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1.
Biofizika ; 45(4): 600-10, 2000.
Article in Russian | MEDLINE | ID: mdl-11040965

ABSTRACT

Differential UV spectra of DNA and its monomers that were induced by Ag+ ions were measured, and the effect of ions on the parameters of the helix-coil transition was studied. The data obtained confirm the existence of "strong" and "weak" modes of binding of Ag+ to DNA. The earlier proposed proton transfer from N1G to N3C, which is determined by the interaction of Ag+ with N7G (a "strong" complex), follows immediately from the shape of the differential UV spectra. The positive cooperativity of the binding of Ag+ to DNA upon the formation of a "weak" complex is due to the cooperativity of the transition of DNA to a new double-helical conformation. A model of this conformation is proposed which suggests the formation of Hougsteen GC and AT pairs.


Subject(s)
DNA/chemistry , Silver/chemistry , Cations, Monovalent , Spectrophotometry, Ultraviolet
2.
Biofizika ; 44(2): 208-15, 1999.
Article in Russian | MEDLINE | ID: mdl-10418671

ABSTRACT

The interaction of Ag+ ions with ribonucleotides of canonical bases in aqueous solution was studied by differential UV spectroscopy. Atoms coordinating silver ions (N7, O6 of guanosine 5'-monophosphate, N3, O2 of cytidine 5'-monophosphate, N7, N1, N3 of adenosine 5'-monophosphate and N3 of uridine 5'-monophosphate) and the binding constants characterizing the formation of appropriate complexes were determined. The differences in the relative affinity of Ag+ ions for the atoms of nucleotide bases correlate with the potential on them.


Subject(s)
Ribonucleotides/chemistry , Silver/chemistry , Adenosine Monophosphate/chemistry , Cytidine Monophosphate/chemistry , Guanosine Monophosphate/chemistry , Spectrophotometry, Ultraviolet , Uridine Monophosphate/chemistry
3.
Biofizika ; 42(1): 105-16, 1997.
Article in Russian | MEDLINE | ID: mdl-9181783

ABSTRACT

Complex formation of Cd2+ ions with 2'-deoxy-5'-phosphates of canonical bases and their riboanalogues in water solution is studied by the method of differential UV-spectroscopy. It is stated that the atoms coordinating Cd2+ in complexes are N7 of dGMP and GMP, dAMP and AMP, N1 of adenine derivatives, N3 of dCMP. No interaction with base heteroatoms of UMP and dTMP is found. O2' present in the structure of the sugar ring has a weak influence on the Cd2+ ion binding to purine nucleotides. It manifests itself strongly in the complexes with cytosine derivatives: cadmium does not interact with N3 of CMP and poly-C practically. In the last case O2 is a centre coordinating Cd2+ ions. The interaction with this atom induces the melting of polynucleotide helical parts. At the high cadmium concentration poly-C forms compact particles. The main centre binding Cd2+ ions in DNA is N7 of guanines. Noncooperative interaction with these centres results in the internal protonation of N3C of GC-pairs. This is not followed with the disordering of the DNA helical structure.


Subject(s)
Cadmium/chemistry , DNA/chemistry , Nucleotides/chemistry , Cations, Divalent/chemistry , Solutions , Spectrophotometry, Ultraviolet , Thymidine Monophosphate/chemistry , Uridine Monophosphate/chemistry
4.
J Inorg Biochem ; 63(2): 79-98, 1996 Aug 01.
Article in English | MEDLINE | ID: mdl-8699177

ABSTRACT

UV differential spectroscopy is applied to study the interaction of Cu2+, Ni2+, Mn2+ ions with deoxyribonucleotides of canonic bases (dGMP, dAMP, dCMP, dTMP) and native DNA. Heteroatoms of the bases, coordinating ions, and binding constants which characterize the formation of metal complexes are found. The affinity of the ions is lower for the deoxyribonucleotide bases than for the ribonucleotide ones. This indicates that 02' of ribose participates in the stabilization of the metal complex even under conditions close to the neutral one (pH 6). Unlike the Cu2+ ions, Ni2+ and Mn2+ ions do not interact with N3C both in monomers and polymers. This seems to be the main factor explaining why copper makes DNA transform into a structure with a quasi-Hoogsteen pairing of GC pairs. No transformations of this kind of helix-coil transitions are caused by manganese and nickel up to concentrations 4 X 10(-2) M.


Subject(s)
Copper/analysis , DNA/chemistry , Deoxyribonucleotides/chemistry , Manganese/analysis , Nickel/analysis , Ribonucleotides/chemistry , Deoxyadenine Nucleotides/chemistry , Deoxycytidine Monophosphate/chemistry , Deoxyguanine Nucleotides/chemistry , Molecular Structure , Nucleic Acid Conformation , Thymidine Monophosphate/chemistry
5.
Fiziol Zh (1994) ; 40(2): 82-7, 1994.
Article in Ukrainian | MEDLINE | ID: mdl-7758610

ABSTRACT

Nitrobenzene, o-nitrochlorobenzene and p-nitrochlorobenzene were studied in experiments with rats for their effect on intensity of lipid peroxidation (LPO), antioxidative activity (AOA), vitamin E content in the spleen and liver tissues as well as on certain hematological parameters of animals. These substances, when applied in acute experiments, deteriorate hematological parameters, intensify LPO in the spleen tissues. In this case AOA and vitamin E concentration grow. Subchronic action promotes stabilization of the studied parameters, which testifies to active adaptation of the organism to action of the above xenobiotics, as well as to high significance of the antioxidative homeostasis regulation system in the process.


Subject(s)
Antioxidants/metabolism , Homeostasis/drug effects , Lipid Peroxidation/drug effects , Liver/drug effects , Nitrobenzenes/pharmacology , Spleen/drug effects , Vitamin E/metabolism , Animals , Liver/metabolism , Male , Rats , Spleen/metabolism
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