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1.
Mikrobiologiia ; 83(2): 236-44, 2014.
Article in Russian | MEDLINE | ID: mdl-25423727

ABSTRACT

Taxonomic diversity of fungi in the samples of the active layer of Antarctica was investigated using conventional microbiological techniques and metagenomic analysis of total DNA extracted from environmental samples. The list of Antarctic microscopic fungi was expanded, including detection of the species representing a portion of the fungal complex, which is nonculturable or sterile on conventional nutrient media.


Subject(s)
Fungi/isolation & purification , Geologic Sediments/microbiology , Adaptation, Physiological , Antarctic Regions , Biodiversity , DNA, Fungal , Fungi/classification , Fungi/genetics , Metagenome , Molecular Sequence Data
3.
FEBS Lett ; 584(19): 4193-6, 2010 Oct 08.
Article in English | MEDLINE | ID: mdl-20831870

ABSTRACT

The predicted Exigobacterium sibiricum bacterirhodopsin gene was amplified from an ancient Siberian permafrost sample. The protein bacteriorhodopsin from Exiguobacterium sibiricum (ESR) encoded by this gene was expressed in Escherichia coli membrane. ESR bound all-trans-retinal and displayed an absorbance maximum at 534nm without dark adaptation. The ESR photocycle is characterized by fast formation of an M intermediate and the presence of a significant amount of an O intermediate. Proteoliposomes with ESR incorporated transport protons in an outward direction leading to medium acidification. Proton uptake at the cytoplasmic surface of these organelles precedes proton release and coincides with M decay/O rise of the ESR.


Subject(s)
Bacillales/genetics , Bacillales/metabolism , Bacteriorhodopsins/genetics , Bacteriorhodopsins/metabolism , Proton Pumps/genetics , Proton Pumps/metabolism , Amino Acid Sequence , Arctic Regions , Bacillales/isolation & purification , Bacteriorhodopsins/chemistry , Base Sequence , Cloning, Molecular , DNA Primers/genetics , DNA, Bacterial/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , Genes, Bacterial , Molecular Sequence Data , Proton Pumps/chemistry , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Russia , Spectrophotometry
4.
Astrobiology ; 7(2): 275-311, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17480161

ABSTRACT

Antarctic permafrost soils have not received as much geocryological and biological study as has been devoted to the ice sheet, though the permafrost is more stable and older and inhabited by more microbes. This makes these soils potentially more informative and a more significant microbial repository than ice sheets. Due to the stability of the subsurface physicochemical regime, Antarctic permafrost is not an extreme environment but a balanced natural one. Up to 10(4) viable cells/g, whose age presumably corresponds to the longevity of the permanently frozen state of the sediments, have been isolated from Antarctic permafrost. Along with the microbes, metabolic by-products are preserved. This presumed natural cryopreservation makes it possible to observe what may be the oldest microbial communities on Earth. Here, we describe the Antarctic permafrost habitat and biodiversity and provide a model for martian ecosystems.


Subject(s)
Biodiversity , Exobiology , Soil Microbiology , Antarctic Regions , Ice , Water
6.
Zh Obshch Biol ; 64(2): 160-5, 2003.
Article in Russian | MEDLINE | ID: mdl-12723372

ABSTRACT

During the last decade a wide range of biological objects, which have preserved their viability for tens and hundreds of thousands of years, was found in the samples of permafrost sediments from North-East Eurasia. Among them are bacteria, fungi, algae, moss spores, seeds of higher plants, protists. Along with physiological mechanisms of cryoconservation and constant low temperature of great importance for long-term preservation of biological objects in permafrost layers are ways of burying the organisms and conditions that prevail before the transition of sediments to the permafrost state. The analysis of viability showed by preserved biological objects gives reasons to suppose that some representatives of Pleistocene biota buried in permafrost thickness may contribute to the biodiversity of present cryolite zone.


Subject(s)
Cryopreservation , Ecosystem , Freezing , Geologic Sediments , Ice , Seeds , Siberia , Soil
7.
Mikrobiologiia ; 70(3): 412-20, 2001.
Article in Russian | MEDLINE | ID: mdl-11450466

ABSTRACT

Almost all of the investigated samples of the Arctic and Antarctic permafrost sediments of different genesis with ages from 5-10 thousand to 2-3 million years were found to contain viable micromycete and bacterial cells. The maximum amounts of viable cells of fungi (up to 10(4) CFU/g air-dried sample) and bacteria (up to 10(7)-10(9) CFU/g air-dried sample) were present in fine peaty sediment samples taken from different depths. The identified micromycetes belonged to more than 20 genera of the divisions Basidiomycota, Ascomycota, and Zygomycota, and some represented mitosporic fungi. Thawing the samples at 35 and 52 degrees C allowed the number of detected fungal genera to be increased by more than 30%. Aerobic heterotrophic prokaryotes were dominated by coryneform, nocardioform, and spore-forming microorganisms of the order Actinomycetales. Analysis of the isolated fungi and actinomycetes showed that most of them originated from the microbial communities of ancient terrestrial biocenoses.


Subject(s)
Cryopreservation/methods , Gram-Positive Bacteria/isolation & purification , Antarctic Regions , Arctic Regions , Colony Count, Microbial , Gram-Positive Bacteria/classification
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