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1.
Int J Food Microbiol ; 187: 1-6, 2014 Sep 18.
Article in English | MEDLINE | ID: mdl-25033424

ABSTRACT

In April 2013, a food poisoning outbreak caused by staphylococcal enterotoxins (SEs) in ice-cream occurred in Freiburg, Germany, among the 31 participants of a christening party. Of the 13 cases, seven were hospitalized or obtained ambulatory treatment. Different types of ice-cream, which was freshly produced at the hotel where the party took place, were found to contain SE and high amounts of coagulase positive staphylococci. Enterotoxigenic Staphylococcus aureus strains isolated from ice-cream and human cases were of the same spa-type (t127), harboured the sea gene and displayed identical phenotypic resistance-, Fourier transform infrared spectroscopy- (FT-IR) and microarray-profiles. Despite the strong microbiological and epidemiological evidence of ice-cream being the incriminated food vehicle of the outbreak, a common source of S. aureus from the ice-cream could not be deduced. As none of the employees carried the outbreak strain, either the equipment used for the production of the ice-cream or a contaminated ingredient is the most likely introduction source.


Subject(s)
Disease Outbreaks , Food Microbiology , Ice Cream/microbiology , Staphylococcal Food Poisoning/epidemiology , Staphylococcal Food Poisoning/microbiology , Staphylococcus aureus/isolation & purification , Adolescent , Adult , Anti-Bacterial Agents/pharmacology , Child , Enterotoxins/genetics , Genotype , Germany/epidemiology , Humans , Phylogeny , Spectroscopy, Fourier Transform Infrared , Staphylococcus aureus/chemistry , Staphylococcus aureus/classification , Staphylococcus aureus/drug effects , Staphylococcus aureus/genetics
2.
Article in German | MEDLINE | ID: mdl-24920090

ABSTRACT

Staphylococcus (S.) aureus has been associated with septicaemia, mastitis, vaginitis, metritis, osteomyelitis, and endocarditis. This case report demonstrates S. aureus-induced septicaemia in suckling pig- lets. Three days after birth, littermates displayed severe ecchymosis and cyanosis, with a 50% mortality rate. The surviving littermates were cross-fostered, but died 1 day later. Other piglets, which were allowed to suck at the sow, developed similar clinical signs. Haematological findings were anaemia, thrombocytopenia, and leukopenia; therefore, neither isohaemolytic anaemia nor septicaemia could be excluded as differential diagnoses. At necropsy, petechial bleeding on inner organ surfaces and free blood in body cavities were found. Bacteriological examination of the sow's milk and of the spleen of one piglet detected a methicillin-resistent S. aureus strain (MRSA CC398), which was in all likelihood the cause of the disease. Potential differential diagnoses are discussed.


Subject(s)
Methicillin-Resistant Staphylococcus aureus/isolation & purification , Sepsis/veterinary , Staphylococcal Infections/veterinary , Swine Diseases/microbiology , Animals , Animals, Newborn , Sepsis/microbiology , Staphylococcal Infections/virology , Swine
3.
Article in German | MEDLINE | ID: mdl-23114436

ABSTRACT

Nosocomial infections caused by methicillin-resistant Staphylococcus aureus (MRSA) are a problem in hospital settings worldwide. The National Reference Centre for Staphylococci performs molecular typing on a representative sample set of MRSA isolates from German hospitals for assessing long-term trends thus following the dynamics of emergence and spread of MRSA clones. The article focuses on recent data concerning antibiotic resistance and epidemic MRSA in nosocomial settings and also reflects the impact of community-acquired MRSA and MRSA from zoonotic reservoirs. Identifying common and newly emerging clones is an on-going challenge in the changing epidemiology of MRSA and prevention of further spread needs molecular surveillance.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Community-Acquired Infections/epidemiology , Cross Infection/epidemiology , Epidemics , Methicillin-Resistant Staphylococcus aureus , Staphylococcal Infections/epidemiology , Community-Acquired Infections/microbiology , Community-Acquired Infections/prevention & control , Cross Infection/microbiology , Cross Infection/prevention & control , Cross-Cultural Comparison , Cross-Sectional Studies , Drug Resistance, Multiple, Bacterial/genetics , Epidemics/statistics & numerical data , Europe , Germany , Humans , Methicillin-Resistant Staphylococcus aureus/classification , Methicillin-Resistant Staphylococcus aureus/drug effects , Methicillin-Resistant Staphylococcus aureus/genetics , Microbial Sensitivity Tests , Molecular Typing , Population Surveillance , Serotyping , Staphylococcal Infections/microbiology , Staphylococcal Infections/prevention & control
5.
J Clin Microbiol ; 46(2): 574-81, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18032612

ABSTRACT

We determined the value of spa typing in combination with BURP (based upon repeat pattern) grouping analysis as a frontline tool in the epidemiological typing of Staphylococcus aureus, based on a random collection of 1,459 clinical isolates sent to the German Reference Centre for Staphylococci within a 6-month period. The application was found to be helpful for the classification of isolates into the particular clonal lineages currently prevalent in Germany. Due to its major advantages because of the ease of interpretation and the exchangeability of the results, the use of spa typing greatly simplifies communication between laboratories on both the national and the international levels. Thus, it is an excellent tool for national and international surveillance of S. aureus as well as for analysis of the short-term local epidemiology. However, to overcome the limitations of the BURP grouping method in terms of typing accuracy and discriminatory power, the results of the default BURP grouping method must be interpreted with caution. Additional markers, like staphylococcal chromosomal cassette mec, lineage-specific genes, or alternative DNA polymorphisms, are indispensable. They should be selected by dependence on the clonal lineage indicated by spa typing and subsequent BURP analysis as well as on the basis of the particular question to be addressed.


Subject(s)
Bacterial Typing Techniques , Molecular Epidemiology/methods , Staphylococcal Infections/microbiology , Staphylococcal Protein A/genetics , Staphylococcus aureus/classification , Cluster Analysis , DNA Fingerprinting , DNA, Bacterial/genetics , Electrophoresis, Gel, Pulsed-Field , Genotype , Germany/epidemiology , Humans , Polymorphism, Genetic , Staphylococcal Infections/epidemiology , Staphylococcus aureus/genetics
6.
J Clin Microbiol ; 46(2): 582-7, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18032620

ABSTRACT

The continuous spread of community-acquired methicillin-resistant Staphylococcus aureus (caMRSA) and the introduction of these highly virulent isolates into hospitals represent increasing threats. The timely recognition of caMRSA strains is crucial for infection control purposes. Thus, we developed a PCR-based assay for the easy and rapid determination of those caMRSA clones that currently are the most prevalent in Germany and Central Europe. This assay was able to correctly identify the majority of the isolates as caMRSA of sequence type 80 (ST80), clonal complex 1 (USA400), and ST8 (USA300). In combination with spa typing-BURP (based upon repeat pattern) analysis and resistance typing, it provides a means for the extensive characterization of suspicious isolates. Thus, this assay represents a reliable tool for monitoring the emergence and spread of different caMRSA clones. The resulting information, in combination with careful interpretation of the epidemiological records, might help to prevent the further spread of those highly virulent caMRSA clones.


Subject(s)
Community-Acquired Infections/microbiology , Molecular Epidemiology/methods , Polymerase Chain Reaction/methods , Staphylococcal Infections/diagnosis , Staphylococcal Infections/microbiology , Staphylococcus aureus/classification , Staphylococcus aureus/isolation & purification , Bacterial Typing Techniques/methods , Community-Acquired Infections/diagnosis , DNA Primers/genetics , Germany , Humans , Methicillin Resistance , Microbial Sensitivity Tests , Staphylococcus aureus/drug effects , Staphylococcus aureus/genetics
7.
J Hosp Infect ; 67(4): 316-22, 2007 Dec.
Article in English | MEDLINE | ID: mdl-18022286

ABSTRACT

Typing multiply-resistant bacteria using molecular techniques is high priority for national health authorities. Routine typing of meticillin-resistant Staphylococcus aureus (MRSA) was initiated in Austria 2005 and was performed by sequence analysis of the variable X region of protein A gene (spa), characterisation of the mec gene (SCCmec) and testing for Panton-Valentine leukocidin (PVL), enterotoxins, toxic shock syndrome toxin and the epidermolytic toxin genes. Ten different spa types, including newly identified t2023, were found among 66 clinical MRSA isolates originating from two neighbouring hospitals under the same management. Spa type t2023 was initially isolated in December 2005 from hospital A, where it became the dominant spa type during 2006 (nine of 16 isolates). The occurrence of type t2023 in hospital B remained a unique event and could be epidemiologically linked to a patient transferred from hospital A. Spa type t2023 is very similar to spa type t001. An isolate of spa type t001 from hospital A showed an enterotoxin gene pattern, multilocus sequence type (MLST) and SmaI macrorestriction PFGE pattern indistinguishable from that of t2023. Epidemiological differences suggested that infection control measures can prevent MRSA cross-transmission. Hospital B had a more stringent MRSA isolation policy, a higher nurse:patient ratio and provided more resources for infection control than hospital A.


Subject(s)
Cross Infection/epidemiology , Methicillin Resistance/genetics , Staphylococcal Infections/epidemiology , Staphylococcal Protein A/genetics , Staphylococcus aureus/drug effects , Austria , Bacterial Typing Techniques , Cross Infection/genetics , Cross Infection/microbiology , DNA Fingerprinting , DNA, Bacterial , Humans , Infection Control , Sentinel Surveillance , Staphylococcal Infections/genetics , Staphylococcal Protein A/classification , Staphylococcus aureus/classification , Staphylococcus aureus/genetics
8.
J Clin Microbiol ; 45(8): 2669-80, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17537946

ABSTRACT

Staphylococcus aureus is both a successful human commensal and a major pathogen. The elucidation of the molecular determinants of virulence, in particular assessment of the contributions of the genetic background versus those of mobile genetic elements (MGEs), has proved difficult in this variable species. To address this, we simultaneously determined the genetic backgrounds (spa typing) and the distributions of all 19 known superantigens and the exfoliative toxins A and D (multiplex PCR) as markers for MGEs. Methicillin- sensitive S. aureus strains from Pomerania, 107 nasal and 88 blood culture isolates, were investigated. All superantigen-encoding MGEs were linked more or less tightly to the genetic background. Thus, each S. aureus clonal complex was characterized by a typical repertoire of superantigen and exfoliative toxin genes. However, within each S. aureus clonal complex and even within the same spa type, virulence gene profiles varied remarkably. Therefore, virulence genes of nasal and blood culture isolates were separately compared in each clonal complex. The results indicated a role in infection for the MGE harboring the exfoliative toxin D gene. In contrast, there was no association of superantigen genes with bloodstream invasion. In summary, we show here that the simultaneous assessment of virulence gene profiles and the genetic background increases the discriminatory power of genetic investigations into the mechanisms of S. aureus pathogenesis.


Subject(s)
Bacterial Proteins/genetics , DNA, Bacterial/genetics , Staphylococcus aureus/genetics , Staphylococcus aureus/pathogenicity , Superantigens/genetics , Virulence Factors/genetics , Adult , Aged , Bacteremia/microbiology , Blood/microbiology , Carrier State/microbiology , DNA, Bacterial/chemistry , Female , Germany , Humans , Male , Middle Aged , Molecular Sequence Data , Nose/microbiology , Sequence Analysis, DNA , Staphylococcal Infections/microbiology
9.
J Clin Microbiol ; 44(7): 2533-40, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16825376

ABSTRACT

The implementation of the new clustering algorithm Based Upon Repeat Pattern (BURP) into the Ridom StaphType software tool enables clustering based on spa typing data for Staphylococcus aureus. We compared clustering results obtained by spa typing/BURP to those obtained by currently well-established methods, i.e., SmaI macrorestriction analysis and multilocus sequence typing/eBURST. A total of 99 clinical S. aureus strains, including MRSA and representing major clonal lineages associated with important kinds of infections which have been prevalent in Germany and Central Europe during the last 10 years, were used for comparison. SmaI macrorestriction analysis revealed the highest discriminatory power, and clustering results for all three methods resulted in concordance values ranging from 96.8% between the two sequence-based methods to 93.4% between spa typing/BURP and SmaI macrorestriction/cluster analysis. The results of this study indicate that spa typing, together with BURP clustering, is a useful tool in S. aureus epidemiology, especially because of ease of use and the advantages of unambiguous sequence analysis as well as reproducibility and exchange of typing data.


Subject(s)
Bacterial Typing Techniques , Molecular Epidemiology/methods , Staphylococcal Protein A/classification , Staphylococcal Protein A/genetics , Staphylococcus aureus/classification , Staphylococcus aureus/genetics , Cluster Analysis , DNA Fingerprinting , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , Deoxyribonucleases, Type II Site-Specific , Electrophoresis, Gel, Pulsed-Field , Genotype , Humans , Polymorphism, Restriction Fragment Length , Sequence Analysis, DNA , Staphylococcal Infections/microbiology
10.
Eur J Clin Microbiol Infect Dis ; 25(2): 104-7, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16498522

ABSTRACT

In order to expand current knowledge of the types of methicillin-resistant Staphylococcus aureus (MRSA) strains circulating in central Asia, six MRSA strains collected from hospitals in Ulaanbaatar, Mongolia during 2000-2002 were examined. Three strains possessed a staphylococcal cassette chromosome mec (SCCmec) element of type IV c, were sequence type (ST) 154 according to multilocus sequence typing (MLST), and contained lukS-lukF (Panton-Valentine leukocidin). Another three strains contained a SCCmec element of type III and were MLST type ST 239. Using automated ribotyping, the six MRSA strains were divided into four different EcoRI ribotypes, and two groups of isolates were distinguished by means of SmaI-macrorestriction patterns. In comparison to other countries, the incidence of MRSA in Mongolia is low.


Subject(s)
Methicillin Resistance , Staphylococcal Infections/epidemiology , Staphylococcal Infections/microbiology , Staphylococcus aureus/genetics , Staphylococcus aureus/physiology , Anti-Bacterial Agents/pharmacology , Genotype , Humans , Molecular Epidemiology , Mongolia/epidemiology , Phenotype , Staphylococcus aureus/drug effects , Staphylococcus aureus/isolation & purification
11.
J Clin Microbiol ; 44(2): 619-21, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16455927

ABSTRACT

Current DNA amplification-based typing methods for bacterial pathogens often lack interlaboratory reproducibility. In this international study, DNA sequence-based typing of the Staphylococcus aureus protein A gene (spa, 110 to 422 bp) showed 100% intra- and interlaboratory reproducibility without extensive harmonization of protocols for 30 blind-coded S. aureus DNA samples sent to 10 laboratories. Specialized software for automated sequence analysis ensured a common typing nomenclature.


Subject(s)
Bacterial Typing Techniques , Sequence Analysis, DNA , Staphylococcal Protein A/genetics , Staphylococcus aureus/classification , Bacterial Typing Techniques/methods , Bacterial Typing Techniques/statistics & numerical data , DNA, Bacterial/analysis , Humans , Laboratories , Observer Variation , Reproducibility of Results , Sequence Analysis, DNA/methods , Sequence Analysis, DNA/statistics & numerical data , Software , Staphylococcal Infections/microbiology , Staphylococcus aureus/genetics
12.
Euro Surveill ; 11(1): 44-7, 2006.
Article in English | MEDLINE | ID: mdl-16484728

ABSTRACT

Methicillin-resistant Staphylococcus aureus has become an emerging public health problem worldwide, no longer only associated with healthcare-associated infections. With the exception of some recent reports concerning infections in cats, dogs and horses, infections with MRSA in companion animals have been infrequently reported. Here we submit findings for MRSA infections in horses in a central European university hospital.


Subject(s)
Horse Diseases/epidemiology , Hospitals, Animal/statistics & numerical data , Methicillin Resistance , Population Surveillance , Staphylococcal Infections/veterinary , Staphylococcus aureus/physiology , Animals , Carrier State , Disease Reservoirs , Europe/epidemiology , Health Personnel , Horses/microbiology , Humans , Incidence , Nasal Cavity/microbiology , Staphylococcal Infections/transmission , Staphylococcus aureus/classification , Staphylococcus aureus/isolation & purification
15.
Eur J Clin Microbiol Infect Dis ; 24(6): 419-22, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15937659

ABSTRACT

In response to several isolations of methicillin-resistant Staphylococcus aureus carrying the Panton-Valentine leucocidin gene (PVL-MRSA), the present study was conducted to document the spread of infection in a small region of southeastern Germany. During a 9-month period, two healthcare-associated outbreaks with PVL-MRSA occurred, affecting 83 patients, personnel and contacts of personnel, and 34 additional cases were detected in the community. The clinical spectrum ranged from colonization to skin infection and necrotizing pneumonia. The findings represent the largest number of PVL-MRSA cases detected in Germany so far, and demonstrate the potential of this emerging pathogen to spread within the community and in healthcare institutions.


Subject(s)
Community-Acquired Infections/microbiology , Cross Infection/microbiology , Leukocidins/genetics , Staphylococcal Infections/epidemiology , Staphylococcal Infections/microbiology , Staphylococcus aureus/genetics , Adolescent , Adult , Aged , Aged, 80 and over , Bacterial Toxins , Child , Child, Preschool , Community-Acquired Infections/epidemiology , Cross Infection/epidemiology , Disease Outbreaks , Exotoxins , Female , Germany/epidemiology , Humans , Infant , Male , Methicillin Resistance/genetics , Middle Aged , Staphylococcus aureus/drug effects
16.
Eur J Clin Microbiol Infect Dis ; 24(1): 1-5, 2005 Jan.
Article in English | MEDLINE | ID: mdl-15599784

ABSTRACT

The aim of the present study was to investigate strains of methicillin-resistant Staphylococcus aureus (MRSA) for the presence of the lukS-lukF determinant of Panton-Valentine leukocidin and to further characterize strains found to contain the genes. During the past 2 years, MRSA containing the lukS-lukF genes for Panton-Valentine leukocidin, particularly those emerging outside of hospitals, have become of interest. MRSA strains sent to the national reference center in Germany were investigated for lukS-lukF by polymerase chain reaction (PCR). If the presence of lukS-lukF was demonstrated, strains were further characterized by molecular typing (determination of SmaI pattern, spa sequence, and multilocus sequence type), PCR demonstration of resistance genes, and characterization of the SCCmec element. Since the end of 2002, MRSA containing Panton-Valentine leukocidin genes have been demonstrated as the causative agent of 28 cases of infection (9 community-acquired cases, 19 sporadic nosocomial cases) in different areas of Germany. Twenty-seven of these 28 isolates exhibited a unique pattern of genomic typing: all exhibited multilocus sequence type 80, spa sequence type 44, and a SmaI macrorestriction pattern that corresponds to a community-acquired strain of MRSA from France and Switzerland. In addition to resistance to oxacillin, the strains exhibited resistance to ciprofloxacin, tetracycline (tetM), and fusidic acid, the last of which is encoded by the far-1 gene. The far-1 gene was shown to be located on the plasmid. One isolate corresponded to community MRSA (cMRSA) of multilocus sequence type 1 from the USA.


Subject(s)
Anti-Bacterial Agents/pharmacology , Leukocidins/genetics , Methicillin Resistance , Staphylococcus aureus/drug effects , Staphylococcus aureus/genetics , Bacterial Toxins , Bacterial Typing Techniques , Base Sequence , Communicable Diseases, Emerging/epidemiology , DNA, Bacterial/analysis , Exotoxins , Genes, Bacterial , Germany/epidemiology , Humans , Microbial Sensitivity Tests , Molecular Epidemiology , Molecular Sequence Data , Phenotype , Polymerase Chain Reaction , Sampling Studies , Sensitivity and Specificity , Staphylococcal Infections/diagnosis , Staphylococcal Infections/drug therapy , Staphylococcal Infections/epidemiology , Staphylococcus aureus/classification
17.
Article in German | MEDLINE | ID: mdl-15205778

ABSTRACT

For use in human chemotherapy, there are several different substances for nearly each substance group available which cannot all be checked in routine susceptibility testing. If the bacterial resistance mechanisms and cross-resistance conferred by them are known, particular test substances can be selected and the results are interpreted on the basis of cross-resistance. Test substances correspond to those mentioned in guidelines for section sign 23 IfSG (German law on protection against infection). Due to suboptimal in vitro expression of different resistance mechanisms, it is necessary to perform additional tests besides routine agar-diffusion or microbroth MIC assays. These are preferentially tests for molecular demonstration of resistance genes. Emergence and spread of antibiotic-resistant nosocomial pathogens can be traced by typing. When selecting a typing method, it is important to assess work load, discriminatory power, and reproducibility. In future the availability of microarray technology will enable routine laboratories to demonstrate particular virulence-associated traits.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacteria/drug effects , Cross Infection/microbiology , Drug Resistance, Bacterial , Microbial Sensitivity Tests/methods , Anti-Bacterial Agents/therapeutic use , Bacteria/genetics , Bacteria/pathogenicity , Bacterial Typing Techniques , Cross Infection/diagnosis , Cross Infection/drug therapy , Drug Resistance, Bacterial/genetics , Drug Resistance, Multiple, Bacterial , Genotype , Humans , Oligonucleotide Array Sequence Analysis , Phenotype , Polymerase Chain Reaction , Virulence
18.
Euro Surveill ; 9(1): 16-8, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14762317

ABSTRACT

Analysis of community-acquired methicillin-resistant Staphylococcus aureus (c-MRSA) from Germany producing the Panton-Valentine leukocidin revealed a unique SmaI-macrorestriction pattern, different from epidemic nosocomial strains. This molecular pattern corresponds to those shown in c-MRSA strains from other countries in the European Union. All isolates exhibited resistance to fusidic acid, which is coded by the far-1 gene. From data on geographical dissemination and time of occurrence, this strain appears to have emerged in Germany in the second half of 2002, and so an already wider dissemination is likely. The emergence of MRSA with resistance to fusidic acid is a first sign of the emergence of a PVL-positive MRSA clone.


Subject(s)
Community-Acquired Infections/classification , Methicillin Resistance , Staphylococcal Infections/classification , Staphylococcus aureus/classification , Anti-Bacterial Agents/metabolism , Bacterial Toxins , Bacterial Typing Techniques/methods , Community-Acquired Infections/drug therapy , Community-Acquired Infections/epidemiology , Drug Resistance, Multiple, Bacterial/genetics , Exotoxins , Fusidic Acid/metabolism , Genes, Bacterial/genetics , Genes, MDR/genetics , Germany/epidemiology , Humans , Leukocidins/biosynthesis , Staphylococcal Infections/drug therapy , Staphylococcal Infections/epidemiology , Staphylococcus aureus/drug effects , Staphylococcus aureus/genetics , Staphylococcus aureus/isolation & purification
19.
Eur J Clin Microbiol Infect Dis ; 23(1): 15-9, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14652782

ABSTRACT

During the past 8 years, changes in the prevalence and spread of different epidemic methicillin-resistant Staphylococcus aureus (MRSA) have been observed in central Europe, with the emergence of new strains possessing fewer resistance characters. This has also been demonstrated at the level of particular hospitals. Since variation in agr specificity type has been proposed as a possible reason for population dynamics in Staphylococcus aureus, the agr specificity groups of different epidemic MRSA strains were investigated by PCR using agr group-specific primers. Four of the "old" as well as two "new" epidemic strains exhibited agr specificity group I. One group of epidemic MRSA strains, which has been observed since the beginning of the 1990s, exhibited the agr specificity group II. Sequencing the variable part ( agrB-D-C) of the agr locus revealed only six relevant nucleotide changes within this region, with three of them modifying the Shine-Dalgarno sequence region of agrC. On the basis of the results obtained, it is proposed that the dynamics observed in the population of MRSA in Germany is not due to different agr group specificities in "old" and "new" epidemic clones.


Subject(s)
Methicillin Resistance/genetics , Polymorphism, Genetic , Staphylococcal Infections/epidemiology , Staphylococcus aureus/drug effects , Staphylococcus aureus/genetics , Bacterial Proteins/genetics , Base Sequence , Cohort Studies , Drug Resistance, Bacterial , Electrophoresis, Gel, Pulsed-Field , Europe/epidemiology , Female , Genes, Bacterial , Germany/epidemiology , Humans , Male , Microbial Sensitivity Tests , Molecular Sequence Data , Peptides, Cyclic , Polymerase Chain Reaction , Prevalence , Risk Factors , Staphylococcal Infections/drug therapy , Staphylococcus aureus/pathogenicity
20.
FEMS Microbiol Lett ; 196(1): 31-7, 2001 Mar 01.
Article in English | MEDLINE | ID: mdl-11257544

ABSTRACT

A novel Mycobacterium avium ssp. paratuberculosis (M. paratuberculosis) specific insertion sequence has been identified by representational difference analysis and designated as ISMav2. ISMav2 has no similarity to known mycobacterial IS elements but shows more than 50% identity to a non-composite transposon of Streptomyces coelicolor at the DNA and protein level. ISMav2 is present in at least three copies on the genome as assessed by Southern blot analysis and its potential value as a diagnostic tool was confirmed by PCR analyses on 79 M. paratuberculosis field isolates, nine M. avium ssp. avium isolates, and the reference strains of nine other mycobacterial species.


Subject(s)
DNA Transposable Elements , Mycobacterium avium subsp. paratuberculosis/genetics , Base Sequence , Cloning, Molecular , DNA Restriction Enzymes , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , Molecular Sequence Data , Mycobacterium avium subsp. paratuberculosis/classification , Mycobacterium avium subsp. paratuberculosis/isolation & purification , Polymerase Chain Reaction , Repetitive Sequences, Nucleic Acid , Streptomyces/genetics , Transposases/chemistry
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