide more information about this device.
Subject(s)
Angioplasty, Balloon , Brain Ischemia , Drug-Eluting Stents , Pharmaceutical Preparations , Stroke , Blood Flow Velocity , Constriction, Pathologic/diagnostic imaging , Humans , Ultrasonography, Doppler, TranscranialSubject(s)
Collagen Type I/metabolism , Skin Diseases, Vascular/pathology , Telangiectasis/pathology , Aged, 80 and over , Biopsy, Needle , Elbow/pathology , Elbow/physiopathology , Female , Follow-Up Studies , Humans , Immunohistochemistry , Knee/pathology , Knee/physiopathology , Severity of Illness Index , Skin Diseases, Vascular/diagnosis , Telangiectasis/diagnosisSubject(s)
Collagen Type I/metabolism , Skin Diseases, Vascular/pathology , Telangiectasis/pathology , Aged , Biopsy, Needle , Elbow/pathology , Elbow/physiopathology , Female , Humans , Immunohistochemistry , Knee/pathology , Knee/physiopathology , Rare Diseases , Skin Diseases, Vascular/diagnosis , Telangiectasis/diagnosisABSTRACT
Long shelf-life tomato (Solanum lycopersicum) landraces, characterized by carrying the alc allele in the NOR.NAC locus, have been traditionally cultivated in the Mediterranean region. These materials are adapted to open field conditions under low input conditions. However, cultivation under greenhouse is expanding fueled by increasing demand of these traditional tomatoes. We hypothesize that the large diversity in the long shelf-life landraces and derived materials can be exploited for adaptation to these new cultivation conditions. We have evaluated 12 varieties (seven landraces, three selections and two hybrids) carrying the alc mutation under open field (OF) and greenhouse (GH) cultivation, and evaluated them for 52 morphological, agronomic, chemical properties, and chemical composition descriptors. All descriptors, except six morphological ones, were variable. The variety effect was the greatest contributor to variation for most morphological traits, as well as for fruit weight, fruit shape, dry matter, and soluble solids content. However, significant environmental and genotype × environment interaction were found for 36 and 42 descriptors, respectively. Fruits from GH plants had lower weight and firmness and were less red than those from OF. On average, in GH yield was 35% lower and daily fruit weight loss in post-harvest 41% higher than in OF. However, fruits from GH had on average higher dry matter and soluble solids contents, antioxidant activity, glucose, fructose, and ascorbic acid concentrations, but lower contents in lycopene and ß-carotene than those from OF. A principal components analysis clearly separated varieties according to the cultivation environment. However, the distribution pattern of varieties within each of the two clusters (GH and OF) was similar, despite the strong G × E interaction for many descriptors. Landraces from the same origin plotted in the same area of each cluster, and selections and hybrids plotted together with the landraces. The results reveal a high impact of the cultivation environment on morphological, agronomic, chemical properties, and chemical composition of Mediterranean long shelf-life traditional tomato varieties. This suggests that breeding programs specifically focused to adaptation to greenhouse conditions should be developed.
ABSTRACT
All regions of the US experience disasters which result in a number of negative public health consequences. Some populations have higher levels of social vulnerability and, thus, are more likely to experience negative impacts of disasters including emotional distress, loss of property, illness, and death. To mitigate the impact of disasters on at-risk populations, emergency managers must be aware of the social vulnerabilities within their community. This paper describes a qualitative study which aimed to understand how emergency managers identify social vulnerabilities, also referred to as at-risk populations, in their populations and barriers and facilitators to current approaches. Findings suggest that although public health tools have been developed to aid emergency managers in identifying at-risk populations, they are not being used consistently. Emergency managers requested more information on the availability of tools as well as guidance on how to increase ability to identify at-risk populations.
Subject(s)
Immunosuppressive Agents/therapeutic use , Isoxazoles/therapeutic use , Psoriasis/drug therapy , Adult , Dose-Response Relationship, Drug , Drug Administration Schedule , Female , Follow-Up Studies , Hand Dermatoses/diagnosis , Hand Dermatoses/drug therapy , Humans , Immunosuppressive Agents/adverse effects , Isoxazoles/adverse effects , Leflunomide , Psoriasis/diagnosis , Risk Assessment , Severity of Illness Index , Treatment OutcomeSubject(s)
Nipples/pathology , Sebaceous Gland Diseases/pathology , Adult , Female , Humans , Hyperplasia , Lip Diseases/pathologyABSTRACT
La violencia doméstica y sexual contra la mujer repercute de forma negativa en su salud. La depresión, la ansiedad y el trastorno por estrés postraumático son las consecuencias psicológicas más frecuentes. El objetivo de este trabajo se centra en el desarrollo de un instrumento que permita identificar el nivel de distrés emocional en situaciones de crisis. La muestra (N= 861) está formada por mujeres, entre 18 y 70 años, víctimas de violencia doméstica (n= 769) y violencia sexual (n= 92). El Cuestionario de Respuesta Emocional a la Violencia (REV) está formado por cuatro escalas que a través de 22 ítems informa sobre depresión, ansiedad, ajuste psicosocial y humor irritable. Los buenos índices de ajuste del modelo propuesto a priori para el Análisis Factorial Confirmatorio (AFC) determinan que es un instrumento adecuado de evaluación psicológica en situaciones críticas para ser utilizado en mujeres víctimas de violencia doméstica y/o sexual
Domestic and sexual violence against women has a negative impact on their health. The most frequent psychological consequences are depression, anxiety and post-traumatic stress disorder. The aim of this research was to develop an instrument to identify the level of emotional distress in a crisis situation. The sample (N= 861) includes women, between 18 and 70 years old, who had been victims of domestic (n= 769) and sexual violence (n= 92). The questionnaire Emotional Response to Violence Questionnaire (REV) was composed by 22 items that provide information on Depression, Anxiety, Psychological Adjustment and Irritability scales. The close fit of the model proposed a priori for Confirmatory Factor Analysis (CFA), showed that it constitute a suitable instrument for psychological evaluation in critical situations to be used with women who have been victims of domestic and/or sexual violence
Subject(s)
Female , Adult , Aged , Adolescent , Middle Aged , Humans , Spouse Abuse/psychology , Sex Offenses/psychology , Domestic Violence/psychology , Stress Disorders, Post-Traumatic/epidemiology , Depression/epidemiology , Affective Symptoms/epidemiology , Surveys and Questionnaires , Epidemiologic Studies , Anxiety Disorders/epidemiologyABSTRACT
La dermatomiositis juvenil es una enfermedad multisistémica de etiología desconocida que se caracteriza por una inflamación no supurativa de la piel y el músculo esquelético. La electromiografía y la biopsia muscular confirman el diagnóstico clínico, pero son técnicas invasivas. La resonancia magnética (RM) ha demostrado ser una herramienta útil para el diagnóstico de enfermedades musculares, aunque su especificidad es limitada. Los hallazgos de la RM pueden ser útiles para establecer el diagnóstico de esta enfermedad dentro del contexto clínico. Se presenta un caso clínico compatible con dermatomiositis juvenil y se revisa las aportaciones de la RM en el diagnóstico y seguimiento de la enfermedad (AU)