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1.
J Am Chem Soc ; 143(18): 6829-6835, 2021 05 12.
Article in English | MEDLINE | ID: mdl-33930268

ABSTRACT

The development of a flexible, component-based synthetic route to the amino sugar fragment of the lincosamide antibiotics is described. This route hinges on the application and extension of nitroaldol chemistry to forge strategic bonds within complex amino sugar targets and employs a glycal epoxide as a versatile glycosyl donor for the installation of anomeric groups. Through building-block exchange and late-stage functionalization, this route affords access to a host of rationally designed lincosamides otherwise inaccessible by semisynthesis and underpins a platform for the discovery of new lincosamide antibiotics.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Lincosamides/chemical synthesis , Anti-Bacterial Agents/chemistry , Lincosamides/chemistry , Molecular Conformation
2.
Science ; 366(6471)2019 12 13.
Article in English | MEDLINE | ID: mdl-31831640

ABSTRACT

The p27 protein is a canonical negative regulator of cell proliferation and acts primarily by inhibiting cyclin-dependent kinases (CDKs). Under some circumstances, p27 is associated with active CDK4, but no mechanism for activation has been described. We found that p27, when phosphorylated by tyrosine kinases, allosterically activated CDK4 in complex with cyclin D1 (CDK4-CycD1). Structural and biochemical data revealed that binding of phosphorylated p27 (phosp27) to CDK4 altered the kinase adenosine triphosphate site to promote phosphorylation of the retinoblastoma tumor suppressor protein (Rb) and other substrates. Surprisingly, purified and endogenous phosp27-CDK4-CycD1 complexes were insensitive to the CDK4-targeting drug palbociclib. Palbociclib instead primarily targeted monomeric CDK4 and CDK6 (CDK4/6) in breast tumor cells. Our data characterize phosp27-CDK4-CycD1 as an active Rb kinase that is refractory to clinically relevant CDK4/6 inhibitors.


Subject(s)
Cyclin-Dependent Kinase 4/antagonists & inhibitors , Cyclin-Dependent Kinase 4/metabolism , Cyclin-Dependent Kinase Inhibitor p27/metabolism , Piperazines/pharmacology , Protein Kinase Inhibitors/pharmacology , Pyridines/pharmacology , Allosteric Regulation , Antineoplastic Agents/pharmacology , Biocatalysis , Cell Line, Tumor , Crystallography, X-Ray , Cyclin D1/chemistry , Cyclin-Dependent Kinase 4/chemistry , Cyclin-Dependent Kinase Inhibitor p27/chemistry , Enzyme Activation , Humans , Phosphorylation , Protein Conformation , Retinoblastoma Protein/metabolism
3.
Metallomics ; 11(1): 183-200, 2019 01 23.
Article in English | MEDLINE | ID: mdl-30443649

ABSTRACT

Copper toxicity has been a long-term selection pressure on bacteria due to its presence in the environment and its use as an antimicrobial agent by grazing protozoa, by phagocytic cells of the immune system, and in man-made medical and commercial products. There is recent evidence that exposure to increased copper stress may have been a key driver in the evolution and spread of methicillin-resistant Staphylococcus aureus, a globally important pathogen that causes significant mortality and morbidity worldwide. Yet it is unclear how S. aureus physiology is affected by copper stress or how it adapts in order to be able to grow in the presence of excess copper. Here, we have determined quantitatively how S. aureus alters its proteome during growth under copper stress conditions, comparing this adaptive response in two different types of growth regime. We found that the adaptive response involves induction of the conserved copper detoxification system as well as induction of enzymes of central carbon metabolism, with only limited induction of proteins involved in the oxidative stress response. Further, we identified a protein that binds copper inside S. aureus cells when stressed by copper excess. This copper-binding enzyme, a glyceraldehyde-3-phosphate dehydrogenase essential for glycolysis, is inhibited by copper in vitro and inside S. aureus cells. Together, our data demonstrate that copper stress leads to the inhibition of glycolysis in S. aureus, and that the bacterium adapts to this stress by altering its central carbon utilisation pathways.


Subject(s)
Carbon/metabolism , Copper/metabolism , Staphylococcal Infections/microbiology , Staphylococcus aureus/growth & development , Anti-Infective Agents/metabolism , Bacterial Proteins/metabolism , Glyceraldehyde-3-Phosphate Dehydrogenases/metabolism , Humans , Oxidative Stress , Staphylococcus aureus/metabolism , Stress, Physiological
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